RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 MPPE1Q53F39 396 aa17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 PPP6R3Q5H9R7 873 aaPredicted RBP17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 MANEALQ5VSG8 457 aa17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 RAP1GAP2Q684P5 730 aa17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 PARM1Q6UWI2 310 aa17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 CPNE8Q86YQ8 564 aa17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 KRT35Q92764 455 aa17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 FGF14Q92915 247 aa17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 C16orf45Q96MC5 204 aaPredicted RBP17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 RPRD1AQ96P16 312 aaPredicted RBP17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 KXD1Q9BQD3 176 aa17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 TLR10Q9BXR5 811 aa17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 PCDH18Q9HCL0 1135 aa17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 ANLNQ9NQW6 1124 aa17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 ESPNB1AK53 854 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 LOC730098B7Z3J9 87 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 I6L893 689 aaPredicted RBP17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 EEF2KO00418 725 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 CES2O00748 559 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 DDX3YO15523 660 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 CREB3O43889 395 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 LRIG2O94898 1065 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 PRLRP16471 622 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 TCP1P17987 556 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 KDELR1P24390 212 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 CASQ1P31415 396 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 PTPN7P35236 360 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 ARSEP51690 589 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 NR1H3Q13133 447 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 TFDP3Q5H9I0 405 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 SEL1L2Q5TEA6 688 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 TXNRD3NBQ6F5E7 133 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 NADSYN1Q6IA69 706 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 CHST9Q7L1S5 443 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 CCDC50Q8IVM0 306 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 CCDC117Q8IWD4 279 aaPredicted RBP17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 CPA6Q8N4T0 437 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 IRF7Q92985 503 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 RSPRY1Q96DX4 576 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 PBKQ96KB5 322 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 KCTD15Q96SI1 283 aaPredicted RBP17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 CALN1Q9BXU9 219 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 ZYG11BQ9C0D3 744 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 GPATCH2LQ9NWQ4 482 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 MARK1Q9P0L2 795 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 XPO7Q9UIA9 1087 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 VANGL2Q9ULK5 521 aa17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 PACSIN2Q9UNF0 486 aaPredicted RBP17.51■□□□□ 0.39
SCAMP4-211ENST00000588907 A0A1B0GVM2 712 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 TCAF2A6NFQ2 919 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 DRGXA6NNA5 263 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 GFRA2O00451 464 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 KCNK3O14649 394 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 DAPK3O43293 454 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 ZNF500O60304 480 aaPredicted RBP17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 CLDN11O75508 207 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 IL9P15248 144 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 ZFXP17010 805 aaPredicted RBP17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 RHOQP17081 205 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 SP100P23497 879 aaPredicted RBP17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 EPHB2P29323 1055 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 OXCT1P55809 520 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 TFDP2Q14188 446 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 DPYSL3Q14195 570 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 TAZQ16635 292 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 CA9Q16790 459 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 EML3Q32P44 896 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 FBXL22Q6P050 247 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 RFX8Q6ZV50 586 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 ZNF683Q8IZ20 524 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 LGI2Q8N0V4 545 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 RIN3Q8TB24 985 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 RAPGEF5Q92565 580 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 TSC1Q92574 1164 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 ALG3Q92685 438 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 WBP2Q969T9 261 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 FAF2Q96CS3 445 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 TMA16Q96EY4 203 aaKnown RBP17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 LRRC3BQ96PB8 259 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 CSPG4P5Q96PW8 444 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 WDR24Q96S15 920 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 FAM83CQ9BQN1 747 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 MAK16Q9BXY0 300 aaKnown RBP17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 TRPV5Q9NQA5 729 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 SPHK2Q9NRA0 654 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 DNAI1Q9UI46 699 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 SNX12Q9UMY4 172 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 WNT6Q9Y6F9 365 aa17.5■□□□□ 0.39
SCAMP4-211ENST00000588907 SRGAP2O75044 1071 aa17.49■□□□□ 0.39
SCAMP4-211ENST00000588907 SLC6A4P31645 630 aa17.49■□□□□ 0.39
SCAMP4-211ENST00000588907 SERPINB6P35237 376 aa17.49■□□□□ 0.39
SCAMP4-211ENST00000588907 MARCKSL1P49006 195 aa17.49■□□□□ 0.39
SCAMP4-211ENST00000588907 MAPKAPK2P49137 400 aa17.49■□□□□ 0.39
SCAMP4-211ENST00000588907 CDH4P55283 916 aa17.49■□□□□ 0.39
SCAMP4-211ENST00000588907 AMPD2Q01433 879 aa17.49■□□□□ 0.39
SCAMP4-211ENST00000588907 ATP13A4Q4VNC1 1196 aa17.49■□□□□ 0.39
SCAMP4-211ENST00000588907 PAPD7Q5XG87 772 aaKnown RBP17.49■□□□□ 0.39
SCAMP4-211ENST00000588907 RWDD4Q6NW29 188 aaKnown RBP17.49■□□□□ 0.39
SCAMP4-211ENST00000588907 SYT10Q6XYQ8 523 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms