RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 PRDM16Q9HAZ2 1276 aa16.61■□□□□ 0.25
IRF3-210ENST00000595240 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.61■□□□□ 0.25
IRF3-210ENST00000595240 DDIT4Q9NX09 232 aa16.61■□□□□ 0.25
IRF3-210ENST00000595240 STIM2Q9P246 746 aa16.61■□□□□ 0.25
IRF3-210ENST00000595240 TYW5A2RUC4 315 aaKnown RBP16.6■□□□□ 0.25
IRF3-210ENST00000595240 DCDC2BA2VCK2 349 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 AP5Z1O43299 807 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 DAB1O75553 588 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 GRAP2O75791 330 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 LSM8O95777 96 aaKnown RBP16.6■□□□□ 0.25
IRF3-210ENST00000595240 TPM2P07951 284 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 DLDP09622 509 aaKnown RBP16.6■□□□□ 0.25
IRF3-210ENST00000595240 SLC2A3P11169 496 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 KLK7P49862 253 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 RPL6Q02878 288 aaKnown RBP16.6■□□□□ 0.25
IRF3-210ENST00000595240 FKBP15Q5T1M5 1219 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 LYSMD4Q5XG99 296 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 MBLAC2Q68D91 279 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 ARMCX6Q7L4S7 300 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 NOP9Q86U38 636 aaKnown RBP16.6■□□□□ 0.25
IRF3-210ENST00000595240 CFAP52Q8N1V2 620 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 EPS8L1Q8TE68 723 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 PIGKQ92643 395 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 PDCL3Q9H2J4 239 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 CD93Q9NPY3 652 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 USP36Q9P275 1121 aaKnown RBP16.6■□□□□ 0.25
IRF3-210ENST00000595240 LIMA1Q9UHB6 759 aaKnown RBP16.6■□□□□ 0.25
IRF3-210ENST00000595240 CYP8B1Q9UNU6 501 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 PLA2G4CQ9UP65 541 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 SIK3Q9Y2K2 1263 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 PLXND1Q9Y4D7 1925 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 RALGAPA1Q6GYQ0 2036 aa16.6■□□□□ 0.25
IRF3-210ENST00000595240 MED19A0JLT2 244 aaPredicted RBP16.59■□□□□ 0.25
IRF3-210ENST00000595240 LNP1A1A4G5 178 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 KHNYNO15037 678 aaKnown RBP16.59■□□□□ 0.25
IRF3-210ENST00000595240 EPHB6O15197 1021 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 ATP5BP06576 529 aaKnown RBP16.59■□□□□ 0.25
IRF3-210ENST00000595240 EPHX1P07099 455 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 C7P10643 843 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 ZNF18P17022 549 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 TACR2P21452 398 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 CCR1P32246 355 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 HOXD12P35452 270 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 DPP6P42658 865 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 GABRB2P47870 512 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 COPB1P53618 953 aaKnown RBP16.59■□□□□ 0.25
IRF3-210ENST00000595240 COPAP53621 1224 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 LMAN2Q12907 356 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 CAMK2GQ13555 558 aaPredicted RBP16.59■□□□□ 0.25
IRF3-210ENST00000595240 NCAPHQ15003 741 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 FNDC3BQ53EP0 1204 aaKnown RBP16.59■□□□□ 0.25
IRF3-210ENST00000595240 STPG1Q5TH74 334 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 TAF3Q5VWG9 929 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 PEAR1Q5VY43 1037 aaPredicted RBP16.59■□□□□ 0.25
IRF3-210ENST00000595240 RAP1GAP2Q684P5 730 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 CHSY1Q86X52 802 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 TMPRSS6Q8IU80 811 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 SYT12Q8IV01 421 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 LGI2Q8N0V4 545 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 ATP6V0D2Q8N8Y2 350 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 TTC17Q96AE7 1141 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 PRMT1Q99873 361 aaKnown RBP16.59■□□□□ 0.25
IRF3-210ENST00000595240 HSD3B7Q9H2F3 369 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 ITM2CQ9NQX7 267 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 FAM207AQ9NSI2 230 aaPredicted RBP16.59■□□□□ 0.25
IRF3-210ENST00000595240 TMEM74BQ9NUR3 256 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 SLC12A6Q9UHW9 1150 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 EVLQ9UI08 416 aaPredicted RBP16.59■□□□□ 0.25
IRF3-210ENST00000595240 PILRBQ9UKJ0 227 aa16.59■□□□□ 0.25
IRF3-210ENST00000595240 LRRC10BA6NIK2 292 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 LGALS16A8MUM7 142 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 PATE3B3GLJ2 98 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 TM4SF5O14894 197 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 LUC7L3O95232 432 aaKnown RBP16.58■□□□□ 0.24
IRF3-210ENST00000595240 IGLV3-19P01714 112 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 HLA-EP13747 358 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 POLR2EP19388 210 aaKnown RBP16.58■□□□□ 0.24
IRF3-210ENST00000595240 ABCB4P21439 1286 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 ITPKAP23677 461 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 NOS2P35228 1153 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 SCNN1AP37088 669 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 MATKP42679 507 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 JAM2P57087 298 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 POLR2FP61218 127 aaKnown RBP16.58■□□□□ 0.24
IRF3-210ENST00000595240 TYRO3Q06418 890 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 CDH18Q13634 790 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 FSCBQ5H9T9 825 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 OTUD1Q5VV17 481 aaPredicted RBP16.58■□□□□ 0.24
IRF3-210ENST00000595240 CARNMT1Q8N4J0 409 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 DEFB119Q8N690 84 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 OR2T3Q8NH03 318 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 C18orf8Q96DM3 657 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 SIPA1Q96FS4 1042 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 EDEM2Q9BV94 578 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 RRN3Q9NYV6 651 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 TMEM63CQ9P1W3 806 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 NOCTQ9UK39 431 aaKnown RBP16.58■□□□□ 0.24
IRF3-210ENST00000595240 INTS6Q9UL03 887 aaKnown RBP16.58■□□□□ 0.24
IRF3-210ENST00000595240 DAAM1Q9Y4D1 1078 aa16.58■□□□□ 0.24
IRF3-210ENST00000595240 THADAQ6YHU6 1953 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms