RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 ST3GAL5Q9UNP4 418 aa17.05■□□□□ 0.32
PRKCSH-217ENST00000592741 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.05■□□□□ 0.32
PRKCSH-217ENST00000592741 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.05■□□□□ 0.32
PRKCSH-217ENST00000592741 PTCH2Q9Y6C5 1203 aa17.05■□□□□ 0.32
PRKCSH-217ENST00000592741 FYNP06241 537 aa17.04■□□□□ 0.32
PRKCSH-217ENST00000592741 DLDP09622 509 aaKnown RBP17.04■□□□□ 0.32
PRKCSH-217ENST00000592741 C6orf222P0C671 652 aaPredicted RBP17.04■□□□□ 0.32
PRKCSH-217ENST00000592741 PTPN4P29074 926 aa17.04■□□□□ 0.32
PRKCSH-217ENST00000592741 CLCNKBP51801 687 aa17.04■□□□□ 0.32
PRKCSH-217ENST00000592741 CRADDP78560 199 aa17.04■□□□□ 0.32
PRKCSH-217ENST00000592741 CTC1Q2NKJ3 1217 aa17.04■□□□□ 0.32
PRKCSH-217ENST00000592741 BSPRYQ5W0U4 402 aa17.04■□□□□ 0.32
PRKCSH-217ENST00000592741 RNF169Q8NCN4 708 aa17.04■□□□□ 0.32
PRKCSH-217ENST00000592741 GSTCDQ8NEC7 633 aa17.04■□□□□ 0.32
PRKCSH-217ENST00000592741 SKA1Q96BD8 255 aa17.04■□□□□ 0.32
PRKCSH-217ENST00000592741 PCED1BQ96HM7 432 aa17.04■□□□□ 0.32
PRKCSH-217ENST00000592741 MTG1Q9BT17 334 aaPredicted RBP17.04■□□□□ 0.32
PRKCSH-217ENST00000592741 MECRQ9BV79 373 aa17.04■□□□□ 0.32
PRKCSH-217ENST00000592741 CHST12Q9NRB3 414 aa17.04■□□□□ 0.32
PRKCSH-217ENST00000592741 SIRPGQ9P1W8 387 aa17.04■□□□□ 0.32
PRKCSH-217ENST00000592741 KLHL8Q9P2G9 620 aaPredicted RBP17.04■□□□□ 0.32
PRKCSH-217ENST00000592741 MYBPHLA2RUH7 354 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 MANSC4A6NHS7 340 aaPredicted RBP17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 YJEFN3A6XGL0 299 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 E7ENQ6 273 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 BIRC5O15392 142 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 ERCC2P18074 760 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 RABGGTBP53611 331 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 HUNKP57058 714 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 CRYMQ14894 314 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 CHI3L2Q15782 390 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 ARL13BQ3SXY8 428 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 RAB41Q5JT25 222 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 LONP2Q86WA8 852 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 STKLD1Q8NE28 680 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 ADAM32Q8TC27 787 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 ACMSDQ8TDX5 336 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 TBC1D10AQ9BXI6 508 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 WDR6Q9NNW5 1121 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 RRN3Q9NYV6 651 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 FBXW11Q9UKB1 542 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 TIMM13Q9Y5L4 95 aaPredicted RBP17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 MYADML2A6NDP7 307 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 DUSP11O75319 330 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 LTFP02788 710 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 MYL2P10916 166 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 NCAM1P13591 858 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 SERPINB3P29508 390 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 BST1Q10588 318 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 C17orf99Q6UX52 265 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 PACS1Q6VY07 963 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 GPRIN1Q7Z2K8 1008 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 PID1Q7Z2X4 250 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 ARNTL2Q8WYA1 636 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 LPPQ93052 612 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 PGAP3Q96FM1 320 aaPredicted RBP17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 SMARCD1Q96GM5 515 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 PIH1D1Q9NWS0 290 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 SYBUQ9NX95 663 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 GIT1Q9Y2X7 761 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 NUMBLQ9Y6R0 609 aa17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 ZNF638Q14966 1978 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-217ENST00000592741 CCDC195A0A1B0GUA6 201 aa17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 FAM72CH0Y354 149 aa17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 NCAM2O15394 837 aa17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 BPGMP07738 259 aa17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 USP17L7P0C7H9 530 aa17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 PCSK1P29120 753 aa17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 HCAR3P49019 387 aa17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 SEMA3BQ13214 749 aa17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 DBN1Q16643 649 aa17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 FAM72AQ5TYM5 149 aa17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 FAM72DQ6L9T8 149 aa17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 KYAT3Q6YP21 454 aaKnown RBP17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 FAM72BQ86X60 149 aa17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 UNC5BQ8IZJ1 945 aa17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 ZMIZ2Q8NF64 920 aa17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 KCNK16Q96T55 309 aa17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 XPNPEP3Q9NQH7 507 aa17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 DDIT4Q9NX09 232 aa17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 NOP53Q9NZM5 478 aaKnown RBP17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 L3MBTL1Q9Y468 752 aa17.02■□□□□ 0.32
PRKCSH-217ENST00000592741 ARL5CA6NH57 179 aa17.02■□□□□ 0.31
PRKCSH-217ENST00000592741 TNPO2O14787 897 aaKnown RBP17.02■□□□□ 0.31
PRKCSH-217ENST00000592741 IGHA2P01877 340 aa17.02■□□□□ 0.31
PRKCSH-217ENST00000592741 POLBP06746 335 aa17.02■□□□□ 0.31
PRKCSH-217ENST00000592741 CTSHP09668 335 aa17.02■□□□□ 0.31
PRKCSH-217ENST00000592741 PTPN3P26045 913 aa17.02■□□□□ 0.31
PRKCSH-217ENST00000592741 RPL9P32969 192 aaKnown RBP17.02■□□□□ 0.31
PRKCSH-217ENST00000592741 TEX44Q53QW1 395 aa17.02■□□□□ 0.31
PRKCSH-217ENST00000592741 STXBP5Q5T5C0 1151 aa17.02■□□□□ 0.31
PRKCSH-217ENST00000592741 RASSF3Q86WH2 238 aa17.02■□□□□ 0.31
PRKCSH-217ENST00000592741 RASAL3Q86YV0 1011 aa17.02■□□□□ 0.31
PRKCSH-217ENST00000592741 NSL1Q96IY1 281 aa17.02■□□□□ 0.31
PRKCSH-217ENST00000592741 TACO1Q9BSH4 297 aaKnown RBP17.02■□□□□ 0.31
PRKCSH-217ENST00000592741 BRD8Q9H0E9 1235 aa17.02■□□□□ 0.31
PRKCSH-217ENST00000592741 EBF2Q9HAK2 575 aa17.02■□□□□ 0.31
PRKCSH-217ENST00000592741 MIOSQ9NXC5 875 aa17.02■□□□□ 0.31
PRKCSH-217ENST00000592741 KCNK4Q9NYG8 393 aa17.02■□□□□ 0.31
PRKCSH-217ENST00000592741 FAM237BA0A1B0GVD1 139 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms