RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 TMCO5BA8MYB1 307 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 PRRT4C9JH25 899 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 NPC1O15118 1278 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 TIMM44O43615 452 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 RTN2O75298 545 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 PAGE1O75459 146 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 ENDOD1O94919 500 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 KLF8O95600 359 aaPredicted RBP12.31□□□□□ -0.44
LIG3-213ENST00000590630 FTLP02792 175 aaPredicted RBP12.31□□□□□ -0.44
LIG3-213ENST00000590630 RRM1P23921 792 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 HLA-FP30511 346 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 RFC1P35251 1148 aaPredicted RBP12.31□□□□□ -0.44
LIG3-213ENST00000590630 PLA2G5P39877 138 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 RPS24P62847 133 aaKnown RBP12.31□□□□□ -0.44
LIG3-213ENST00000590630 ATP11AP98196 1134 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 DMC1Q14565 340 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 GEN1Q17RS7 908 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 CCDC14Q49A88 953 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 EOGTQ5NDL2 527 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 RABGAP1LQ5R372 815 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 STRADAQ7RTN6 431 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 CCDC117Q8IWD4 279 aaPredicted RBP12.31□□□□□ -0.44
LIG3-213ENST00000590630 LGI2Q8N0V4 545 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 ALLCQ8N6M5 410 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.31□□□□□ -0.44
LIG3-213ENST00000590630 ZBTB44Q8NCP5 570 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 OR8K1Q8NGG5 319 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 JOSD2Q8TAC2 188 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 WFIKKN2Q8TEU8 576 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 UCMAQ8WVF2 138 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 ATRIPQ8WXE1 791 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 FAM122AQ96E09 287 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 TRIM11Q96F44 468 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 DNAJC7Q99615 494 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 TKTL2Q9H0I9 626 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 RBSNQ9H1K0 784 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 PARVAQ9NVD7 372 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 ADAMTS1Q9UHI8 967 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 CLEC4EQ9ULY5 219 aa12.31□□□□□ -0.44
LIG3-213ENST00000590630 CKAP5Q14008 2032 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 RIF1Q5UIP0 2472 aaKnown RBP12.3□□□□□ -0.44
LIG3-213ENST00000590630 ADCY5O95622 1261 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 MYBL1P10243 752 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 HNRNPLP14866 589 aaKnown RBP eCLIP12.3□□□□□ -0.44
LIG3-213ENST00000590630 DESP17661 470 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 GPD1P21695 349 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 NTSR1P30989 418 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 DGKEP52429 567 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 ZNF143P52747 638 aaPredicted RBP12.3□□□□□ -0.44
LIG3-213ENST00000590630 MAMLD1Q13495 774 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 CDH18Q13634 790 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 AUHQ13825 339 aaKnown RBP12.3□□□□□ -0.44
LIG3-213ENST00000590630 ARID5BQ14865 1188 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 CRY1Q16526 586 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 TSR1Q2NL82 804 aaKnown RBP12.3□□□□□ -0.44
LIG3-213ENST00000590630 PPP1R15BQ5SWA1 713 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 EMC10Q5UCC4 262 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 EGFLAMQ63HQ2 1017 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 PLEKHA7Q6IQ23 1121 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 DCUN1D2Q6PH85 259 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 WDR59Q6PJI9 974 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 KIAA0907Q7Z7F0 614 aaPredicted RBP12.3□□□□□ -0.44
LIG3-213ENST00000590630 MFN1Q8IWA4 741 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 AHI1Q8N157 1196 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 CFAP52Q8N1V2 620 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 CCDC33Q8N5R6 958 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 TXNDC5Q8NBS9 432 aaKnown RBP12.3□□□□□ -0.44
LIG3-213ENST00000590630 FIBINQ8TAL6 211 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 CENPIQ92674 756 aaPredicted RBP12.3□□□□□ -0.44
LIG3-213ENST00000590630 MYEOVQ96EZ4 313 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 C1orf74Q96LT6 269 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 MCEEQ96PE7 176 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 HAPLN3Q96S86 360 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.3□□□□□ -0.44
LIG3-213ENST00000590630 ISCUQ9H1K1 167 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 SEMA4AQ9H3S1 761 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 ABCB8Q9NUT2 735 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 FAM86C1Q9NVL1 165 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 ZNHIT6Q9NWK9 470 aaKnown RBP12.3□□□□□ -0.44
LIG3-213ENST00000590630 ELOVL2Q9NXB9 296 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 STIM2Q9P246 746 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 GGA2Q9UJY4 613 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 HS3ST4Q9Y661 456 aa12.3□□□□□ -0.44
LIG3-213ENST00000590630 ZNF292O60281 2723 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 MUC22E2RYF6 1773 aaPredicted RBP12.29□□□□□ -0.44
LIG3-213ENST00000590630 A0A1B0GVM2 712 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 ANTXRLA6NF34 631 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 TCAF2A6NFQ2 919 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 PROB1E7EW31 1015 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 I6L893 689 aaPredicted RBP12.29□□□□□ -0.44
LIG3-213ENST00000590630 SGK1O00141 431 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 LILRB5O75023 590 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 ADAM23O75077 832 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 MFAP3LO75121 409 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 LUC7L3O95232 432 aaKnown RBP12.29□□□□□ -0.44
LIG3-213ENST00000590630 GJB6O95452 261 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 APBB3O95704 486 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 PLEKP08567 350 aaPredicted RBP12.29□□□□□ -0.44
LIG3-213ENST00000590630 PABPC1P11940 636 aaKnown RBP12.29□□□□□ -0.44
LIG3-213ENST00000590630 ATXN1P54253 815 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms