RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ERLEC1Q96DZ1 483 aa19.6■□□□□ 0.73
CCDC43-205ENST00000592333 FSCN3Q9NQT6 498 aa19.6■□□□□ 0.73
CCDC43-205ENST00000592333 GTF3C3Q9Y5Q9 886 aa19.6■□□□□ 0.73
CCDC43-205ENST00000592333 ADAMTS9Q9P2N4 1935 aa19.59■□□□□ 0.73
CCDC43-205ENST00000592333 C1QTNF9BB2RNN3 333 aa19.59■□□□□ 0.73
CCDC43-205ENST00000592333 CER1O95813 267 aa19.59■□□□□ 0.73
CCDC43-205ENST00000592333 C1QTNF9P0C862 333 aa19.59■□□□□ 0.73
CCDC43-205ENST00000592333 MAOBP27338 520 aa19.59■□□□□ 0.73
CCDC43-205ENST00000592333 ISM2Q6H9L7 571 aa19.59■□□□□ 0.73
CCDC43-205ENST00000592333 KLHL10Q6JEL2 608 aa19.59■□□□□ 0.73
CCDC43-205ENST00000592333 RRAGAQ7L523 313 aa19.59■□□□□ 0.73
CCDC43-205ENST00000592333 GLRX5Q86SX6 157 aa19.59■□□□□ 0.73
CCDC43-205ENST00000592333 KAT5Q92993 513 aa19.59■□□□□ 0.73
CCDC43-205ENST00000592333 SLC39A13Q96H72 371 aa19.59■□□□□ 0.73
CCDC43-205ENST00000592333 MED15Q96RN5 788 aa19.59■□□□□ 0.73
CCDC43-205ENST00000592333 SGK2Q9HBY8 427 aa19.59■□□□□ 0.73
CCDC43-205ENST00000592333 PRSS16Q9NQE7 514 aa19.59■□□□□ 0.73
CCDC43-205ENST00000592333 PCDHB9Q9Y5E1 797 aa19.59■□□□□ 0.73
CCDC43-205ENST00000592333 PCDHGB2Q9Y5G2 931 aa19.59■□□□□ 0.73
CCDC43-205ENST00000592333 FRYQ5TBA9 3013 aa19.58■□□□□ 0.73
CCDC43-205ENST00000592333 MUC22E2RYF6 1773 aaPredicted RBP19.58■□□□□ 0.73
CCDC43-205ENST00000592333 SPAARA0A1B0GVQ0 90 aa19.58■□□□□ 0.72
CCDC43-205ENST00000592333 TBL1XO60907 577 aa19.58■□□□□ 0.72
CCDC43-205ENST00000592333 DNTTP04053 509 aa19.58■□□□□ 0.72
CCDC43-205ENST00000592333 FYNP06241 537 aa19.58■□□□□ 0.72
CCDC43-205ENST00000592333 AFF3P51826 1226 aaKnown RBP19.58■□□□□ 0.72
CCDC43-205ENST00000592333 ST8SIA6P61647 398 aa19.58■□□□□ 0.72
CCDC43-205ENST00000592333 TRIP6Q15654 476 aaKnown RBP19.58■□□□□ 0.72
CCDC43-205ENST00000592333 TTC31Q49AM3 519 aaPredicted RBP19.58■□□□□ 0.72
CCDC43-205ENST00000592333 DBX2Q6ZNG2 339 aa19.58■□□□□ 0.72
CCDC43-205ENST00000592333 USP30Q70CQ3 517 aa19.58■□□□□ 0.72
CCDC43-205ENST00000592333 TMEM110Q86TL2 294 aa19.58■□□□□ 0.72
CCDC43-205ENST00000592333 MFN1Q8IWA4 741 aa19.58■□□□□ 0.72
CCDC43-205ENST00000592333 SCUBE3Q8IX30 993 aa19.58■□□□□ 0.72
CCDC43-205ENST00000592333 ZCCHC9Q8N567 271 aaKnown RBP19.58■□□□□ 0.72
CCDC43-205ENST00000592333 LMLNQ96KR4 655 aa19.58■□□□□ 0.72
CCDC43-205ENST00000592333 FCRL2Q96LA5 508 aaPredicted RBP19.58■□□□□ 0.72
CCDC43-205ENST00000592333 KREMEN1Q96MU8 473 aa19.58■□□□□ 0.72
CCDC43-205ENST00000592333 SLC4A5Q9BY07 1137 aa19.58■□□□□ 0.72
CCDC43-205ENST00000592333 BTBD1Q9H0C5 482 aa19.58■□□□□ 0.72
CCDC43-205ENST00000592333 CHD6Q8TD26 2715 aa19.57■□□□□ 0.72
CCDC43-205ENST00000592333 HLA-EP13747 358 aa19.57■□□□□ 0.72
CCDC43-205ENST00000592333 PRKCSHP14314 528 aaPredicted RBP19.57■□□□□ 0.72
CCDC43-205ENST00000592333 SLC6A4P31645 630 aa19.57■□□□□ 0.72
CCDC43-205ENST00000592333 MATKP42679 507 aa19.57■□□□□ 0.72
CCDC43-205ENST00000592333 MTA1Q13330 715 aa19.57■□□□□ 0.72
CCDC43-205ENST00000592333 RFWD3Q6PCD5 774 aa19.57■□□□□ 0.72
CCDC43-205ENST00000592333 RAB44Q7Z6P3 723 aaPredicted RBP19.57■□□□□ 0.72
CCDC43-205ENST00000592333 NAXDQ8IW45 347 aa19.57■□□□□ 0.72
CCDC43-205ENST00000592333 ARHGEF19Q8IW93 802 aa19.57■□□□□ 0.72
CCDC43-205ENST00000592333 DQX1Q8TE96 717 aaKnown RBP19.57■□□□□ 0.72
CCDC43-205ENST00000592333 CLEC4CQ8WTT0 213 aa19.57■□□□□ 0.72
CCDC43-205ENST00000592333 CYB5D2Q8WUJ1 264 aa19.57■□□□□ 0.72
CCDC43-205ENST00000592333 SRRTQ9BXP5 876 aaKnown RBP19.57■□□□□ 0.72
CCDC43-205ENST00000592333 MIS12Q9H081 205 aa19.57■□□□□ 0.72
CCDC43-205ENST00000592333 INTS2Q9H0H0 1204 aaKnown RBP19.57■□□□□ 0.72
CCDC43-205ENST00000592333 MIR1-1HGQ9H1L0 117 aa19.57■□□□□ 0.72
CCDC43-205ENST00000592333 RSPH9Q9H1X1 276 aaPredicted RBP19.57■□□□□ 0.72
CCDC43-205ENST00000592333 EIF2B4Q9UI10 523 aaKnown RBP19.57■□□□□ 0.72
CCDC43-205ENST00000592333 CTNND2Q9UQB3 1225 aa19.57■□□□□ 0.72
CCDC43-205ENST00000592333 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.57■□□□□ 0.72
CCDC43-205ENST00000592333 ZFHX4Q86UP3 3567 aa19.56■□□□□ 0.72
CCDC43-205ENST00000592333 SH3BP5O60239 455 aa19.56■□□□□ 0.72
CCDC43-205ENST00000592333 MOCS3O95396 460 aa19.56■□□□□ 0.72
CCDC43-205ENST00000592333 SRPRAP08240 638 aaKnown RBP19.56■□□□□ 0.72
CCDC43-205ENST00000592333 CD70P32970 193 aa19.56■□□□□ 0.72
CCDC43-205ENST00000592333 SGSHP51688 502 aa19.56■□□□□ 0.72
CCDC43-205ENST00000592333 RPS14P62263 151 aaKnown RBP19.56■□□□□ 0.72
CCDC43-205ENST00000592333 TEAD4Q15561 434 aa19.56■□□□□ 0.72
CCDC43-205ENST00000592333 MS4A13Q5J8X5 152 aa19.56■□□□□ 0.72
CCDC43-205ENST00000592333 ZNF776Q68DI1 518 aaPredicted RBP19.56■□□□□ 0.72
CCDC43-205ENST00000592333 NADSYN1Q6IA69 706 aa19.56■□□□□ 0.72
CCDC43-205ENST00000592333 ZNF606Q8WXB4 792 aa19.56■□□□□ 0.72
CCDC43-205ENST00000592333 ADAMTS14Q8WXS8 1223 aa19.56■□□□□ 0.72
CCDC43-205ENST00000592333 FAM149B1Q96BN6 582 aa19.56■□□□□ 0.72
CCDC43-205ENST00000592333 BTN2A3PQ96KV6 586 aa19.56■□□□□ 0.72
CCDC43-205ENST00000592333 THAP9Q9H5L6 903 aa19.56■□□□□ 0.72
CCDC43-205ENST00000592333 GAREM1Q9H706 876 aa19.56■□□□□ 0.72
CCDC43-205ENST00000592333 POPDC2Q9HBU9 364 aa19.56■□□□□ 0.72
CCDC43-205ENST00000592333 UBE2TQ9NPD8 197 aaPredicted RBP19.56■□□□□ 0.72
CCDC43-205ENST00000592333 ST7Q9NRC1 585 aa19.56■□□□□ 0.72
CCDC43-205ENST00000592333 KIAA1522Q9P206 1035 aaPredicted RBP19.56■□□□□ 0.72
CCDC43-205ENST00000592333 ZMIZ1Q9ULJ6 1067 aa19.56■□□□□ 0.72
CCDC43-205ENST00000592333 TPX2Q9ULW0 747 aaKnown RBP19.56■□□□□ 0.72
CCDC43-205ENST00000592333 NCKAP1Q9Y2A7 1128 aa19.56■□□□□ 0.72
CCDC43-205ENST00000592333 GOLGA6L7A0A1B0GV03 622 aa19.55■□□□□ 0.72
CCDC43-205ENST00000592333 TARSL2A2RTX5 802 aaKnown RBP19.55■□□□□ 0.72
CCDC43-205ENST00000592333 PIK3R2O00459 728 aa19.55■□□□□ 0.72
CCDC43-205ENST00000592333 CAPN9O14815 690 aa19.55■□□□□ 0.72
CCDC43-205ENST00000592333 HYAL3O43820 417 aaPredicted RBP19.55■□□□□ 0.72
CCDC43-205ENST00000592333 RNASEH1O60930 286 aaKnown RBP19.55■□□□□ 0.72
CCDC43-205ENST00000592333 CBFA2T3O75081 653 aa19.55■□□□□ 0.72
CCDC43-205ENST00000592333 SEMA4FO95754 770 aa19.55■□□□□ 0.72
CCDC43-205ENST00000592333 APOEP02649 317 aa19.55■□□□□ 0.72
CCDC43-205ENST00000592333 GLI1P08151 1106 aa19.55■□□□□ 0.72
CCDC43-205ENST00000592333 SLC2A3P11169 496 aa19.55■□□□□ 0.72
CCDC43-205ENST00000592333 ACSL1P33121 698 aa19.55■□□□□ 0.72
CCDC43-205ENST00000592333 GRIA4P48058 902 aa19.55■□□□□ 0.72
CCDC43-205ENST00000592333 YWHAZP63104 245 aaKnown RBP19.55■□□□□ 0.72
CCDC43-205ENST00000592333 SLC12A1Q13621 1099 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms