RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 FBXO21O94952 628 aa24.87■■□□□ 1.57
LSM4-202ENST00000593564 BRD2P25440 801 aaKnown RBP24.87■■□□□ 1.57
LSM4-202ENST00000593564 ACSL1P33121 698 aa24.87■■□□□ 1.57
LSM4-202ENST00000593564 PPP1R2P41236 205 aa24.87■■□□□ 1.57
LSM4-202ENST00000593564 CETN1Q12798 172 aa24.87■■□□□ 1.57
LSM4-202ENST00000593564 HLA-BQ31612 363 aa24.87■■□□□ 1.57
LSM4-202ENST00000593564 CCDC40Q4G0X9 1142 aa24.87■■□□□ 1.57
LSM4-202ENST00000593564 LMO3Q8TAP4 145 aa24.87■■□□□ 1.57
LSM4-202ENST00000593564 CLEC4CQ8WTT0 213 aa24.87■■□□□ 1.57
LSM4-202ENST00000593564 GOLGA1Q92805 767 aa24.87■■□□□ 1.57
LSM4-202ENST00000593564 KAT5Q92993 513 aa24.87■■□□□ 1.57
LSM4-202ENST00000593564 PRSS16Q9NQE7 514 aa24.87■■□□□ 1.57
LSM4-202ENST00000593564 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.87■■□□□ 1.57
LSM4-202ENST00000593564 FREM2Q5SZK8 3169 aa24.87■■□□□ 1.57
LSM4-202ENST00000593564 GOLGA6L7A0A1B0GV03 622 aa24.86■■□□□ 1.57
LSM4-202ENST00000593564 CD44P16070 742 aaKnown RBP24.86■■□□□ 1.57
LSM4-202ENST00000593564 POLR2EP19388 210 aaKnown RBP24.86■■□□□ 1.57
LSM4-202ENST00000593564 SLC6A4P31645 630 aa24.86■■□□□ 1.57
LSM4-202ENST00000593564 CD70P32970 193 aa24.86■■□□□ 1.57
LSM4-202ENST00000593564 AFF3P51826 1226 aaKnown RBP24.86■■□□□ 1.57
LSM4-202ENST00000593564 TBX4P57082 545 aa24.86■■□□□ 1.57
LSM4-202ENST00000593564 RPS14P62263 151 aaKnown RBP24.86■■□□□ 1.57
LSM4-202ENST00000593564 SNX19Q92543 992 aa24.86■■□□□ 1.57
LSM4-202ENST00000593564 BTBD1Q9H0C5 482 aa24.86■■□□□ 1.57
LSM4-202ENST00000593564 TM7SF3Q9NS93 570 aa24.86■■□□□ 1.57
LSM4-202ENST00000593564 FNDC3AQ9Y2H6 1198 aaKnown RBP24.86■■□□□ 1.57
LSM4-202ENST00000593564 NUMA1Q14980 2115 aa24.86■■□□□ 1.57
LSM4-202ENST00000593564 KNL1Q8NG31 2342 aa24.85■■□□□ 1.57
LSM4-202ENST00000593564 A0A1B0GVT2 93 aa24.85■■□□□ 1.57
LSM4-202ENST00000593564 SEMA4FO95754 770 aa24.85■■□□□ 1.57
LSM4-202ENST00000593564 DNTTP04053 509 aa24.85■■□□□ 1.57
LSM4-202ENST00000593564 GCNT1Q02742 428 aa24.85■■□□□ 1.57
LSM4-202ENST00000593564 TTI2Q6NXR4 508 aa24.85■■□□□ 1.57
LSM4-202ENST00000593564 FOXR2Q6PJQ5 311 aa24.85■■□□□ 1.57
LSM4-202ENST00000593564 ELOA2Q8IYF1 753 aaPredicted RBP24.85■■□□□ 1.57
LSM4-202ENST00000593564 HJURPQ8NCD3 748 aaPredicted RBP24.85■■□□□ 1.57
LSM4-202ENST00000593564 LMLNQ96KR4 655 aa24.85■■□□□ 1.57
LSM4-202ENST00000593564 OSGEPQ9NPF4 335 aa24.85■■□□□ 1.57
LSM4-202ENST00000593564 SUN2Q9UH99 717 aa24.85■■□□□ 1.57
LSM4-202ENST00000593564 MAN1B1Q9UKM7 699 aa24.85■■□□□ 1.57
LSM4-202ENST00000593564 APOBEC2Q9Y235 224 aaKnown RBP24.85■■□□□ 1.57
LSM4-202ENST00000593564 PCDHGB2Q9Y5G2 931 aa24.85■■□□□ 1.57
LSM4-202ENST00000593564 SLCO1B1Q9Y6L6 691 aa24.85■■□□□ 1.57
LSM4-202ENST00000593564 FYNP06241 537 aa24.84■■□□□ 1.57
LSM4-202ENST00000593564 CSNK1EP49674 416 aaKnown RBP24.84■■□□□ 1.57
LSM4-202ENST00000593564 NNTQ13423 1086 aa24.84■■□□□ 1.57
LSM4-202ENST00000593564 TTC31Q49AM3 519 aaPredicted RBP24.84■■□□□ 1.57
LSM4-202ENST00000593564 NADSYN1Q6IA69 706 aa24.84■■□□□ 1.57
LSM4-202ENST00000593564 DBX2Q6ZNG2 339 aa24.84■■□□□ 1.57
LSM4-202ENST00000593564 MFN1Q8IWA4 741 aa24.84■■□□□ 1.57
LSM4-202ENST00000593564 FIBINQ8TAL6 211 aa24.84■■□□□ 1.57
LSM4-202ENST00000593564 SETD7Q8WTS6 366 aaKnown RBP24.84■■□□□ 1.57
LSM4-202ENST00000593564 TTC17Q96AE7 1141 aa24.84■■□□□ 1.57
LSM4-202ENST00000593564 FCRL2Q96LA5 508 aaPredicted RBP24.84■■□□□ 1.57
LSM4-202ENST00000593564 PRICKLE1Q96MT3 831 aaPredicted RBP24.84■■□□□ 1.57
LSM4-202ENST00000593564 DDX50Q9BQ39 737 aaKnown RBP24.84■■□□□ 1.57
LSM4-202ENST00000593564 ANKRD11Q6UB99 2663 aaPredicted RBP24.83■■□□□ 1.57
LSM4-202ENST00000593564 CALCAP01258 141 aa24.83■■□□□ 1.57
LSM4-202ENST00000593564 CAPNS1P04632 268 aa24.83■■□□□ 1.57
LSM4-202ENST00000593564 RPL34P49207 117 aaKnown RBP24.83■■□□□ 1.57
LSM4-202ENST00000593564 TEAD4Q15561 434 aa24.83■■□□□ 1.57
LSM4-202ENST00000593564 ZNF776Q68DI1 518 aaPredicted RBP24.83■■□□□ 1.57
LSM4-202ENST00000593564 ISM2Q6H9L7 571 aa24.83■■□□□ 1.57
LSM4-202ENST00000593564 RRAGAQ7L523 313 aa24.83■■□□□ 1.57
LSM4-202ENST00000593564 ARHGEF19Q8IW93 802 aa24.83■■□□□ 1.57
LSM4-202ENST00000593564 PNPLA1Q8N8W4 532 aa24.83■■□□□ 1.57
LSM4-202ENST00000593564 BAHD1Q8TBE0 780 aaPredicted RBP24.83■■□□□ 1.57
LSM4-202ENST00000593564 DQX1Q8TE96 717 aaKnown RBP24.83■■□□□ 1.57
LSM4-202ENST00000593564 MYO19Q96H55 970 aa24.83■■□□□ 1.57
LSM4-202ENST00000593564 SERPINB11Q96P15 392 aa24.83■■□□□ 1.57
LSM4-202ENST00000593564 MIS12Q9H081 205 aa24.83■■□□□ 1.57
LSM4-202ENST00000593564 SGK2Q9HBY8 427 aa24.83■■□□□ 1.57
LSM4-202ENST00000593564 TM9SF3Q9HD45 589 aa24.83■■□□□ 1.57
LSM4-202ENST00000593564 STIM2Q9P246 746 aa24.83■■□□□ 1.57
LSM4-202ENST00000593564 TLR6Q9Y2C9 796 aa24.83■■□□□ 1.57
LSM4-202ENST00000593564 CACNA1GO43497 2377 aa24.83■■□□□ 1.57
LSM4-202ENST00000593564 DSPP15924 2871 aaKnown RBP24.83■■□□□ 1.56
LSM4-202ENST00000593564 TYW5A2RUC4 315 aaKnown RBP24.82■■□□□ 1.56
LSM4-202ENST00000593564 FLRT2O43155 660 aa24.82■■□□□ 1.56
LSM4-202ENST00000593564 SART1O43290 800 aaKnown RBP24.82■■□□□ 1.56
LSM4-202ENST00000593564 GRIA4P48058 902 aa24.82■■□□□ 1.56
LSM4-202ENST00000593564 KIF19Q2TAC6 998 aa24.82■■□□□ 1.56
LSM4-202ENST00000593564 KLHL10Q6JEL2 608 aa24.82■■□□□ 1.56
LSM4-202ENST00000593564 SLCO6A1Q86UG4 719 aa24.82■■□□□ 1.56
LSM4-202ENST00000593564 BIRC7Q96CA5 298 aa24.82■■□□□ 1.56
LSM4-202ENST00000593564 SLC39A13Q96H72 371 aa24.82■■□□□ 1.56
LSM4-202ENST00000593564 RSPH9Q9H1X1 276 aaPredicted RBP24.82■■□□□ 1.56
LSM4-202ENST00000593564 KIAA1522Q9P206 1035 aaPredicted RBP24.82■■□□□ 1.56
LSM4-202ENST00000593564 ASLP04424 464 aa24.81■■□□□ 1.56
LSM4-202ENST00000593564 CD27P26842 260 aa24.81■■□□□ 1.56
LSM4-202ENST00000593564 CSKP41240 450 aa24.81■■□□□ 1.56
LSM4-202ENST00000593564 GPD2P43304 727 aa24.81■■□□□ 1.56
LSM4-202ENST00000593564 ST8SIA6P61647 398 aa24.81■■□□□ 1.56
LSM4-202ENST00000593564 RPS24P62847 133 aaKnown RBP24.81■■□□□ 1.56
LSM4-202ENST00000593564 NUCB2P80303 420 aa24.81■■□□□ 1.56
LSM4-202ENST00000593564 BEND5Q7L4P6 421 aa24.81■■□□□ 1.56
LSM4-202ENST00000593564 KDM1BQ8NB78 822 aa24.81■■□□□ 1.56
LSM4-202ENST00000593564 EHBP1Q8NDI1 1231 aa24.81■■□□□ 1.56
LSM4-202ENST00000593564 NELFBQ8WX92 580 aa24.81■■□□□ 1.56
LSM4-202ENST00000593564 MYEOVQ96EZ4 313 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms