RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 DENND3A2RUS2 1198 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 FSCN2O14926 492 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 SNPHO15079 494 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 HOXC11O43248 304 aaPredicted RBP12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 OVGP1Q12889 678 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 DACT2Q5SW24 774 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 IZUMO3Q5VZ72 239 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 TTC7BQ86TV6 843 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 TRUB1Q8WWH5 349 aaKnown RBP12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 NLRP7Q8WX94 980 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 METTL2AQ96IZ6 378 aaKnown RBP12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 TTC25Q96NG3 672 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 PLEKHA5Q9HAU0 1116 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 STMN3Q9NZ72 180 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 NINJ2Q9NZG7 142 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 GRID1Q9ULK0 1009 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 HNRNPDLO14979 420 aaKnown RBP12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 MTA2O94776 668 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 EIF2AK2P19525 551 aaKnown RBP12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 SP4Q02446 784 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 CREB5Q02930 508 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 DNAL1Q4LDG9 190 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 RABGAP1LQ5R372 815 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 PPM1LQ5SGD2 360 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 NDUFAF5Q5TEU4 345 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 OTOP3Q7RTS5 596 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 SLC15A4Q8N697 577 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 MAP6Q96JE9 813 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 CFAP57Q96MR6 1250 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 SP140LQ9H930 580 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 VPS45Q9NRW7 570 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 C1orf112Q9NSG2 853 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 KLHL11Q9NVR0 708 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 ARMCX1Q9P291 453 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 EPS15L1Q9UBC2 864 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 PLA2G4CQ9UP65 541 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 CPQQ9Y646 472 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 EXOC1LA0A1B0GW35 172 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 CASQ2O14958 399 aaPredicted RBP12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 DMP1Q13316 513 aaPredicted RBP12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 MTMR1Q13613 665 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 EFHC1Q5JVL4 640 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 CCDC89Q8N998 374 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 TERB1Q8NA31 727 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 IL31RAQ8NI17 732 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 HSPH1Q92598 858 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 C11orf70Q9BRQ4 267 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 MROQ9BYG7 248 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 C17orf75Q9HAS0 396 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 IP6K2Q9UHH9 426 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 POLHQ9Y253 713 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 SMCHD1A6NHR9 2005 aa12.56□□□□□ -0.4
SMARCA4-217ENST00000591595 M0QX08 132 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 ATF7P17544 494 aaPredicted RBP12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 CD58P19256 250 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 CDK16Q00536 496 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 ANO4Q32M45 955 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 TICAM1Q8IUC6 712 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 KBTBD7Q8WVZ9 684 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 STRA6Q9BX79 667 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 DCLK3Q9C098 648 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 CLPBQ9H078 707 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 HIPK3Q9H422 1215 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 SERHL2Q9H4I8 314 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 TMEM8AQ9HCN3 771 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 KMT5AQ9NQR1 393 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 TXNDC16Q9P2K2 825 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 GPC4O75487 556 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 BMP10O95393 424 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 TNNI1P19237 187 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 MLLT3P42568 568 aaPredicted RBP12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 CBX5P45973 191 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 PDK1Q15118 436 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 SCARA3Q6AZY7 606 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 FAM122CQ6P4D5 195 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 KYAT3Q6YP21 454 aaKnown RBP12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 SV2AQ7L0J3 742 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 VPS37BQ9H9H4 285 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 SAYSD1Q9NPB0 183 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 ANLNQ9NQW6 1124 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 LGALS13Q9UHV8 139 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 SERPINA10Q9UK55 444 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 TMX2Q9Y320 296 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 BTAF1O14981 1849 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 FAM172BPA6NC97 362 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 NFIBO00712 420 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 PRLP01236 227 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 ENO1P06733 434 aaKnown RBP12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 GSTM1P09488 218 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 CETPP11597 493 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 RAG1P15918 1043 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 ALDH1A3P47895 512 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 SOX10P56693 466 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 GTF2BQ00403 316 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 CAV1Q03135 178 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 BNIP3Q12983 259 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 AOC3Q16853 763 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 CLEC16AQ2KHT3 1053 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 OGFRL1Q5TC84 451 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms