RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 BBS2Q9BXC9 721 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 IRX2Q9BZI1 471 aaPredicted RBP16.04■□□□□ 0.16
SMCO4-206ENST00000596676 FBRSL1Q9HCM7 1045 aaKnown RBP16.04■□□□□ 0.16
SMCO4-206ENST00000596676 ALG6Q9Y672 507 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 CAPN6Q9Y6Q1 641 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 PRPSAP2O60256 369 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 PALMO75781 387 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 LATS1O95835 1130 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 RARAP10276 462 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 ADH5P11766 374 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 TYRP14679 529 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 PCK1P35558 622 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 CHKAP35790 457 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 ZXDAP98168 799 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 ACAP1Q15027 740 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 ERMARDQ5T6L9 678 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 REXO1L1PQ8IX06 675 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 CPA6Q8N4T0 437 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 KIAA1958Q8N8K9 716 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 WFDC5Q8TCV5 224 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 DDI1Q8WTU0 396 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 NTAN1Q96AB6 310 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 OTUB2Q96DC9 234 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 TMA16Q96EY4 203 aaKnown RBP16.03■□□□□ 0.16
SMCO4-206ENST00000596676 DHX35Q9H5Z1 703 aaKnown RBP16.03■□□□□ 0.16
SMCO4-206ENST00000596676 MPP6Q9NZW5 540 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 OR12D3Q9UGF7 316 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 AP4E1Q9UPM8 1137 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 PIAS3Q9Y6X2 628 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 MIA3Q5JRA6 1907 aa16.03■□□□□ 0.16
SMCO4-206ENST00000596676 E9PAM4 449 aa16.02■□□□□ 0.16
SMCO4-206ENST00000596676 F5H5T6 163 aa16.02■□□□□ 0.16
SMCO4-206ENST00000596676 PENKP01210 267 aaPredicted RBP16.02■□□□□ 0.16
SMCO4-206ENST00000596676 CD48P09326 243 aa16.02■□□□□ 0.16
SMCO4-206ENST00000596676 HOXD9P28356 352 aaPredicted RBP16.02■□□□□ 0.16
SMCO4-206ENST00000596676 MAN1A1P33908 653 aa16.02■□□□□ 0.16
SMCO4-206ENST00000596676 OPRD1P41143 372 aa16.02■□□□□ 0.16
SMCO4-206ENST00000596676 MARCKSL1P49006 195 aa16.02■□□□□ 0.16
SMCO4-206ENST00000596676 SCAPQ12770 1279 aa16.02■□□□□ 0.16
SMCO4-206ENST00000596676 ARL13BQ3SXY8 428 aa16.02■□□□□ 0.16
SMCO4-206ENST00000596676 ALFQ53S48 1182 aa16.02■□□□□ 0.16
SMCO4-206ENST00000596676 TPRG1Q6ZUI0 275 aa16.02■□□□□ 0.16
SMCO4-206ENST00000596676 DAAM2Q86T65 1068 aa16.02■□□□□ 0.16
SMCO4-206ENST00000596676 LRRC57Q8N9N7 239 aa16.02■□□□□ 0.16
SMCO4-206ENST00000596676 OSBPL2Q9H1P3 480 aa16.02■□□□□ 0.16
SMCO4-206ENST00000596676 NEU3Q9UQ49 428 aa16.02■□□□□ 0.16
SMCO4-206ENST00000596676 BDP1A6H8Y1 2624 aa16.02■□□□□ 0.15
SMCO4-206ENST00000596676 TTC28Q96AY4 2481 aa16.02■□□□□ 0.15
SMCO4-206ENST00000596676 SPECC1L-ADORA2AF8WAN1 911 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 PI4K2BG5E9Z4 385 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 HOXC11O43248 304 aaPredicted RBP16.01■□□□□ 0.15
SMCO4-206ENST00000596676 CREB3O43889 395 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 LRIG2O94898 1065 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 FTCDO95954 541 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 ADH1CP00326 375 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 DESP17661 470 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 L1CAMP32004 1257 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 GAD2Q05329 585 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 MMRN1Q13201 1228 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 MPPE1Q53F39 396 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 EFHC2Q5JST6 749 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 MANEALQ5VSG8 457 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 OR52K2Q8NGK3 314 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 KRT35Q92764 455 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 DNASE1L2Q92874 299 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 C1orf74Q96LT6 269 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 RPRD1AQ96P16 312 aaPredicted RBP16.01■□□□□ 0.15
SMCO4-206ENST00000596676 DDX50Q9BQ39 737 aaKnown RBP16.01■□□□□ 0.15
SMCO4-206ENST00000596676 COL25A1Q9BXS0 654 aaPredicted RBP16.01■□□□□ 0.15
SMCO4-206ENST00000596676 TRPV5Q9NQA5 729 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.01■□□□□ 0.15
SMCO4-206ENST00000596676 MARK1Q9P0L2 795 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 FBXL21Q9UKT6 434 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 PACSIN2Q9UNF0 486 aaPredicted RBP16.01■□□□□ 0.15
SMCO4-206ENST00000596676 NCOR1O75376 2440 aa16.01■□□□□ 0.15
SMCO4-206ENST00000596676 DRGXA6NNA5 263 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 KRT86O43790 486 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 SPOPO43791 374 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 PDGFBP01127 241 aaPredicted RBP16■□□□□ 0.15
SMCO4-206ENST00000596676 CISD3P0C7P0 127 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 CTHP32929 405 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 GALK1P51570 392 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 PFKPQ01813 784 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 KDSRQ06136 332 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 NR1H3Q13133 447 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 SEMA3BQ13214 749 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 PON2Q15165 354 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 MLF2Q15773 248 aaPredicted RBP16■□□□□ 0.15
SMCO4-206ENST00000596676 PPP6R3Q5H9R7 873 aaPredicted RBP16■□□□□ 0.15
SMCO4-206ENST00000596676 FSCBQ5H9T9 825 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 C11orf63Q6NUN7 778 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 RWDD4Q6NW29 188 aaKnown RBP16■□□□□ 0.15
SMCO4-206ENST00000596676 ANKS1BQ7Z6G8 1248 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 ETFBKMTQ8IXQ9 262 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 SIX5Q8N196 739 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 CARNMT1Q8N4J0 409 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 NETO2Q8NC67 525 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 RAPGEF5Q92565 580 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 PCDH18Q9HCL0 1135 aa16■□□□□ 0.15
SMCO4-206ENST00000596676 NDFIP2Q9NV92 336 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms