RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 NAA30Q147X3 362 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 OASLQ15646 514 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 ERCC6LQ2NKX8 1250 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 STXBP5Q5T5C0 1151 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 Q6ZNB5 142 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 GRASPQ7Z6J2 395 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 MAB21L3Q8N8X9 362 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 SMG7Q92540 1137 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 UBXN4Q92575 508 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 SLCO2A1Q92959 643 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 TBC1D31Q96DN5 1066 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 RUNDC3BQ96NL0 473 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 LRRC1Q9BTT6 524 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 SIK2Q9H0K1 926 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 PRDM12Q9H4Q4 367 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 TASP1Q9H6P5 420 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 STOML2Q9UJZ1 356 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 DRG1Q9Y295 367 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 MFHAS1Q9Y4C4 1052 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 CPQQ9Y646 472 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 V9GYY5 206 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 NYNRINQ9P2P1 1898 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 KIF26AQ9ULI4 1882 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 DRGXA6NNA5 263 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 WASH4PA8MWX3 477 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 E9PAM4 449 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 ZNF197O14709 1029 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 LINC01565O15544 149 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 RAD51CO43502 376 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 TACR2P21452 398 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 CORO1AP31146 461 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 HARS2P49590 506 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 VCPP55072 806 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 ADAM15Q13444 863 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 AUHQ13825 339 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 DHX34Q14147 1143 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 TEAD2Q15562 447 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 ARHGAP15Q53QZ3 475 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 FAM133BQ5BKY9 247 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 GPR158Q5T848 1215 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 ANKRD54Q6NXT1 300 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 SYCE2Q6PIF2 218 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 CCDC137Q6PK04 289 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 POTEHQ6S545 545 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 NPNTQ6UXI9 565 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 HAUS1Q96CS2 278 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 FAM118BQ9BPY3 351 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 KLC2Q9H0B6 622 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 IGFLR1Q9H665 355 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 ANKZF1Q9H8Y5 726 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 SAE1Q9UBE0 346 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 PPARGC1AQ9UBK2 798 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 ZMYM5Q9UJ78 669 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 DNPEPQ9ULA0 475 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 ARHGAP26Q9UNA1 814 aa15.21■□□□□ 0.03
SHKBP1-211ENST00000595945 GOLGA6L7A0A1B0GV03 622 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 TARSL2A2RTX5 802 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 GFRA2O00451 464 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 FGF10O15520 208 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 TCF3P15923 654 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 CEBPBP17676 345 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 WEE1P30291 646 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 KCNJ1P48048 391 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 NR2C2P49116 596 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 SLC11A2P49281 568 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 GBE1Q04446 702 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 SLC10A2Q12908 348 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 SNX1Q13596 522 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 BYSLQ13895 437 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 RAP1GAP2Q684P5 730 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 C8orf74Q6P047 294 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 FBXL22Q6P050 247 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 C1orf228Q6PIY5 440 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 TMC5Q6UXY8 1006 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 GPR149Q86SP6 731 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 NLRP14Q86W24 1093 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 CMTM8Q8IZV2 173 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 ATL2Q8NHH9 583 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 CCDC26Q8TAB7 109 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 OLFM3Q96PB7 478 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 SMPD4Q9NXE4 827 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 AMACRQ9UHK6 382 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 DMGDHQ9UI17 866 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 AGO1Q9UL18 857 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 RAD54BQ9Y620 910 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 MTCH2Q9Y6C9 303 aa15.2■□□□□ 0.02
SHKBP1-211ENST00000595945 UQCRHLA0A096LP55 91 aa15.19■□□□□ 0.02
SHKBP1-211ENST00000595945 FAM187AA6NFU0 413 aa15.19■□□□□ 0.02
SHKBP1-211ENST00000595945 SPDYE4A6NLX3 237 aa15.19■□□□□ 0.02
SHKBP1-211ENST00000595945 DAPK3O43293 454 aa15.19■□□□□ 0.02
SHKBP1-211ENST00000595945 MFSD11O43934 449 aa15.19■□□□□ 0.02
SHKBP1-211ENST00000595945 CKMP06732 381 aa15.19■□□□□ 0.02
SHKBP1-211ENST00000595945 ITGAVP06756 1048 aa15.19■□□□□ 0.02
SHKBP1-211ENST00000595945 UQCRHP07919 91 aa15.19■□□□□ 0.02
SHKBP1-211ENST00000595945 RHOXF2BP0C7M4 288 aa15.19■□□□□ 0.02
SHKBP1-211ENST00000595945 SRGAP2BP0DMP2 458 aa15.19■□□□□ 0.02
SHKBP1-211ENST00000595945 IRF1P10914 325 aa15.19■□□□□ 0.02
SHKBP1-211ENST00000595945 EPHB2P29323 1055 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms