RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 SRGAP2BP0DMP2 458 aa23.7■■□□□ 1.39
SPTBN4-210ENST00000596900 RBL1P28749 1068 aa23.7■■□□□ 1.39
SPTBN4-210ENST00000596900 DHX9Q08211 1270 aaKnown RBP23.7■■□□□ 1.39
SPTBN4-210ENST00000596900 SPDYCQ5MJ68 293 aa23.7■■□□□ 1.39
SPTBN4-210ENST00000596900 RWDD4Q6NW29 188 aaKnown RBP23.7■■□□□ 1.39
SPTBN4-210ENST00000596900 USP29Q9HBJ7 922 aa23.7■■□□□ 1.39
SPTBN4-210ENST00000596900 PAK5Q9P286 719 aa23.7■■□□□ 1.39
SPTBN4-210ENST00000596900 SMAPO00193 183 aa23.7■■□□□ 1.38
SPTBN4-210ENST00000596900 IGLV3-27P01718 113 aa23.7■■□□□ 1.38
SPTBN4-210ENST00000596900 MX2P20592 715 aa23.7■■□□□ 1.38
SPTBN4-210ENST00000596900 HOXC13P31276 330 aa23.7■■□□□ 1.38
SPTBN4-210ENST00000596900 MLLT6P55198 1093 aaPredicted RBP23.7■■□□□ 1.38
SPTBN4-210ENST00000596900 ERVFC1P60507 584 aa23.7■■□□□ 1.38
SPTBN4-210ENST00000596900 MORF4L2Q15014 288 aa23.7■■□□□ 1.38
SPTBN4-210ENST00000596900 PABPC1LQ4VXU2 614 aaKnown RBP23.7■■□□□ 1.38
SPTBN4-210ENST00000596900 MANEALQ5VSG8 457 aa23.7■■□□□ 1.38
SPTBN4-210ENST00000596900 HIBCHQ6NVY1 386 aaPredicted RBP23.7■■□□□ 1.38
SPTBN4-210ENST00000596900 RHBDF2Q6PJF5 856 aa23.7■■□□□ 1.38
SPTBN4-210ENST00000596900 MRPL43Q8N983 215 aaKnown RBP23.7■■□□□ 1.38
SPTBN4-210ENST00000596900 SPPL3Q8TCT6 385 aa23.7■■□□□ 1.38
SPTBN4-210ENST00000596900 SAMD11Q96NU1 681 aa23.7■■□□□ 1.38
SPTBN4-210ENST00000596900 DONSONQ9NYP3 566 aa23.7■■□□□ 1.38
SPTBN4-210ENST00000596900 MFHAS1Q9Y4C4 1052 aa23.7■■□□□ 1.38
SPTBN4-210ENST00000596900 SNX10Q9Y5X0 201 aa23.7■■□□□ 1.38
SPTBN4-210ENST00000596900 HS3ST4Q9Y661 456 aa23.7■■□□□ 1.38
SPTBN4-210ENST00000596900 GLUD1P00367 558 aa23.69■■□□□ 1.38
SPTBN4-210ENST00000596900 RPL22P35268 128 aaKnown RBP23.69■■□□□ 1.38
SPTBN4-210ENST00000596900 GGCXP38435 758 aa23.69■■□□□ 1.38
SPTBN4-210ENST00000596900 PLPP4Q5VZY2 271 aa23.69■■□□□ 1.38
SPTBN4-210ENST00000596900 LILRA6Q6PI73 481 aa23.69■■□□□ 1.38
SPTBN4-210ENST00000596900 LRRC31Q6UY01 552 aa23.69■■□□□ 1.38
SPTBN4-210ENST00000596900 ELMOD1Q8N336 334 aa23.69■■□□□ 1.38
SPTBN4-210ENST00000596900 RUFY1Q96T51 708 aa23.69■■□□□ 1.38
SPTBN4-210ENST00000596900 C17orf80Q9BSJ5 609 aa23.69■■□□□ 1.38
SPTBN4-210ENST00000596900 BRD8Q9H0E9 1235 aa23.69■■□□□ 1.38
SPTBN4-210ENST00000596900 SHOC2Q9UQ13 582 aa23.69■■□□□ 1.38
SPTBN4-210ENST00000596900 CLUHO75153 1309 aa23.69■■□□□ 1.38
SPTBN4-210ENST00000596900 PPFIA2O75334 1257 aa23.68■■□□□ 1.38
SPTBN4-210ENST00000596900 STK10O94804 968 aaKnown RBP23.68■■□□□ 1.38
SPTBN4-210ENST00000596900 COG7P83436 770 aa23.68■■□□□ 1.38
SPTBN4-210ENST00000596900 CFAP58Q5T655 872 aa23.68■■□□□ 1.38
SPTBN4-210ENST00000596900 ALS2CLQ60I27 953 aa23.68■■□□□ 1.38
SPTBN4-210ENST00000596900 LZTR1Q8N653 840 aa23.68■■□□□ 1.38
SPTBN4-210ENST00000596900 ATP8A1Q9Y2Q0 1164 aa23.68■■□□□ 1.38
SPTBN4-210ENST00000596900 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.68■■□□□ 1.38
SPTBN4-210ENST00000596900 GOLGA6BA6NDN3 693 aa23.68■■□□□ 1.38
SPTBN4-210ENST00000596900 C2orf71A6NGG8 1288 aa23.68■■□□□ 1.38
SPTBN4-210ENST00000596900 E9PAM4 449 aa23.68■■□□□ 1.38
SPTBN4-210ENST00000596900 TP73O15350 636 aa23.68■■□□□ 1.38
SPTBN4-210ENST00000596900 C8AP07357 584 aa23.68■■□□□ 1.38
SPTBN4-210ENST00000596900 PPIL6Q8IXY8 311 aa23.68■■□□□ 1.38
SPTBN4-210ENST00000596900 TSEN2Q8NCE0 465 aaKnown RBP23.68■■□□□ 1.38
SPTBN4-210ENST00000596900 KREMEN2Q8NCW0 462 aa23.68■■□□□ 1.38
SPTBN4-210ENST00000596900 MICAL1Q8TDZ2 1067 aa23.68■■□□□ 1.38
SPTBN4-210ENST00000596900 HTR3CQ8WXA8 447 aa23.68■■□□□ 1.38
SPTBN4-210ENST00000596900 HMBSP08397 361 aa23.67■■□□□ 1.38
SPTBN4-210ENST00000596900 SPATA31D3P0C874 917 aa23.67■■□□□ 1.38
SPTBN4-210ENST00000596900 C9orf50Q5SZB4 431 aa23.67■■□□□ 1.38
SPTBN4-210ENST00000596900 PIK3R6Q5UE93 754 aa23.67■■□□□ 1.38
SPTBN4-210ENST00000596900 SPATA31D4Q6ZUB0 917 aa23.67■■□□□ 1.38
SPTBN4-210ENST00000596900 B4GALNT4Q76KP1 1039 aa23.67■■□□□ 1.38
SPTBN4-210ENST00000596900 HOOK3Q86VS8 718 aa23.67■■□□□ 1.38
SPTBN4-210ENST00000596900 CCNYQ8ND76 341 aa23.67■■□□□ 1.38
SPTBN4-210ENST00000596900 UBLCP1Q8WVY7 318 aaPredicted RBP23.67■■□□□ 1.38
SPTBN4-210ENST00000596900 ADAM7Q9H2U9 754 aa23.67■■□□□ 1.38
SPTBN4-210ENST00000596900 XPO7Q9UIA9 1087 aaKnown RBP23.67■■□□□ 1.38
SPTBN4-210ENST00000596900 COCHO43405 550 aa23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 PMS2P54278 862 aa23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 AP1B1Q10567 949 aa23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 PRKD1Q15139 912 aaPredicted RBP23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 MS4A13Q5J8X5 152 aa23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 RNASEH2BQ5TBB1 312 aaKnown RBP23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 RTL10Q7L3V2 364 aa23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 PLD4Q96BZ4 506 aa23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 PRDM12Q9H4Q4 367 aa23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 NEU3Q9UQ49 428 aa23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 C1RP00736 705 aa23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 HSD17B3P37058 310 aa23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 HARS2P49590 506 aaKnown RBP23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 BASP1P80723 227 aaKnown RBP23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 CCDC25Q86WR0 208 aa23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 ZCCHC9Q8N567 271 aaKnown RBP23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 HDAC11Q96DB2 347 aa23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 TXLNGYQ9BZA5 131 aa23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 KLC2Q9H0B6 622 aa23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 PPARGC1AQ9UBK2 798 aaKnown RBP23.66■■□□□ 1.38
SPTBN4-210ENST00000596900 ANAPC1Q9H1A4 1944 aa23.65■■□□□ 1.38
SPTBN4-210ENST00000596900 GBF1Q92538 1859 aa23.65■■□□□ 1.38
SPTBN4-210ENST00000596900 C5orf60A6NFR6 353 aa23.65■■□□□ 1.38
SPTBN4-210ENST00000596900 HIDE1A8MVS5 230 aa23.65■■□□□ 1.38
SPTBN4-210ENST00000596900 MTSS1O43312 755 aa23.65■■□□□ 1.38
SPTBN4-210ENST00000596900 GCATO75600 419 aa23.65■■□□□ 1.38
SPTBN4-210ENST00000596900 OAS1P00973 400 aaKnown RBP23.65■■□□□ 1.38
SPTBN4-210ENST00000596900 CA3P07451 260 aa23.65■■□□□ 1.38
SPTBN4-210ENST00000596900 MAGEA10P43363 369 aaPredicted RBP23.65■■□□□ 1.38
SPTBN4-210ENST00000596900 HSP90B2PQ58FF3 399 aa23.65■■□□□ 1.38
SPTBN4-210ENST00000596900 NPWQ8N729 165 aa23.65■■□□□ 1.38
SPTBN4-210ENST00000596900 ABHD8Q96I13 439 aa23.65■■□□□ 1.38
SPTBN4-210ENST00000596900 TGS1Q96RS0 853 aaKnown RBP23.65■■□□□ 1.38
SPTBN4-210ENST00000596900 LGMNQ99538 433 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms