RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 TDRD12Q587J7 1177 aaKnown RBP10.43□□□□□ -0.74
BRCA1-227ENST00000591849 FAM133BQ5BKY9 247 aaKnown RBP10.43□□□□□ -0.74
BRCA1-227ENST00000591849 MPP7Q5T2T1 576 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 NADSYN1Q6IA69 706 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 ACAD10Q6JQN1 1059 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 DNAJC24Q6P3W2 148 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 LRRC31Q6UY01 552 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 CHST9Q7L1S5 443 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 VPS36Q86VN1 386 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 CFAP52Q8N1V2 620 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 HMGB4Q8WW32 186 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 BAP1Q92560 729 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 NELL1Q92832 810 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 ERLEC1Q96DZ1 483 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 RPRD1AQ96P16 312 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-227ENST00000591849 TBCBQ99426 244 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.43□□□□□ -0.74
BRCA1-227ENST00000591849 TKTL2Q9H0I9 626 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 ELOVL2Q9NXB9 296 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 GMEB2Q9UKD1 530 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 CLEC4EQ9ULY5 219 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 SMG5Q9UPR3 1016 aaKnown RBP10.43□□□□□ -0.74
BRCA1-227ENST00000591849 LUC7L2Q9Y383 392 aaKnown RBP10.43□□□□□ -0.74
BRCA1-227ENST00000591849 STARD13Q9Y3M8 1113 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 COL4A2P08572 1712 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-227ENST00000591849 CCDC163A0A0D9SF12 145 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 ANTXRLA6NF34 631 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 GFRA2O00451 464 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 NPC1O15118 1278 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 HRO43593 1189 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 LILRB5O75023 590 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 IGLV3-25P01717 112 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 UNGP13051 313 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-227ENST00000591849 TDGF1P13385 188 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 RDXP35241 583 aaKnown RBP10.42□□□□□ -0.74
BRCA1-227ENST00000591849 SGSHP51688 502 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 ST8SIA6P61647 398 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 CENPCQ03188 943 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 C1QBPQ07021 282 aaKnown RBP10.42□□□□□ -0.74
BRCA1-227ENST00000591849 SRSF5Q13243 272 aaKnown RBP10.42□□□□□ -0.74
BRCA1-227ENST00000591849 ZNF177Q13360 481 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-227ENST00000591849 EIF4HQ15056 248 aaKnown RBP10.42□□□□□ -0.74
BRCA1-227ENST00000591849 CDO1Q16878 200 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 TSR1Q2NL82 804 aaKnown RBP10.42□□□□□ -0.74
BRCA1-227ENST00000591849 ARL13BQ3SXY8 428 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 FNDC3BQ53EP0 1204 aaKnown RBP10.42□□□□□ -0.74
BRCA1-227ENST00000591849 BRMS1LQ5PSV4 323 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 MBLAC2Q68D91 279 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 DCUN1D2Q6PH85 259 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 SERPINA13PQ6UXR4 307 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 IRF2BP2Q7Z5L9 587 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-227ENST00000591849 PHF13Q86YI8 300 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-227ENST00000591849 AHI1Q8N157 1196 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 EMC1Q8N766 993 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 RXFP2Q8WXD0 754 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 RUBCNQ92622 972 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 CFAP57Q96MR6 1250 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 PPP1R9BQ96SB3 815 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 ACOX2Q99424 681 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 NPY6RQ99463 290 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 TPSD1Q9BZJ3 242 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 HAUS4Q9H6D7 363 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 CACNA2D2Q9NY47 1150 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 AIPL1Q9NZN9 384 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 KIAA1522Q9P206 1035 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-227ENST00000591849 EBF1Q9UH73 591 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 XPO7Q9UIA9 1087 aaKnown RBP10.42□□□□□ -0.74
BRCA1-227ENST00000591849 GGA2Q9UJY4 613 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 TMEM59LQ9UK28 342 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 INVSQ9Y283 1065 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 BZW2Q9Y6E2 419 aaKnown RBP10.42□□□□□ -0.74
BRCA1-227ENST00000591849 STON1Q9Y6Q2 735 aa10.42□□□□□ -0.74
BRCA1-227ENST00000591849 HELZP42694 1942 aaKnown RBP10.42□□□□□ -0.74
BRCA1-227ENST00000591849 PAGE1O75459 146 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 RHOBTB1O94844 696 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 ADCY5O95622 1261 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 SKILP12757 684 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 HNRNPLP14866 589 aaKnown RBP eCLIP10.41□□□□□ -0.74
BRCA1-227ENST00000591849 HLA-FP30511 346 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 HOXC13P31276 330 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 FLT3P36888 993 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 CXCR3P49682 368 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 OXCT1P55809 520 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 ZBED6P86452 979 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 ELF2Q15723 593 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 FIGNQ5HY92 759 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 TTC39BQ5VTQ0 682 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-227ENST00000591849 RNF219Q5W0B1 726 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-227ENST00000591849 KIAA1324Q6UXG2 1013 aaKnown RBP10.41□□□□□ -0.74
BRCA1-227ENST00000591849 TMEM92Q6UXU6 159 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 ARCQ7LC44 396 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 ERMP1Q7Z2K6 904 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 MCOLN2Q8IZK6 566 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 FIBINQ8TAL6 211 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 CYB5D2Q8WUJ1 264 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 GAB3Q8WWW8 586 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 SORCS1Q8WY21 1168 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 SPACA7Q96KW9 195 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms