RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 TMA16Q96EY4 203 aaKnown RBP15.35■□□□□ 0.05
PNKP-202ENST00000593706 CDC6Q99741 560 aa15.35■□□□□ 0.05
PNKP-202ENST00000593706 BTBD1Q9H0C5 482 aa15.35■□□□□ 0.05
PNKP-202ENST00000593706 FBRSQ9HAH7 460 aa15.35■□□□□ 0.05
PNKP-202ENST00000593706 ABCC13Q9NSE7 274 aa15.35■□□□□ 0.05
PNKP-202ENST00000593706 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.35■□□□□ 0.05
PNKP-202ENST00000593706 KNTC1P50748 2209 aa15.34■□□□□ 0.05
PNKP-202ENST00000593706 YJEFN3A6XGL0 299 aa15.34■□□□□ 0.05
PNKP-202ENST00000593706 E7ENQ6 273 aa15.34■□□□□ 0.05
PNKP-202ENST00000593706 ATP5BP06576 529 aaKnown RBP15.34■□□□□ 0.05
PNKP-202ENST00000593706 SETSIPP0DME0 302 aa15.34■□□□□ 0.05
PNKP-202ENST00000593706 PABPC1P11940 636 aaKnown RBP15.34■□□□□ 0.05
PNKP-202ENST00000593706 LCP1P13796 627 aa15.34■□□□□ 0.05
PNKP-202ENST00000593706 PPP1R2P41236 205 aa15.34■□□□□ 0.05
PNKP-202ENST00000593706 SUZ12Q15022 739 aaKnown RBP15.34■□□□□ 0.05
PNKP-202ENST00000593706 ACAP1Q15027 740 aa15.34■□□□□ 0.05
PNKP-202ENST00000593706 C19orf48Q6RUI8 117 aa15.34■□□□□ 0.05
PNKP-202ENST00000593706 CLEC17AQ6ZS10 378 aa15.34■□□□□ 0.05
PNKP-202ENST00000593706 ADAT2Q7Z6V5 191 aaKnown RBP15.34■□□□□ 0.05
PNKP-202ENST00000593706 UBA3Q8TBC4 463 aa15.34■□□□□ 0.05
PNKP-202ENST00000593706 BAHD1Q8TBE0 780 aaPredicted RBP15.34■□□□□ 0.05
PNKP-202ENST00000593706 MDM1Q8TC05 714 aa15.34■□□□□ 0.05
PNKP-202ENST00000593706 CEP63Q96MT8 703 aa15.34■□□□□ 0.05
PNKP-202ENST00000593706 TMEM245Q9H330 911 aa15.34■□□□□ 0.05
PNKP-202ENST00000593706 ARMCX3Q9UH62 379 aaPredicted RBP15.34■□□□□ 0.05
PNKP-202ENST00000593706 PCDHGB2Q9Y5G2 931 aa15.34■□□□□ 0.05
PNKP-202ENST00000593706 SLCO1B1Q9Y6L6 691 aa15.34■□□□□ 0.05
PNKP-202ENST00000593706 BIN1O00499 593 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 FSBPO95073 299 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 CAPNS1P04632 268 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 DLDP09622 509 aaKnown RBP15.33■□□□□ 0.04
PNKP-202ENST00000593706 GRIA4P48058 902 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 SGSHP51688 502 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 ZBTB16Q05516 673 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 LRMPQ12912 555 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 STIM1Q13586 685 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 KIF19Q2TAC6 998 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 CCDC157Q569K6 752 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 MBLAC2Q68D91 279 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 LAYNQ6UX15 382 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.33■□□□□ 0.04
PNKP-202ENST00000593706 C1orf216Q8TAB5 229 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 GANCQ8TET4 914 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 GOLGA1Q92805 767 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 TM9SF3Q9HD45 589 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 CNGB3Q9NQW8 809 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 KIAA1522Q9P206 1035 aaPredicted RBP15.33■□□□□ 0.04
PNKP-202ENST00000593706 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.33■□□□□ 0.04
PNKP-202ENST00000593706 BTBD3Q9Y2F9 522 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 GPSM3Q9Y4H4 160 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 SNX11Q9Y5W9 270 aa15.33■□□□□ 0.04
PNKP-202ENST00000593706 TYW5A2RUC4 315 aaKnown RBP15.32■□□□□ 0.04
PNKP-202ENST00000593706 O00370 1275 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 PIK3R2O00459 728 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 PMM2O15305 246 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 TBL1XO60907 577 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 ATXN1LP0C7T5 689 aaKnown RBP15.32■□□□□ 0.04
PNKP-202ENST00000593706 VDRP11473 427 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 POLR2EP19388 210 aaKnown RBP15.32■□□□□ 0.04
PNKP-202ENST00000593706 TBXAS1P24557 533 aaPredicted RBP15.32■□□□□ 0.04
PNKP-202ENST00000593706 SLC11A2P49281 568 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 RGS7P49802 495 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 CCT8P50990 548 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 DAOAP59103 153 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 RPS14P62263 151 aaKnown RBP15.32■□□□□ 0.04
PNKP-202ENST00000593706 PTPRNQ16849 979 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 INAVAQ3KP66 663 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 NUGGCQ68CJ6 796 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 ZNF776Q68DI1 518 aaPredicted RBP15.32■□□□□ 0.04
PNKP-202ENST00000593706 RFWD3Q6PCD5 774 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 ADIPOR2Q86V24 386 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 MFN1Q8IWA4 741 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 UBR7Q8N806 425 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 ZNF557Q8N988 423 aaPredicted RBP15.32■□□□□ 0.04
PNKP-202ENST00000593706 NELFBQ8WX92 580 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 BIRC7Q96CA5 298 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 MED15Q96RN5 788 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 PRSS16Q9NQE7 514 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 KIAA1468Q9P260 1216 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 STOML2Q9UJZ1 356 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 CTNND2Q9UQB3 1225 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 ANKRD6Q9Y2G4 727 aa15.32■□□□□ 0.04
PNKP-202ENST00000593706 TDRD6O60522 2096 aaKnown RBP15.31■□□□□ 0.04
PNKP-202ENST00000593706 M0QYV0 167 aa15.31■□□□□ 0.04
PNKP-202ENST00000593706 CD27P26842 260 aa15.31■□□□□ 0.04
PNKP-202ENST00000593706 CD70P32970 193 aa15.31■□□□□ 0.04
PNKP-202ENST00000593706 ANP32AP39687 249 aaKnown RBP15.31■□□□□ 0.04
PNKP-202ENST00000593706 GRK6P43250 576 aa15.31■□□□□ 0.04
PNKP-202ENST00000593706 MARSP56192 900 aaKnown RBP15.31■□□□□ 0.04
PNKP-202ENST00000593706 ST8SIA6P61647 398 aa15.31■□□□□ 0.04
PNKP-202ENST00000593706 COL28A1Q2UY09 1125 aa15.31■□□□□ 0.04
PNKP-202ENST00000593706 KLHL10Q6JEL2 608 aa15.31■□□□□ 0.04
PNKP-202ENST00000593706 MSANTD2Q6P1R3 559 aa15.31■□□□□ 0.04
PNKP-202ENST00000593706 TMPRSS7Q7RTY8 843 aa15.31■□□□□ 0.04
PNKP-202ENST00000593706 UNC45BQ8IWX7 931 aa15.31■□□□□ 0.04
PNKP-202ENST00000593706 GALNT15Q8N3T1 639 aa15.31■□□□□ 0.04
PNKP-202ENST00000593706 WFDC5Q8TCV5 224 aa15.31■□□□□ 0.04
PNKP-202ENST00000593706 KCTD13Q8WZ19 329 aa15.31■□□□□ 0.04
PNKP-202ENST00000593706 IGSF8Q969P0 613 aa15.31■□□□□ 0.04
PNKP-202ENST00000593706 SGK2Q9HBY8 427 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms