RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 CNPY3Q9BT09 278 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 RAB6CQ9H0N0 254 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 ARHGEF4Q9NR80 690 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 CTTNBP2NLQ9P2B4 639 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 DEC1Q9P2X7 70 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 MIA3Q5JRA6 1907 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 APODP05090 189 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 CASQ1P31415 396 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 OPRD1P41143 372 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 SGSHP51688 502 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 VAV2P52735 878 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 LRRC32Q14392 662 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 ARL13BQ3SXY8 428 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 C10orf76Q5T2E6 689 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 STRADAQ7RTN6 431 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 BMP8AQ7Z5Y6 402 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 KIAA1328Q86T90 577 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 CCDC117Q8IWD4 279 aaPredicted RBP20.81■□□□□ 0.92
IRF3-221ENST00000598808 HJURPQ8NCD3 748 aaPredicted RBP20.81■□□□□ 0.92
IRF3-221ENST00000598808 PNKPQ96T60 521 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 TRIM7Q9C029 511 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 L2HGDHQ9H9P8 463 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 TMPRSS4Q9NRS4 437 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 RBM12Q9NTZ6 932 aaKnown RBP20.81■□□□□ 0.92
IRF3-221ENST00000598808 MARK1Q9P0L2 795 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 DNAI1Q9UI46 699 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 STOML2Q9UJZ1 356 aa20.81■□□□□ 0.92
IRF3-221ENST00000598808 TULP3O75386 442 aa20.8■□□□□ 0.92
IRF3-221ENST00000598808 AOC1P19801 751 aa20.8■□□□□ 0.92
IRF3-221ENST00000598808 SEC13P55735 322 aa20.8■□□□□ 0.92
IRF3-221ENST00000598808 OGDHQ02218 1023 aa20.8■□□□□ 0.92
IRF3-221ENST00000598808 MTA1Q13330 715 aa20.8■□□□□ 0.92
IRF3-221ENST00000598808 GAB4Q2WGN9 574 aa20.8■□□□□ 0.92
IRF3-221ENST00000598808 MS4A13Q5J8X5 152 aa20.8■□□□□ 0.92
IRF3-221ENST00000598808 PIK3R6Q5UE93 754 aa20.8■□□□□ 0.92
IRF3-221ENST00000598808 FYB2Q5VWT5 728 aa20.8■□□□□ 0.92
IRF3-221ENST00000598808 FAM217AQ8IXS0 508 aa20.8■□□□□ 0.92
IRF3-221ENST00000598808 CCDC105Q8IYK2 499 aa20.8■□□□□ 0.92
IRF3-221ENST00000598808 CFAP52Q8N1V2 620 aa20.8■□□□□ 0.92
IRF3-221ENST00000598808 PRICKLE1Q96MT3 831 aaPredicted RBP20.8■□□□□ 0.92
IRF3-221ENST00000598808 LMAN1LQ9HAT1 526 aa20.8■□□□□ 0.92
IRF3-221ENST00000598808 ARHGEF38Q9NXL2 777 aa20.8■□□□□ 0.92
IRF3-221ENST00000598808 ANAPC7Q9UJX3 599 aa20.8■□□□□ 0.92
IRF3-221ENST00000598808 VANGL2Q9ULK5 521 aa20.8■□□□□ 0.92
IRF3-221ENST00000598808 NENFQ9UMX5 172 aa20.8■□□□□ 0.92
IRF3-221ENST00000598808 REXO2Q9Y3B8 237 aaKnown RBP20.8■□□□□ 0.92
IRF3-221ENST00000598808 SNX10Q9Y5X0 201 aa20.8■□□□□ 0.92
IRF3-221ENST00000598808 HS3ST4Q9Y661 456 aa20.8■□□□□ 0.92
IRF3-221ENST00000598808 F5P12259 2224 aa20.79■□□□□ 0.92
IRF3-221ENST00000598808 TMEM191CA6NGB0 347 aa20.79■□□□□ 0.92
IRF3-221ENST00000598808 SHISA7A6NL88 538 aa20.79■□□□□ 0.92
IRF3-221ENST00000598808 PI15O43692 258 aa20.79■□□□□ 0.92
IRF3-221ENST00000598808 CACNG3O60359 315 aa20.79■□□□□ 0.92
IRF3-221ENST00000598808 EGFP01133 1207 aa20.79■□□□□ 0.92
IRF3-221ENST00000598808 CYP1A2P05177 515 aa20.79■□□□□ 0.92
IRF3-221ENST00000598808 ARHGAP25P42331 645 aa20.79■□□□□ 0.92
IRF3-221ENST00000598808 DGKGP49619 791 aa20.79■□□□□ 0.92
IRF3-221ENST00000598808 HDAC4P56524 1084 aa20.79■□□□□ 0.92
IRF3-221ENST00000598808 KIF5AQ12840 1032 aa20.79■□□□□ 0.92
IRF3-221ENST00000598808 EIF4EBP2Q13542 120 aaPredicted RBP20.79■□□□□ 0.92
IRF3-221ENST00000598808 RABGAP1LQ5R372 815 aa20.79■□□□□ 0.92
IRF3-221ENST00000598808 FSTL4Q6MZW2 842 aa20.79■□□□□ 0.92
IRF3-221ENST00000598808 CARNMT1Q8N4J0 409 aa20.79■□□□□ 0.92
IRF3-221ENST00000598808 ZNF564Q8TBZ8 553 aaPredicted RBP20.79■□□□□ 0.92
IRF3-221ENST00000598808 BTBD6Q96KE9 485 aa20.79■□□□□ 0.92
IRF3-221ENST00000598808 RPRD1AQ96P16 312 aaPredicted RBP20.79■□□□□ 0.92
IRF3-221ENST00000598808 FBRSL1Q9HCM7 1045 aaKnown RBP20.79■□□□□ 0.92
IRF3-221ENST00000598808 LZTFL1Q9NQ48 299 aa20.79■□□□□ 0.92
IRF3-221ENST00000598808 TMEM51Q9NW97 253 aa20.79■□□□□ 0.92
IRF3-221ENST00000598808 TBC1D3BA6NDS4 549 aa20.78■□□□□ 0.92
IRF3-221ENST00000598808 RIOK3O14730 519 aaKnown RBP20.78■□□□□ 0.92
IRF3-221ENST00000598808 TRIM24O15164 1050 aa20.78■□□□□ 0.92
IRF3-221ENST00000598808 RNF8O76064 485 aa20.78■□□□□ 0.92
IRF3-221ENST00000598808 PENKP01210 267 aaPredicted RBP20.78■□□□□ 0.92
IRF3-221ENST00000598808 DRD1P21728 446 aa20.78■□□□□ 0.92
IRF3-221ENST00000598808 CLCN5P51795 746 aa20.78■□□□□ 0.92
IRF3-221ENST00000598808 RPS24P62847 133 aaKnown RBP20.78■□□□□ 0.92
IRF3-221ENST00000598808 PREPLQ4J6C6 727 aaPredicted RBP20.78■□□□□ 0.92
IRF3-221ENST00000598808 TMEM196Q5HYL7 178 aa20.78■□□□□ 0.92
IRF3-221ENST00000598808 CIR1Q86X95 450 aaPredicted RBP20.78■□□□□ 0.92
IRF3-221ENST00000598808 ANLNQ9NQW6 1124 aa20.78■□□□□ 0.92
IRF3-221ENST00000598808 ZDBF2Q9HCK1 2354 aa20.78■□□□□ 0.92
IRF3-221ENST00000598808 KMT2EQ8IZD2 1858 aa20.78■□□□□ 0.92
IRF3-221ENST00000598808 TMEM110-MUSTN1A8MSY1 372 aa20.77■□□□□ 0.92
IRF3-221ENST00000598808 SRGAP2O75044 1071 aa20.77■□□□□ 0.92
IRF3-221ENST00000598808 KAT7O95251 611 aa20.77■□□□□ 0.92
IRF3-221ENST00000598808 TMEM253P0C7T8 217 aa20.77■□□□□ 0.92
IRF3-221ENST00000598808 HOXD9P28356 352 aaPredicted RBP20.77■□□□□ 0.92
IRF3-221ENST00000598808 EIF2DP41214 584 aaKnown RBP20.77■□□□□ 0.92
IRF3-221ENST00000598808 SSR1P43307 286 aaKnown RBP20.77■□□□□ 0.92
IRF3-221ENST00000598808 MAGEA1P43355 309 aa20.77■□□□□ 0.92
IRF3-221ENST00000598808 CDH18Q13634 790 aa20.77■□□□□ 0.92
IRF3-221ENST00000598808 AUHQ13825 339 aaKnown RBP20.77■□□□□ 0.92
IRF3-221ENST00000598808 DGKKQ5KSL6 1271 aa20.77■□□□□ 0.92
IRF3-221ENST00000598808 LRRC31Q6UY01 552 aa20.77■□□□□ 0.92
IRF3-221ENST00000598808 NUDT18Q6ZVK8 323 aa20.77■□□□□ 0.92
IRF3-221ENST00000598808 MFN1Q8IWA4 741 aa20.77■□□□□ 0.92
IRF3-221ENST00000598808 ETFBKMTQ8IXQ9 262 aa20.77■□□□□ 0.92
IRF3-221ENST00000598808 CCDC185Q8N715 623 aa20.77■□□□□ 0.92
IRF3-221ENST00000598808 TMEM105Q8N8V8 129 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms