RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 PABPC1P11940 636 aaKnown RBP19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 NDUFV2P19404 249 aa19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 TACR2P21452 398 aa19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 CCR1P32246 355 aa19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 GBP1P32455 592 aa19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 CD70P32970 193 aa19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 RNASE9P60153 205 aaKnown RBP19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 RAP1GAP2Q684P5 730 aa19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 PMS2CLQ68D20 193 aa19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 CHST9Q7L1S5 443 aa19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 LGI2Q8N0V4 545 aa19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 PGBD3Q8N328 593 aa19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 ATP6V0D2Q8N8Y2 350 aa19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 WFIKKN2Q8TEU8 576 aa19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 PCDHB18PQ96TA0 734 aa19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 ARRDC1-AS1Q9H2J1 176 aa19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 COX16Q9P0S2 106 aa19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 MBD1Q9UIS9 605 aaPredicted RBP19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 USP18Q9UMW8 372 aa19.15■□□□□ 0.66
SHKBP1-202ENST00000593764 M0QYT0 321 aa19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 RHOBTB1O94844 696 aa19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 SLC2A3P11169 496 aa19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 NME3Q13232 169 aa19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 ELF2Q15723 593 aa19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 CSRP2Q16527 193 aa19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 PTPRNQ16849 979 aa19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 FUT11Q495W5 492 aa19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 FSCBQ5H9T9 825 aa19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 TRNP1Q6NT89 227 aa19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 C11orf74Q86VG3 221 aa19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 MFN1Q8IWA4 741 aa19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 CYB5D2Q8WUJ1 264 aa19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 MRGPRX1Q96LB2 322 aa19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 SLC6A17Q9H1V8 727 aa19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 RRN3Q9NYV6 651 aa19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 SLC12A6Q9UHW9 1150 aa19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 TMEM59LQ9UK28 342 aa19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 INTS6Q9UL03 887 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-202ENST00000593764 THADAQ6YHU6 1953 aa19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 UNGP13051 313 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 ABCB4P21439 1286 aa19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 MMP8P22894 467 aa19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 PRKCHP24723 683 aa19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 FLT3P36888 993 aa19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 LMAN2Q12907 356 aa19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 CCDC6Q16204 474 aa19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 PLA2G2CQ5R387 149 aa19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 FAM102AQ5T9C2 384 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 MBLAC2Q68D91 279 aa19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 CHSY1Q86X52 802 aa19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 AHI1Q8N157 1196 aa19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 ZNF557Q8N988 423 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 SLC30A5Q8TAD4 765 aa19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 RNF34Q969K3 372 aa19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 RMDN1Q96DB5 314 aa19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 PGAP3Q96FM1 320 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 NAP1L5Q96NT1 182 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 MKRN2Q9H000 416 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 TMEM245Q9H330 911 aa19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 PIGVQ9NUD9 493 aa19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 PCDHGA5Q9Y5G8 931 aa19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-202ENST00000593764 PLXND1Q9Y4D7 1925 aa19.12■□□□□ 0.65
SHKBP1-202ENST00000593764 I6L893 689 aaPredicted RBP19.12■□□□□ 0.65
SHKBP1-202ENST00000593764 CXCR3P49682 368 aa19.12■□□□□ 0.65
SHKBP1-202ENST00000593764 ARID5AQ03989 594 aa19.12■□□□□ 0.65
SHKBP1-202ENST00000593764 PTP4A2Q12974 167 aa19.12■□□□□ 0.65
SHKBP1-202ENST00000593764 E2F5Q15329 346 aa19.12■□□□□ 0.65
SHKBP1-202ENST00000593764 SLC25A52Q3SY17 297 aa19.12■□□□□ 0.65
SHKBP1-202ENST00000593764 MMS22LQ6ZRQ5 1243 aa19.12■□□□□ 0.65
SHKBP1-202ENST00000593764 ARCQ7LC44 396 aa19.12■□□□□ 0.65
SHKBP1-202ENST00000593764 BNIPLQ7Z465 357 aa19.12■□□□□ 0.65
SHKBP1-202ENST00000593764 CARNMT1Q8N4J0 409 aa19.12■□□□□ 0.65
SHKBP1-202ENST00000593764 TTC17Q96AE7 1141 aa19.12■□□□□ 0.65
SHKBP1-202ENST00000593764 SPACA7Q96KW9 195 aa19.12■□□□□ 0.65
SHKBP1-202ENST00000593764 TBCBQ99426 244 aa19.12■□□□□ 0.65
SHKBP1-202ENST00000593764 CBX8Q9HC52 389 aa19.12■□□□□ 0.65
SHKBP1-202ENST00000593764 CD93Q9NPY3 652 aa19.12■□□□□ 0.65
SHKBP1-202ENST00000593764 ANLNQ9NQW6 1124 aa19.12■□□□□ 0.65
SHKBP1-202ENST00000593764 PLA2G4CQ9UP65 541 aa19.12■□□□□ 0.65
SHKBP1-202ENST00000593764 CKAP5Q14008 2032 aa19.12■□□□□ 0.65
SHKBP1-202ENST00000593764 A0A1B0GTH6 734 aa19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 BCLAF3A2AJT9 711 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 TYW5A2RUC4 315 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 F5H5T6 163 aa19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 GOLGA8SH3BPF8 625 aa19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 ZBTB24O43167 697 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 LUC7L3O95232 432 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 ADCY5O95622 1261 aa19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 DLDP09622 509 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 ZNF806P0C7X5 589 aa19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 HLA-EP13747 358 aa19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 ID4P47928 161 aa19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 LMNB2Q03252 620 aa19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 AUHQ13825 339 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 BYSLQ13895 437 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 STARD3Q14849 445 aa19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 FBXL22Q6P050 247 aa19.11■□□□□ 0.65
SHKBP1-202ENST00000593764 SERPINA13PQ6UXR4 307 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms