RNA–Protein interactions for RNA: ENST00000596824.1

SYMPK-207, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-207ENST00000596824 LNP1A1A4G5 178 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 PATE3B3GLJ2 98 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 AP5Z1O43299 807 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 DAB1O75553 588 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 GRAP2O75791 330 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 MBD3O95983 291 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 KLK7P49862 253 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 COPAP53621 1224 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 SLC6A3Q01959 620 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 RPL6Q02878 288 aaKnown RBP12.09□□□□□ -0.47
SYMPK-207ENST00000596824 ARID5AQ03989 594 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 STX1AQ16623 288 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 CCDC183Q5T5S1 534 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 STPG1Q5TH74 334 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 PEAR1Q5VY43 1037 aaPredicted RBP12.09□□□□□ -0.47
SYMPK-207ENST00000596824 LYSMD4Q5XG99 296 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 RAP1GAP2Q684P5 730 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 MBLAC2Q68D91 279 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 SASS6Q6UVJ0 657 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 SERPINA13PQ6UXR4 307 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 SLC26A9Q7LBE3 791 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 METTL3Q86U44 580 aaKnown RBP12.09□□□□□ -0.47
SYMPK-207ENST00000596824 MFN1Q8IWA4 741 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 ZNF557Q8N988 423 aaPredicted RBP12.09□□□□□ -0.47
SYMPK-207ENST00000596824 ZNF397Q8NF99 534 aaPredicted RBP12.09□□□□□ -0.47
SYMPK-207ENST00000596824 FIBINQ8TAL6 211 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 CYB5D2Q8WUJ1 264 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 DDX1Q92499 740 aaKnown RBP12.09□□□□□ -0.47
SYMPK-207ENST00000596824 PIGKQ92643 395 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 BTN2A3PQ96KV6 586 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 EDEM2Q9BV94 578 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 MKRN2Q9H000 416 aaKnown RBP12.09□□□□□ -0.47
SYMPK-207ENST00000596824 TMEM245Q9H330 911 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 PRDM16Q9HAZ2 1276 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 TMEM74BQ9NUR3 256 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 STIM2Q9P246 746 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 USP36Q9P275 1121 aaKnown RBP12.09□□□□□ -0.47
SYMPK-207ENST00000596824 CEP83Q9Y592 693 aa12.09□□□□□ -0.47
SYMPK-207ENST00000596824 ATXN2Q99700 1313 aaKnown RBP12.09□□□□□ -0.47
SYMPK-207ENST00000596824 TYW5A2RUC4 315 aaKnown RBP12.08□□□□□ -0.48
SYMPK-207ENST00000596824 KCNU1A8MYU2 1149 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 KHNYNO15037 678 aaKnown RBP12.08□□□□□ -0.48
SYMPK-207ENST00000596824 EPHB6O15197 1021 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 SYNCRIPO60506 623 aaKnown RBP12.08□□□□□ -0.48
SYMPK-207ENST00000596824 LUC7L3O95232 432 aaKnown RBP12.08□□□□□ -0.48
SYMPK-207ENST00000596824 EPHX1P07099 455 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 HLA-EP13747 358 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 TACR2P21452 398 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 ITPKAP23677 461 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 GABRB2P47870 512 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 SNX16P57768 344 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 CDK17Q00537 523 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 MYL5Q02045 173 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 LMAN2Q12907 356 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 CAMK2GQ13555 558 aaPredicted RBP12.08□□□□□ -0.48
SYMPK-207ENST00000596824 FNDC3BQ53EP0 1204 aaKnown RBP12.08□□□□□ -0.48
SYMPK-207ENST00000596824 OTUD1Q5VV17 481 aaPredicted RBP12.08□□□□□ -0.48
SYMPK-207ENST00000596824 TAF3Q5VWG9 929 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 NOP9Q86U38 636 aaKnown RBP12.08□□□□□ -0.48
SYMPK-207ENST00000596824 CHSY1Q86X52 802 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 ZDHHC17Q8IUH5 632 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 SYT12Q8IV01 421 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 SLC41A1Q8IVJ1 513 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 LGI2Q8N0V4 545 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 CFAP52Q8N1V2 620 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 CARNMT1Q8N4J0 409 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 DEFB119Q8N690 84 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 ATP6V0D2Q8N8Y2 350 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 TMEM35BQ8NCS4 154 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 EPS8L1Q8TE68 723 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 PRMT1Q99873 361 aaKnown RBP12.08□□□□□ -0.48
SYMPK-207ENST00000596824 STK33Q9BYT3 514 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 SYNCQ9H7C4 482 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.08□□□□□ -0.48
SYMPK-207ENST00000596824 DDIT4Q9NX09 232 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 LIMA1Q9UHB6 759 aaKnown RBP12.08□□□□□ -0.48
SYMPK-207ENST00000596824 EVLQ9UI08 416 aaPredicted RBP12.08□□□□□ -0.48
SYMPK-207ENST00000596824 PILRBQ9UKJ0 227 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 INTS6Q9UL03 887 aaKnown RBP12.08□□□□□ -0.48
SYMPK-207ENST00000596824 SIK3Q9Y2K2 1263 aa12.08□□□□□ -0.48
SYMPK-207ENST00000596824 CNOT1A5YKK6 2376 aaKnown RBP12.07□□□□□ -0.48
SYMPK-207ENST00000596824 SYNJ2BP-COX16A0A087WUM0 186 aa12.07□□□□□ -0.48
SYMPK-207ENST00000596824 TM4SF5O14894 197 aa12.07□□□□□ -0.48
SYMPK-207ENST00000596824 LSM8O95777 96 aaKnown RBP12.07□□□□□ -0.48
SYMPK-207ENST00000596824 IGLV3-19P01714 112 aa12.07□□□□□ -0.48
SYMPK-207ENST00000596824 TPM2P07951 284 aa12.07□□□□□ -0.48
SYMPK-207ENST00000596824 DLDP09622 509 aaKnown RBP12.07□□□□□ -0.48
SYMPK-207ENST00000596824 C7P10643 843 aa12.07□□□□□ -0.48
SYMPK-207ENST00000596824 SLC2A3P11169 496 aa12.07□□□□□ -0.48
SYMPK-207ENST00000596824 POLR2EP19388 210 aaKnown RBP12.07□□□□□ -0.48
SYMPK-207ENST00000596824 CCR1P32246 355 aa12.07□□□□□ -0.48
SYMPK-207ENST00000596824 DPP6P42658 865 aa12.07□□□□□ -0.48
SYMPK-207ENST00000596824 COPB1P53618 953 aaKnown RBP12.07□□□□□ -0.48
SYMPK-207ENST00000596824 JAM2P57087 298 aa12.07□□□□□ -0.48
SYMPK-207ENST00000596824 POLR2FP61218 127 aaKnown RBP12.07□□□□□ -0.48
SYMPK-207ENST00000596824 NOMO3P69849 1222 aa12.07□□□□□ -0.48
SYMPK-207ENST00000596824 ZNF33AQ06730 810 aa12.07□□□□□ -0.48
SYMPK-207ENST00000596824 CDH18Q13634 790 aa12.07□□□□□ -0.48
SYMPK-207ENST00000596824 NCAPHQ15003 741 aa12.07□□□□□ -0.48
SYMPK-207ENST00000596824 FSCBQ5H9T9 825 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms