RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 LRRC10BA6NIK2 292 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 SMTNL1A8MU46 457 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 PRR5-ARHGAP8B1AHC4 643 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 SYNCRIPO60506 623 aaKnown RBP23.41■■□□□ 1.34
CCDC9-204ENST00000599398 TACR2P21452 398 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 CCR1P32246 355 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 CD70P32970 193 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 NOS2P35228 1153 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 MPLP40238 635 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 DHPSP49366 369 aaPredicted RBP23.41■■□□□ 1.34
CCDC9-204ENST00000599398 JAM2P57087 298 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 ARHGAP8P85298 464 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 RSPO4Q2I0M5 234 aaPredicted RBP23.41■■□□□ 1.34
CCDC9-204ENST00000599398 MAP7D1Q3KQU3 841 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 FAM102AQ5T9C2 384 aaPredicted RBP23.41■■□□□ 1.34
CCDC9-204ENST00000599398 NAA35Q5VZE5 725 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 KIAA1324Q6UXG2 1013 aaKnown RBP23.41■■□□□ 1.34
CCDC9-204ENST00000599398 ZNF677Q86XU0 584 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 ZNF397Q8NF99 534 aaPredicted RBP23.41■■□□□ 1.34
CCDC9-204ENST00000599398 CYB5D2Q8WUJ1 264 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 CPA5Q8WXQ8 436 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 BPIFA3Q9BQP9 254 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 SLC6A17Q9H1V8 727 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 CD248Q9HCU0 757 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 NOCTQ9UK39 431 aaKnown RBP23.41■■□□□ 1.34
CCDC9-204ENST00000599398 PLA2G4CQ9UP65 541 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 DCHS1Q96JQ0 3298 aa23.4■■□□□ 1.34
CCDC9-204ENST00000599398 KCNU1A8MYU2 1149 aa23.4■■□□□ 1.34
CCDC9-204ENST00000599398 F5H5T6 163 aa23.4■■□□□ 1.34
CCDC9-204ENST00000599398 M0QYT0 321 aa23.4■■□□□ 1.34
CCDC9-204ENST00000599398 GABRB2P47870 512 aa23.4■■□□□ 1.34
CCDC9-204ENST00000599398 EIF4EBP2Q13542 120 aaPredicted RBP23.4■■□□□ 1.34
CCDC9-204ENST00000599398 CDH18Q13634 790 aa23.4■■□□□ 1.34
CCDC9-204ENST00000599398 FUT11Q495W5 492 aa23.4■■□□□ 1.34
CCDC9-204ENST00000599398 FNDC3BQ53EP0 1204 aaKnown RBP23.4■■□□□ 1.34
CCDC9-204ENST00000599398 C2CD6Q53TS8 623 aa23.4■■□□□ 1.34
CCDC9-204ENST00000599398 MBLAC2Q68D91 279 aa23.4■■□□□ 1.34
CCDC9-204ENST00000599398 RNF43Q68DV7 783 aa23.4■■□□□ 1.34
CCDC9-204ENST00000599398 LPCAT2Q7L5N7 544 aa23.4■■□□□ 1.34
CCDC9-204ENST00000599398 APTXQ7Z2E3 356 aaKnown RBP23.4■■□□□ 1.34
CCDC9-204ENST00000599398 XYLT1Q86Y38 959 aa23.4■■□□□ 1.34
CCDC9-204ENST00000599398 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.4■■□□□ 1.34
CCDC9-204ENST00000599398 C12orf50Q8NA57 414 aaPredicted RBP23.4■■□□□ 1.34
CCDC9-204ENST00000599398 ERGIC2Q96RQ1 377 aa23.4■■□□□ 1.34
CCDC9-204ENST00000599398 SMOC1Q9H4F8 434 aa23.4■■□□□ 1.34
CCDC9-204ENST00000599398 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.4■■□□□ 1.34
CCDC9-204ENST00000599398 MBD1Q9UIS9 605 aaPredicted RBP23.4■■□□□ 1.34
CCDC9-204ENST00000599398 STAP1Q9ULZ2 295 aa23.4■■□□□ 1.34
CCDC9-204ENST00000599398 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.39■■□□□ 1.33
CCDC9-204ENST00000599398 GOLGA8SH3BPF8 625 aa23.39■■□□□ 1.33
CCDC9-204ENST00000599398 FOXD2O60548 495 aaPredicted RBP23.39■■□□□ 1.33
CCDC9-204ENST00000599398 EPHX1P07099 455 aa23.39■■□□□ 1.33
CCDC9-204ENST00000599398 ZNF806P0C7X5 589 aa23.39■■□□□ 1.33
CCDC9-204ENST00000599398 POLR2EP19388 210 aaKnown RBP23.39■■□□□ 1.33
CCDC9-204ENST00000599398 PRKCHP24723 683 aa23.39■■□□□ 1.33
CCDC9-204ENST00000599398 MATKP42679 507 aa23.39■■□□□ 1.33
CCDC9-204ENST00000599398 ZNF165P49910 485 aa23.39■■□□□ 1.33
CCDC9-204ENST00000599398 NOMO3P69849 1222 aa23.39■■□□□ 1.33
CCDC9-204ENST00000599398 CDR2Q01850 454 aa23.39■■□□□ 1.33
CCDC9-204ENST00000599398 ENPP2Q13822 863 aa23.39■■□□□ 1.33
CCDC9-204ENST00000599398 SF3A2Q15428 464 aaKnown RBP23.39■■□□□ 1.33
CCDC9-204ENST00000599398 ADIPOR2Q86V24 386 aa23.39■■□□□ 1.33
CCDC9-204ENST00000599398 DHX40Q8IX18 779 aaKnown RBP23.39■■□□□ 1.33
CCDC9-204ENST00000599398 TMEFF1Q8IYR6 380 aa23.39■■□□□ 1.33
CCDC9-204ENST00000599398 FIBINQ8TAL6 211 aa23.39■■□□□ 1.33
CCDC9-204ENST00000599398 MRGPRX1Q96LB2 322 aa23.39■■□□□ 1.33
CCDC9-204ENST00000599398 CDV3Q9UKY7 258 aaKnown RBP23.39■■□□□ 1.33
CCDC9-204ENST00000599398 CYP8B1Q9UNU6 501 aa23.39■■□□□ 1.33
CCDC9-204ENST00000599398 CKAP5Q14008 2032 aa23.38■■□□□ 1.33
CCDC9-204ENST00000599398 CEP192Q8TEP8 1941 aa23.38■■□□□ 1.33
CCDC9-204ENST00000599398 H0Y626 953 aa23.38■■□□□ 1.33
CCDC9-204ENST00000599398 ZNF217O75362 1048 aa23.38■■□□□ 1.33
CCDC9-204ENST00000599398 LUC7L3O95232 432 aaKnown RBP23.38■■□□□ 1.33
CCDC9-204ENST00000599398 CAVIN2O95810 425 aa23.38■■□□□ 1.33
CCDC9-204ENST00000599398 ATP5BP06576 529 aaKnown RBP23.38■■□□□ 1.33
CCDC9-204ENST00000599398 HLA-EP13747 358 aa23.38■■□□□ 1.33
CCDC9-204ENST00000599398 SULT1E1P49888 294 aa23.38■■□□□ 1.33
CCDC9-204ENST00000599398 LMAN2Q12907 356 aa23.38■■□□□ 1.33
CCDC9-204ENST00000599398 AASDHQ4L235 1098 aaPredicted RBP23.38■■□□□ 1.33
CCDC9-204ENST00000599398 ARMCX6Q7L4S7 300 aa23.38■■□□□ 1.33
CCDC9-204ENST00000599398 CYP2U1Q7Z449 544 aa23.38■■□□□ 1.33
CCDC9-204ENST00000599398 KIAA0907Q7Z7F0 614 aaPredicted RBP23.38■■□□□ 1.33
CCDC9-204ENST00000599398 PRDM16Q9HAZ2 1276 aa23.38■■□□□ 1.33
CCDC9-204ENST00000599398 VPS45Q9NRW7 570 aa23.38■■□□□ 1.33
CCDC9-204ENST00000599398 RRN3Q9NYV6 651 aa23.38■■□□□ 1.33
CCDC9-204ENST00000599398 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.37■■□□□ 1.33
CCDC9-204ENST00000599398 BCLAF3A2AJT9 711 aaKnown RBP23.37■■□□□ 1.33
CCDC9-204ENST00000599398 DLDP09622 509 aaKnown RBP23.37■■□□□ 1.33
CCDC9-204ENST00000599398 SDHBP21912 280 aa23.37■■□□□ 1.33
CCDC9-204ENST00000599398 SCNN1AP37088 669 aa23.37■■□□□ 1.33
CCDC9-204ENST00000599398 FMO1Q01740 532 aa23.37■■□□□ 1.33
CCDC9-204ENST00000599398 PUM1Q14671 1186 aaKnown RBP eCLIP23.37■■□□□ 1.33
CCDC9-204ENST00000599398 KLHL40Q2TBA0 621 aa23.37■■□□□ 1.33
CCDC9-204ENST00000599398 SLC36A4Q6YBV0 504 aa23.37■■□□□ 1.33
CCDC9-204ENST00000599398 SND1Q7KZF4 910 aaKnown RBP eCLIP23.37■■□□□ 1.33
CCDC9-204ENST00000599398 NPY6RQ99463 290 aa23.37■■□□□ 1.33
CCDC9-204ENST00000599398 SYCE3A1L190 88 aa23.36■■□□□ 1.33
CCDC9-204ENST00000599398 CHRNB2P17787 502 aa23.36■■□□□ 1.33
CCDC9-204ENST00000599398 RPL6Q02878 288 aaKnown RBP23.36■■□□□ 1.33
CCDC9-204ENST00000599398 FSCBQ5H9T9 825 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms