RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 FLCNQ8NFG4 579 aa23.21■■□□□ 1.31
R3HDM4-205ENST00000589445 FAM3CQ92520 227 aa23.21■■□□□ 1.31
R3HDM4-205ENST00000589445 CHFRQ96EP1 664 aa23.21■■□□□ 1.31
R3HDM4-205ENST00000589445 MYEOVQ96EZ4 313 aa23.21■■□□□ 1.31
R3HDM4-205ENST00000589445 XPO6Q96QU8 1125 aaKnown RBP23.21■■□□□ 1.31
R3HDM4-205ENST00000589445 PEBP4Q96S96 227 aa23.21■■□□□ 1.31
R3HDM4-205ENST00000589445 KCNH6Q9H252 994 aa23.21■■□□□ 1.31
R3HDM4-205ENST00000589445 GPATCH2LQ9NWQ4 482 aa23.21■■□□□ 1.31
R3HDM4-205ENST00000589445 TECTAO75443 2155 aa23.21■■□□□ 1.31
R3HDM4-205ENST00000589445 PROSCO94903 275 aa23.2■■□□□ 1.3
R3HDM4-205ENST00000589445 ADRA1BP35368 520 aa23.2■■□□□ 1.3
R3HDM4-205ENST00000589445 NAP1L1P55209 391 aaKnown RBP23.2■■□□□ 1.3
R3HDM4-205ENST00000589445 RPS24P62847 133 aaKnown RBP23.2■■□□□ 1.3
R3HDM4-205ENST00000589445 AUHQ13825 339 aaKnown RBP23.2■■□□□ 1.3
R3HDM4-205ENST00000589445 ZNF852Q6ZMS4 543 aa23.2■■□□□ 1.3
R3HDM4-205ENST00000589445 CPNE8Q86YQ8 564 aa23.2■■□□□ 1.3
R3HDM4-205ENST00000589445 NIPA2Q8N8Q9 360 aa23.2■■□□□ 1.3
R3HDM4-205ENST00000589445 NTAN1Q96AB6 310 aa23.2■■□□□ 1.3
R3HDM4-205ENST00000589445 TMA16Q96EY4 203 aaKnown RBP23.2■■□□□ 1.3
R3HDM4-205ENST00000589445 PRMT1Q99873 361 aaKnown RBP23.2■■□□□ 1.3
R3HDM4-205ENST00000589445 FOXQ1Q9C009 403 aa23.2■■□□□ 1.3
R3HDM4-205ENST00000589445 ZWILCHQ9H900 591 aa23.2■■□□□ 1.3
R3HDM4-205ENST00000589445 LCMT1Q9UIC8 334 aa23.2■■□□□ 1.3
R3HDM4-205ENST00000589445 DOCK4Q8N1I0 1966 aa23.2■■□□□ 1.3
R3HDM4-205ENST00000589445 MAN2B1O00754 1011 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 CACNG3O60359 315 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 MTA2O94776 668 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 PDGFBP01127 241 aaPredicted RBP23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 PENKP01210 267 aaPredicted RBP23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 GLULP15104 373 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 TCF4P15884 667 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 HOXD9P28356 352 aaPredicted RBP23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 OPRD1P41143 372 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 ACAP1Q15027 740 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 SMTNL2Q2TAL5 461 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 GRAMD4Q6IC98 578 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 C1orf228Q6PIY5 440 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 LRRC31Q6UY01 552 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 ARFGAP1Q8N6T3 406 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 CD101Q93033 1021 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 EXOC4Q96A65 974 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 P2RY11Q96G91 374 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 HAPLN3Q96S86 360 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 P2RY13Q9BPV8 354 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 NCAPGQ9BPX3 1015 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 SNRNP25Q9BV90 132 aaKnown RBP23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 USP18Q9UMW8 372 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 AP4E1Q9UPM8 1137 aa23.19■■□□□ 1.3
R3HDM4-205ENST00000589445 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 E9PAM4 449 aa23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 BUB1O43683 1085 aa23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 SRGAP2O75044 1071 aa23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 TULP3O75386 442 aa23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 SLC6A11P48066 632 aa23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 IRAK1P51617 712 aa23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 AIF1P55008 147 aa23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 SCAPQ12770 1279 aa23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 KIF5AQ12840 1032 aa23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 CDH18Q13634 790 aa23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 TTC39BQ5VTQ0 682 aaPredicted RBP23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 FBXL22Q6P050 247 aa23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 C14orf80Q86SX3 495 aa23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 CCDC117Q8IWD4 279 aaPredicted RBP23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 CARNMT1Q8N4J0 409 aa23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 LACRTQ9GZZ8 138 aa23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 DHX35Q9H5Z1 703 aaKnown RBP23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 ARHGEF4Q9NR80 690 aa23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 DEC1Q9P2X7 70 aa23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 TRIM10Q9UDY6 481 aa23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 FZD10Q9ULW2 581 aa23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 MRPS17Q9Y2R5 130 aaKnown RBP23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 ADGRG1Q9Y653 693 aa23.18■■□□□ 1.3
R3HDM4-205ENST00000589445 A0A0A6YYK5 440 aaPredicted RBP23.17■■□□□ 1.3
R3HDM4-205ENST00000589445 A0A0U1RQJ8 604 aa23.17■■□□□ 1.3
R3HDM4-205ENST00000589445 MACROD2A1Z1Q3 448 aa23.17■■□□□ 1.3
R3HDM4-205ENST00000589445 GFRA2O00451 464 aa23.17■■□□□ 1.3
R3HDM4-205ENST00000589445 CCDC175P0C221 793 aa23.17■■□□□ 1.3
R3HDM4-205ENST00000589445 MAN1A1P33908 653 aa23.17■■□□□ 1.3
R3HDM4-205ENST00000589445 PCK1P35558 622 aa23.17■■□□□ 1.3
R3HDM4-205ENST00000589445 DGKGP49619 791 aa23.17■■□□□ 1.3
R3HDM4-205ENST00000589445 RWDD4Q6NW29 188 aaKnown RBP23.17■■□□□ 1.3
R3HDM4-205ENST00000589445 MFN1Q8IWA4 741 aa23.17■■□□□ 1.3
R3HDM4-205ENST00000589445 ETFBKMTQ8IXQ9 262 aa23.17■■□□□ 1.3
R3HDM4-205ENST00000589445 PYROXD2Q8N2H3 581 aa23.17■■□□□ 1.3
R3HDM4-205ENST00000589445 ATRIPQ8WXE1 791 aa23.17■■□□□ 1.3
R3HDM4-205ENST00000589445 HSPH1Q92598 858 aa23.17■■□□□ 1.3
R3HDM4-205ENST00000589445 IGSF8Q969P0 613 aa23.17■■□□□ 1.3
R3HDM4-205ENST00000589445 A0A1B0GVM2 712 aa23.16■■□□□ 1.3
R3HDM4-205ENST00000589445 KANSL1LA0AUZ9 987 aa23.16■■□□□ 1.3
R3HDM4-205ENST00000589445 TCAF2A6NFQ2 919 aa23.16■■□□□ 1.3
R3HDM4-205ENST00000589445 TRIM24O15164 1050 aa23.16■■□□□ 1.3
R3HDM4-205ENST00000589445 SPOPO43791 374 aa23.16■■□□□ 1.3
R3HDM4-205ENST00000589445 CREB3O43889 395 aa23.16■■□□□ 1.3
R3HDM4-205ENST00000589445 TARSP26639 723 aaKnown RBP23.16■■□□□ 1.3
R3HDM4-205ENST00000589445 MLLT6P55198 1093 aaPredicted RBP23.16■■□□□ 1.3
R3HDM4-205ENST00000589445 STARD6P59095 220 aa23.16■■□□□ 1.3
R3HDM4-205ENST00000589445 GRSF1Q12849 480 aaKnown RBP eCLIP23.16■■□□□ 1.3
R3HDM4-205ENST00000589445 HADHQ16836 314 aaKnown RBP23.16■■□□□ 1.3
R3HDM4-205ENST00000589445 KCNT1Q5JUK3 1230 aa23.16■■□□□ 1.3
R3HDM4-205ENST00000589445 ZFYVE27Q5T4F4 411 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms