RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 KCNV2Q8TDN2 545 aa18.08■□□□□ 0.48
ERCC2-211ENST00000588652 PTCD3Q96EY7 689 aaKnown RBP18.08■□□□□ 0.48
ERCC2-211ENST00000588652 SRPK1Q96SB4 655 aaKnown RBP18.08■□□□□ 0.48
ERCC2-211ENST00000588652 TUBB6Q9BUF5 446 aa18.08■□□□□ 0.48
ERCC2-211ENST00000588652 ARL8BQ9NVJ2 186 aa18.08■□□□□ 0.48
ERCC2-211ENST00000588652 ZNF180Q9UJW8 692 aa18.08■□□□□ 0.48
ERCC2-211ENST00000588652 CDH9Q9ULB4 789 aa18.08■□□□□ 0.48
ERCC2-211ENST00000588652 COPEO14579 308 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 CA12O43570 354 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 CREB3O43889 395 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 DNAJC6O75061 913 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 ADAMTS4O75173 837 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 KRT37O76014 449 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 DLDP09622 509 aaKnown RBP18.07■□□□□ 0.48
ERCC2-211ENST00000588652 CALB2P22676 271 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 PRKCHP24723 683 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 RPL9P32969 192 aaKnown RBP18.07■□□□□ 0.48
ERCC2-211ENST00000588652 FLT3LGP49771 235 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 FCGRTP55899 365 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 NKX3-2P78367 333 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 CDK16Q00536 496 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 TRIM32Q13049 653 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 TIGD5Q53EQ6 642 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 RAB41Q5JT25 222 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 WASHC2DQ5SRD0 308 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 SIGLEC10Q96LC7 697 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 CNGB3Q9NQW8 809 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 SMYD2Q9NRG4 433 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 PADI3Q9ULW8 664 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 MTO1Q9Y2Z2 717 aaKnown RBP18.07■□□□□ 0.48
ERCC2-211ENST00000588652 A0A0A0MRY4 1105 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 TRDMT1O14717 391 aaKnown RBP18.07■□□□□ 0.48
ERCC2-211ENST00000588652 CAPN9O14815 690 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 ASGR1P07306 291 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 CD52P31358 61 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 THPOP40225 353 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 NETO2Q8NC67 525 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 SLC7A14Q8TBB6 771 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 PRR11Q96HE9 360 aaPredicted RBP18.07■□□□□ 0.48
ERCC2-211ENST00000588652 SPATA13Q96N96 652 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 ZIC5Q96T25 663 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 SLC9A7Q96T83 725 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 PTCH2Q9Y6C5 1203 aa18.07■□□□□ 0.48
ERCC2-211ENST00000588652 SF3B1O75533 1304 aaKnown RBP eCLIP18.06■□□□□ 0.487e-8■■■■■ 131
ERCC2-211ENST00000588652 KLF11O14901 512 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 MGEA5O60502 916 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 ZNF623O75123 536 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 SNRPAP09012 282 aaKnown RBP18.06■□□□□ 0.48
ERCC2-211ENST00000588652 SERPINB3P29508 390 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 GRIA1P42261 906 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 DENND5BQ6ZUT9 1274 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 ENDOVQ8N8Q3 282 aaKnown RBP18.06■□□□□ 0.48
ERCC2-211ENST00000588652 ADAM32Q8TC27 787 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 DENND2DQ9H6A0 471 aaPredicted RBP18.06■□□□□ 0.48
ERCC2-211ENST00000588652 WDR6Q9NNW5 1121 aaKnown RBP18.06■□□□□ 0.48
ERCC2-211ENST00000588652 FBXO6Q9NRD1 293 aaPredicted RBP18.06■□□□□ 0.48
ERCC2-211ENST00000588652 RPL26L1Q9UNX3 145 aaKnown RBP18.06■□□□□ 0.48
ERCC2-211ENST00000588652 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.06■□□□□ 0.48
ERCC2-211ENST00000588652 TDRD15B5MCY1 1934 aaKnown RBP18.06■□□□□ 0.48
ERCC2-211ENST00000588652 BRCA2P51587 3418 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 C9IYK1 514 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 APOEP02649 317 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 RPLP2P05387 115 aaKnown RBP18.06■□□□□ 0.48
ERCC2-211ENST00000588652 USP17L7P0C7H9 530 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 TPBGLP0DKB5 382 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 ADRA1BP35368 520 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 CCNFP41002 786 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 DPYSQ14117 519 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 UNC5AQ6ZN44 842 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 CTU1Q7Z7A3 348 aaKnown RBP18.06■□□□□ 0.48
ERCC2-211ENST00000588652 MPP5Q8N3R9 675 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 TTC8Q8TAM2 541 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 NUDCD1Q96RS6 583 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 EBNA1BP2Q99848 306 aaKnown RBP18.06■□□□□ 0.48
ERCC2-211ENST00000588652 CADM1Q9BY67 442 aaKnown RBP18.06■□□□□ 0.48
ERCC2-211ENST00000588652 XAB2Q9HCS7 855 aaKnown RBP18.06■□□□□ 0.48
ERCC2-211ENST00000588652 XPNPEP3Q9NQH7 507 aa18.06■□□□□ 0.48
ERCC2-211ENST00000588652 HHLA1C9JL84 531 aa18.05■□□□□ 0.48
ERCC2-211ENST00000588652 EEF2KO00418 725 aaKnown RBP18.05■□□□□ 0.48
ERCC2-211ENST00000588652 UGT1A9O60656 530 aa18.05■□□□□ 0.48
ERCC2-211ENST00000588652 GSTA2P09210 222 aa18.05■□□□□ 0.48
ERCC2-211ENST00000588652 PCSK1P29120 753 aa18.05■□□□□ 0.48
ERCC2-211ENST00000588652 ZBTB16Q05516 673 aa18.05■□□□□ 0.48
ERCC2-211ENST00000588652 CRYMQ14894 314 aa18.05■□□□□ 0.48
ERCC2-211ENST00000588652 NAA25Q14CX7 972 aa18.05■□□□□ 0.48
ERCC2-211ENST00000588652 PAFAH1B3Q15102 231 aaKnown RBP18.05■□□□□ 0.48
ERCC2-211ENST00000588652 RFX8Q6ZV50 586 aa18.05■□□□□ 0.48
ERCC2-211ENST00000588652 KIRREL3Q8IZU9 778 aa18.05■□□□□ 0.48
ERCC2-211ENST00000588652 P2RY11Q96G91 374 aa18.05■□□□□ 0.48
ERCC2-211ENST00000588652 SMARCD1Q96GM5 515 aa18.05■□□□□ 0.48
ERCC2-211ENST00000588652 RTP3Q9BQQ7 232 aa18.05■□□□□ 0.48
ERCC2-211ENST00000588652 TRIM56Q9BRZ2 755 aaKnown RBP18.05■□□□□ 0.48
ERCC2-211ENST00000588652 UGT1A7Q9HAW7 530 aa18.05■□□□□ 0.48
ERCC2-211ENST00000588652 UGT1A10Q9HAW8 530 aa18.05■□□□□ 0.48
ERCC2-211ENST00000588652 UGT1A8Q9HAW9 530 aa18.05■□□□□ 0.48
ERCC2-211ENST00000588652 ANLNQ9NQW6 1124 aa18.05■□□□□ 0.48
ERCC2-211ENST00000588652 MAD1L1Q9Y6D9 718 aa18.05■□□□□ 0.48
ERCC2-211ENST00000588652 C2orf71A6NGG8 1288 aa18.04■□□□□ 0.48
ERCC2-211ENST00000588652 FAM72CH0Y354 149 aa18.04■□□□□ 0.48
ERCC2-211ENST00000588652 I3L4J1 428 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms