RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 NDUFA13Q9P0J0 144 aa15.27■□□□□ 0.03
SMARCA4-219ENST00000592604 TMEM216Q9P0N5 145 aa15.27■□□□□ 0.03
SMARCA4-219ENST00000592604 HACL1Q9UJ83 578 aa15.27■□□□□ 0.03
SMARCA4-219ENST00000592604 SMIM31A0A1B0GVY4 71 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 SOWAHBA6NEL2 793 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 CAPN15O75808 1086 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 MCF2P10911 925 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 RAG1P15918 1043 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 MAGEA8P43361 318 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 TNFAIP2Q03169 654 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 TBL3Q12788 808 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 PDK3Q15120 406 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 GOLGA7BQ2TAP0 167 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 MMEL1Q495T6 779 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 UGT2A3Q6UWM9 527 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 HPS6Q86YV9 775 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 HACE1Q8IYU2 909 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 NAT14Q8WUY8 206 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 GPR20Q99678 358 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 C11orf84Q9BUA3 381 aaPredicted RBP15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 NFKBIZQ9BYH8 718 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 CYP4F11Q9HBI6 524 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 EIF2B3Q9NR50 452 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 A0A0A0MRY4 1105 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 A0A1B0GVG6 124 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 DGKIO75912 1065 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 COX4I1P13073 169 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 PGAM1P18669 254 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 PTPN9P43378 593 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 CD151P48509 253 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 LAMB3Q13751 1172 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 TRIP10Q15642 601 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 LY6KQ17RY6 165 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 OGFRL1Q5TC84 451 aaPredicted RBP15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 TRIM50Q86XT4 487 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 PHTF2Q8N3S3 785 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 C12orf29Q8N999 325 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 HTR3CQ8WXA8 447 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 CENPIQ92674 756 aaPredicted RBP15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 SPATA13Q96N96 652 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 KCNK16Q96T55 309 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 NDNQ99608 321 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 EPAS1Q99814 870 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 RTKNQ9BST9 563 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 NAT9Q9BTE0 207 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 PRMT7Q9NVM4 692 aaPredicted RBP15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 ARHGAP26Q9UNA1 814 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 PCDHB12Q9Y5F1 795 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 PSAT1Q9Y617 370 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 PTPRFP10586 1907 aa15.26■□□□□ 0.03
SMARCA4-219ENST00000592604 HACD1B0YJ81 288 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 PAPSS1O43252 624 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 CCDC130P13994 396 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 CHN2P52757 468 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 SLC10A6Q3KNW5 377 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 FSCBQ5H9T9 825 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 PPP1R26Q5T8A7 1209 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 VWA5B1Q5TIE3 1220 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 METTL21CQ5VZV1 264 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 CASC4Q6P4E1 433 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 EPGNQ6UW88 154 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 TTC30AQ86WT1 665 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 SCUBE3Q8IX30 993 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 SLC35F5Q8WV83 523 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 CCDC124Q96CT7 223 aaKnown RBP15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 DTLQ9NZJ0 730 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 EVPLQ92817 2033 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 LOC100653049A0A140TA62 436 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 A6NJR5 290 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 GABBR2O75899 941 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 KRT34O76011 436 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 NCF2P19878 526 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 MX2P20592 715 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 SERPINB6P35237 376 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 FAM187BQ17R55 369 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 CCDC153Q494R4 210 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 PPM1JQ5JR12 505 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 ARHGAP22Q7Z5H3 698 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 ZDHHC17Q8IUH5 632 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 DRAXINQ8NBI3 349 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 ISL2Q96A47 359 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 CLMNQ96JQ2 1002 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 CSPG4P5Q96PW8 444 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 SHCBP1LQ9BZQ2 653 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 TSPYL2Q9H2G4 693 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 DHX35Q9H5Z1 703 aaKnown RBP15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 CDY2AQ9Y6F7 541 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 CDY1Q9Y6F8 540 aa15.25■□□□□ 0.03
SMARCA4-219ENST00000592604 DENRO43583 198 aaKnown RBP15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 CPA3P15088 417 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 VAV1P15498 845 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 TFE3P19532 575 aaPredicted RBP15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 TYK2P29597 1187 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 MAGEA12P43365 314 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 NUMBP49757 651 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 CRADDP78560 199 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 RBP5P82980 135 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 KLF10Q13118 480 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 ITGA9Q13797 1035 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 HSDL1Q3SXM5 330 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms