RNA–Protein interactions for RNA: ENST00000590049.5

CAPNS1-209, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5

Gene CAPNS1, Length 592 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-209ENST00000590049 RRAGAQ7L523 313 aa12.14□□□□□ -0.47
CAPNS1-209ENST00000590049 CCDC186Q7Z3E2 898 aa12.14□□□□□ -0.47
CAPNS1-209ENST00000590049 ITIH5Q86UX2 942 aa12.14□□□□□ -0.47
CAPNS1-209ENST00000590049 PTRH1Q86Y79 214 aaKnown RBP12.14□□□□□ -0.47
CAPNS1-209ENST00000590049 TTC39CQ8N584 583 aa12.14□□□□□ -0.47
CAPNS1-209ENST00000590049 OR8K1Q8NGG5 319 aa12.14□□□□□ -0.47
CAPNS1-209ENST00000590049 LMO3Q8TAP4 145 aa12.14□□□□□ -0.47
CAPNS1-209ENST00000590049 RIN3Q8TB24 985 aa12.14□□□□□ -0.47
CAPNS1-209ENST00000590049 STK33Q9BYT3 514 aa12.14□□□□□ -0.47
CAPNS1-209ENST00000590049 CXCL16Q9H2A7 254 aa12.14□□□□□ -0.47
CAPNS1-209ENST00000590049 GANQ9H2C0 597 aa12.14□□□□□ -0.47
CAPNS1-209ENST00000590049 VRTNQ9H8Y1 702 aa12.14□□□□□ -0.47
CAPNS1-209ENST00000590049 SIX4Q9UIU6 781 aa12.14□□□□□ -0.47
CAPNS1-209ENST00000590049 MYO6Q9UM54 1294 aa12.14□□□□□ -0.47
CAPNS1-209ENST00000590049 PLAAQ9Y263 795 aa12.14□□□□□ -0.47
CAPNS1-209ENST00000590049 ANKHD1Q8IWZ3 2542 aaKnown RBP12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 CBX4O00257 560 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 PIRO00625 290 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 HUS1O60921 280 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 KRT5P13647 590 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 LSSP48449 732 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 ADKP55263 362 aaKnown RBP12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 SOX4Q06945 474 aaPredicted RBP12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 TBX2Q13207 712 aaPredicted RBP12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 MTF1Q14872 753 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 DRAP1Q14919 205 aaPredicted RBP12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 ASIC2Q16515 512 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 UPP1Q16831 310 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 EML3Q32P44 896 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 EMC10Q5UCC4 262 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 GJB7Q6PEY0 223 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 SCARA5Q6ZMJ2 495 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 USP53Q70EK8 1073 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 ATCAYQ86WG3 371 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 ARHGEF19Q8IW93 802 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 C3orf58Q8NDZ4 430 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 TATDN2Q93075 761 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 IGSF8Q969P0 613 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 JAKMIP2Q96AA8 810 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 CYP3A43Q9HB55 503 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 SIX2Q9NPC8 291 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 ASCL3Q9NQ33 180 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 GEMIN8Q9NWZ8 242 aaKnown RBP12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 PCDHB1Q9Y5F3 818 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 SNX11Q9Y5W9 270 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 SNX9Q9Y5X1 595 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 MED13LQ71F56 2210 aa12.13□□□□□ -0.47
CAPNS1-209ENST00000590049 LRRC53A6NM62 1247 aa12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 KPNA7A9QM74 516 aa12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 EPHB6O15197 1021 aa12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 PAPSS1O43252 624 aaPredicted RBP12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 NOL4O94818 638 aa12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 NCAM1P13591 858 aa12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 FERP16591 822 aa12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 SOX5P35711 763 aa12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 KIR2DL1P43626 348 aaPredicted RBP12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 CSNK1EP49674 416 aaKnown RBP12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 APBA1Q02410 837 aa12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 DUSP4Q13115 394 aa12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 FHL5Q5TD97 284 aa12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 METTL23Q86XA0 190 aa12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 MAB21L3Q8N8X9 362 aa12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 CCDC112Q8NEF3 446 aa12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 APPL2Q8NEU8 664 aa12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 CCNL2Q96S94 520 aaPredicted RBP12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 TTYH3Q9C0H2 523 aa12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 XYLT2Q9H1B5 865 aa12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 APOBEC3GQ9HC16 384 aaKnown RBP12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 ZDHHC4Q9NPG8 344 aa12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 ABHD10Q9NUJ1 306 aa12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 PCDHB4Q9Y5E5 795 aa12.12□□□□□ -0.47
CAPNS1-209ENST00000590049 WIPF3A6NGB9 483 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 F8VZ95 297 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 DIAPH2O60879 1101 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 CD58P19256 250 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 CD6P30203 668 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 DEKP35659 375 aaKnown RBP12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 AFF3P51826 1226 aaKnown RBP12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 BPIFB4P59827 614 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 LILRA4P59901 499 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 INSM1Q01101 510 aaPredicted RBP12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 IL9RQ01113 521 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 ARID5AQ03989 594 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 USP4Q13107 963 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 ZNF268Q14587 947 aaPredicted RBP12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 TDRD12Q587J7 1177 aaKnown RBP12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 SMYD5Q6GMV2 418 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 MAMDC2Q7Z304 686 aaPredicted RBP12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 VPS36Q86VN1 386 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 SFTPA1Q8IWL2 248 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 CADM4Q8NFZ8 388 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 CXorf38Q8TB03 319 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 SYN2Q92777 582 aaPredicted RBP12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 SGF29Q96ES7 293 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 PANX2Q96RD6 677 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 NAA15Q9BXJ9 866 aaKnown RBP12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 CRISPLD1Q9H336 500 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 SNX25Q9H3E2 840 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 DEF6Q9H4E7 631 aa12.11□□□□□ -0.47
CAPNS1-209ENST00000590049 POLR1BQ9H9Y6 1135 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms