RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 CA9Q16790 459 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 GAB4Q2WGN9 574 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 ITPRIPL2Q3MIP1 535 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 MPPE1Q53F39 396 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 LY6G5CQ5SRR4 150 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 TTC39BQ5VTQ0 682 aaPredicted RBP12.46□□□□□ -0.41
APOC1-206ENST00000590334 FYB2Q5VWT5 728 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 FBXL22Q6P050 247 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 RFWD3Q6PCD5 774 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 C14orf80Q86SX3 495 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 CHSY1Q86X52 802 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 GJD3Q8N144 294 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 PYROXD2Q8N2H3 581 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 CPA6Q8N4T0 437 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 TRIM58Q8NG06 486 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 TRIM44Q96DX7 344 aaPredicted RBP12.46□□□□□ -0.41
APOC1-206ENST00000590334 MYEOVQ96EZ4 313 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 P2RY11Q96G91 374 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 MAGEB5Q9BZ81 275 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 SIK2Q9H0K1 926 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 RETREG1Q9H6L5 497 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 ECT2Q9H8V3 914 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 ZWILCHQ9H900 591 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 CD320Q9NPF0 282 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 TRMT1Q9NXH9 659 aaKnown RBP12.46□□□□□ -0.41
APOC1-206ENST00000590334 NEU3Q9UQ49 428 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 HYOU1Q9Y4L1 999 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 VCANP13611 3396 aa12.46□□□□□ -0.42
APOC1-206ENST00000590334 FAM72CH0Y354 149 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 NARSO43776 548 aaKnown RBP12.45□□□□□ -0.42
APOC1-206ENST00000590334 ADH1CP00326 375 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 GLULP15104 373 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 CTNNA2P26232 953 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 CTNNA1P35221 906 aaKnown RBP12.45□□□□□ -0.42
APOC1-206ENST00000590334 SSR1P43307 286 aaKnown RBP12.45□□□□□ -0.42
APOC1-206ENST00000590334 HCAR3P49019 387 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 SGSHP51688 502 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 VCPP55072 806 aaKnown RBP12.45□□□□□ -0.42
APOC1-206ENST00000590334 PFKPQ01813 784 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 NR1H3Q13133 447 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 SMTNL2Q2TAL5 461 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 ATP13A4Q4VNC1 1196 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 KCNT1Q5JUK3 1230 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 RABGAP1LQ5R372 815 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 FAM72AQ5TYM5 149 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 FAM72DQ6L9T8 149 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 LRRC31Q6UY01 552 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 PEX26Q7Z412 305 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 FAM72BQ86X60 149 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 VSIG1Q86XK7 387 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 UBALD2Q8IYN6 164 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 LGI2Q8N0V4 545 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 HJURPQ8NCD3 748 aaPredicted RBP12.45□□□□□ -0.42
APOC1-206ENST00000590334 TSC1Q92574 1164 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 IGSF8Q969P0 613 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 TMA16Q96EY4 203 aaKnown RBP12.45□□□□□ -0.42
APOC1-206ENST00000590334 HES6Q96HZ4 224 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 ALS2CR12Q96Q35 445 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 KCTD15Q96SI1 283 aaPredicted RBP12.45□□□□□ -0.42
APOC1-206ENST00000590334 DHX35Q9H5Z1 703 aaKnown RBP12.45□□□□□ -0.42
APOC1-206ENST00000590334 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.45□□□□□ -0.42
APOC1-206ENST00000590334 GPATCH2LQ9NWQ4 482 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 DDX56Q9NY93 547 aaKnown RBP12.45□□□□□ -0.42
APOC1-206ENST00000590334 GTSE1Q9NYZ3 720 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.45□□□□□ -0.42
APOC1-206ENST00000590334 RCOR3Q9P2K3 495 aaPredicted RBP12.45□□□□□ -0.42
APOC1-206ENST00000590334 FBXO10Q9UK96 956 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 AMFRQ9UKV5 643 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 VANGL2Q9ULK5 521 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 ZKSCAN5Q9Y2L8 839 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 PCDHA3Q9Y5H8 950 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 SNX10Q9Y5X0 201 aa12.45□□□□□ -0.42
APOC1-206ENST00000590334 CCDC66A2RUB6 948 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 C3orf70A6NLC5 250 aaPredicted RBP12.44□□□□□ -0.42
APOC1-206ENST00000590334 MIF4GDA9UHW6 222 aaKnown RBP12.44□□□□□ -0.42
APOC1-206ENST00000590334 ZNF487B1APH4 448 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 TRDMT1O14717 391 aaKnown RBP12.44□□□□□ -0.42
APOC1-206ENST00000590334 CACNG3O60359 315 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 TSPAN3O60637 253 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 LRIG2O94898 1065 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 CYBBP04839 570 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 ADH5P11766 374 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 TYRP14679 529 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 HOXD9P28356 352 aaPredicted RBP12.44□□□□□ -0.42
APOC1-206ENST00000590334 GGCXP38435 758 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 PEX5P50542 639 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 GAD2Q05329 585 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 PDK2Q15119 407 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 MEI1Q5TIA1 1274 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 TPGS1Q6ZTW0 290 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 CHST9Q7L1S5 443 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 ETFBKMTQ8IXQ9 262 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 KATNAL2Q8IYT4 538 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 CSGALNACT1Q8TDX6 532 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 HSPH1Q92598 858 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 TBC1D31Q96DN5 1066 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 CHFRQ96EP1 664 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 MSANTD3Q96H12 275 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 RPRD1AQ96P16 312 aaPredicted RBP12.44□□□□□ -0.42
APOC1-206ENST00000590334 EPAS1Q99814 870 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms