RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 ZFP37Q9Y6Q3 630 aaPredicted RBP23.38■■□□□ 1.33
ACTN4-210ENST00000588618 hCG_1818297A0A087WSY0 165 aa23.37■■□□□ 1.33
ACTN4-210ENST00000588618 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.37■■□□□ 1.33
ACTN4-210ENST00000588618 F5H5T6 163 aa23.37■■□□□ 1.33
ACTN4-210ENST00000588618 SMAD4Q13485 552 aaKnown RBP23.37■■□□□ 1.33
ACTN4-210ENST00000588618 FAM78AQ5JUQ0 283 aa23.37■■□□□ 1.33
ACTN4-210ENST00000588618 ADGRF1Q5T601 910 aa23.37■■□□□ 1.33
ACTN4-210ENST00000588618 KAZNQ674X7 775 aa23.37■■□□□ 1.33
ACTN4-210ENST00000588618 RAP1GAP2Q684P5 730 aa23.37■■□□□ 1.33
ACTN4-210ENST00000588618 NADSYN1Q6IA69 706 aa23.37■■□□□ 1.33
ACTN4-210ENST00000588618 RWDD4Q6NW29 188 aaKnown RBP23.37■■□□□ 1.33
ACTN4-210ENST00000588618 HTR3DQ70Z44 454 aa23.37■■□□□ 1.33
ACTN4-210ENST00000588618 NAP1L3Q99457 506 aaPredicted RBP23.37■■□□□ 1.33
ACTN4-210ENST00000588618 HEMGNQ9BXL5 484 aa23.37■■□□□ 1.33
ACTN4-210ENST00000588618 OSBPL8Q9BZF1 889 aa23.37■■□□□ 1.33
ACTN4-210ENST00000588618 L2HGDHQ9H9P8 463 aa23.37■■□□□ 1.33
ACTN4-210ENST00000588618 CWC15Q9P013 229 aaKnown RBP23.37■■□□□ 1.33
ACTN4-210ENST00000588618 VANGL2Q9ULK5 521 aa23.37■■□□□ 1.33
ACTN4-210ENST00000588618 NEU3Q9UQ49 428 aa23.37■■□□□ 1.33
ACTN4-210ENST00000588618 E2F8A0AVK6 867 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 GOT1P17174 413 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 PAFAH1B1P43034 410 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 AUHQ13825 339 aaKnown RBP23.36■■□□□ 1.33
ACTN4-210ENST00000588618 TUBB2AQ13885 445 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 PPP2R5EQ16537 467 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 OTOP3Q7RTS5 596 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 C14orf80Q86SX3 495 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 TUBB2BQ9BVA1 445 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 COL6A3P12111 3177 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 E9PAM4 449 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 LRIG2O94898 1065 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 FGGP02679 453 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 EPHB2P29323 1055 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 HTR7P34969 479 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 MANEALQ5VSG8 457 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 SLC13A5Q86YT5 568 aaPredicted RBP23.36■■□□□ 1.33
ACTN4-210ENST00000588618 RFX6Q8HWS3 928 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 ACTRT1Q8TDG2 376 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 SUSD6Q92537 303 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 FAF2Q96CS3 445 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 MYEOVQ96EZ4 313 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 CSPG4P5Q96PW8 444 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 PRMT1Q99873 361 aaKnown RBP23.36■■□□□ 1.33
ACTN4-210ENST00000588618 ZFP14Q9HCL3 533 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 RNF14Q9UBS8 474 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 TTC7AQ9ULT0 858 aaPredicted RBP23.36■■□□□ 1.33
ACTN4-210ENST00000588618 NR2E1Q9Y466 385 aa23.36■■□□□ 1.33
ACTN4-210ENST00000588618 GOLGA6L7A0A1B0GV03 622 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 TYW5A2RUC4 315 aaKnown RBP23.35■■□□□ 1.33
ACTN4-210ENST00000588618 ZNF487B1APH4 448 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 TJP3O95049 919 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 TCF3P15923 654 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 TACR2P21452 398 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 PTPN7P35236 360 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 CHKAP35790 457 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 NRG1Q02297 640 aaPredicted RBP23.35■■□□□ 1.33
ACTN4-210ENST00000588618 KLF1Q13351 362 aaPredicted RBP23.35■■□□□ 1.33
ACTN4-210ENST00000588618 TFDP2Q14188 446 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 ZNF77Q15935 545 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 LONRF2Q1L5Z9 754 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 FAM133BQ5BKY9 247 aaKnown RBP23.35■■□□□ 1.33
ACTN4-210ENST00000588618 ANKRD20A8PQ5CZ79 823 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 RABGAP1LQ5R372 815 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 Q6ZNB5 142 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 RFX8Q6ZV50 586 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 ADAT2Q7Z6V5 191 aaKnown RBP23.35■■□□□ 1.33
ACTN4-210ENST00000588618 ZNF683Q8IZ20 524 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 PCDH19Q8TAB3 1148 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 E2F7Q96AV8 911 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 TBC1D31Q96DN5 1066 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 RPRD1AQ96P16 312 aaPredicted RBP23.35■■□□□ 1.33
ACTN4-210ENST00000588618 MYADMQ96S97 322 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 TBC1D14Q9P2M4 693 aa23.35■■□□□ 1.33
ACTN4-210ENST00000588618 PGRMC1O00264 195 aaKnown RBP23.34■■□□□ 1.33
ACTN4-210ENST00000588618 LAMP2P13473 410 aa23.34■■□□□ 1.33
ACTN4-210ENST00000588618 USP4Q13107 963 aa23.34■■□□□ 1.33
ACTN4-210ENST00000588618 SIX1Q15475 284 aaPredicted RBP23.34■■□□□ 1.33
ACTN4-210ENST00000588618 BBS7Q8IWZ6 715 aa23.34■■□□□ 1.33
ACTN4-210ENST00000588618 LGI2Q8N0V4 545 aa23.34■■□□□ 1.33
ACTN4-210ENST00000588618 PQLC3Q8N755 202 aa23.34■■□□□ 1.33
ACTN4-210ENST00000588618 CATSPERBQ9H7T0 1116 aa23.34■■□□□ 1.33
ACTN4-210ENST00000588618 STOML2Q9UJZ1 356 aa23.34■■□□□ 1.33
ACTN4-210ENST00000588618 MFHAS1Q9Y4C4 1052 aa23.34■■□□□ 1.33
ACTN4-210ENST00000588618 SLC9A3R1O14745 358 aaPredicted RBP23.33■■□□□ 1.33
ACTN4-210ENST00000588618 SLC6A4P31645 630 aa23.33■■□□□ 1.33
ACTN4-210ENST00000588618 VIPR2P41587 438 aa23.33■■□□□ 1.33
ACTN4-210ENST00000588618 HCAR3P49019 387 aa23.33■■□□□ 1.33
ACTN4-210ENST00000588618 IRAK1P51617 712 aa23.33■■□□□ 1.33
ACTN4-210ENST00000588618 FBXL22Q6P050 247 aa23.33■■□□□ 1.33
ACTN4-210ENST00000588618 RNF157Q96PX1 679 aa23.33■■□□□ 1.33
ACTN4-210ENST00000588618 TRPV4Q9HBA0 871 aa23.33■■□□□ 1.33
ACTN4-210ENST00000588618 ETNK2Q9NVF9 386 aa23.33■■□□□ 1.33
ACTN4-210ENST00000588618 OBP2AQ9NY56 170 aa23.33■■□□□ 1.33
ACTN4-210ENST00000588618 EFR3BQ9Y2G0 817 aa23.33■■□□□ 1.33
ACTN4-210ENST00000588618 NUP205Q92621 2012 aa23.33■■□□□ 1.33
ACTN4-210ENST00000588618 FGF10O15520 208 aaPredicted RBP23.33■■□□□ 1.32
ACTN4-210ENST00000588618 MBTPS2O43462 519 aa23.33■■□□□ 1.32
ACTN4-210ENST00000588618 SP100P23497 879 aaPredicted RBP23.33■■□□□ 1.32
ACTN4-210ENST00000588618 DYNLT1P63172 113 aa23.33■■□□□ 1.32
ACTN4-210ENST00000588618 WHAMMP3Q1A5X7 153 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms