RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 KIAA1549LQ6ZVL6 1849 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 KHNYNO15037 678 aaKnown RBP20.26■□□□□ 0.83
TPM4-208ENST00000588410 NDUFS2O75306 463 aa20.26■□□□□ 0.83
TPM4-208ENST00000588410 TACR2P21452 398 aa20.26■□□□□ 0.83
TPM4-208ENST00000588410 PRKCHP24723 683 aa20.26■□□□□ 0.83
TPM4-208ENST00000588410 CD70P32970 193 aa20.26■□□□□ 0.83
TPM4-208ENST00000588410 COPB1P53618 953 aaKnown RBP20.26■□□□□ 0.83
TPM4-208ENST00000588410 POLR2FP61218 127 aaKnown RBP20.26■□□□□ 0.83
TPM4-208ENST00000588410 PITX1P78337 314 aaPredicted RBP20.26■□□□□ 0.83
TPM4-208ENST00000588410 TCEAL6Q6IPX3 200 aa20.26■□□□□ 0.83
TPM4-208ENST00000588410 SLC26A9Q7LBE3 791 aa20.26■□□□□ 0.83
TPM4-208ENST00000588410 ADIPOR2Q86V24 386 aa20.26■□□□□ 0.83
TPM4-208ENST00000588410 ERICH1Q86X53 443 aa20.26■□□□□ 0.83
TPM4-208ENST00000588410 CFAP52Q8N1V2 620 aa20.26■□□□□ 0.83
TPM4-208ENST00000588410 FIBINQ8TAL6 211 aa20.26■□□□□ 0.83
TPM4-208ENST00000588410 TCEAL3Q969E4 200 aa20.26■□□□□ 0.83
TPM4-208ENST00000588410 NAT10Q9H0A0 1025 aaKnown RBP20.26■□□□□ 0.83
TPM4-208ENST00000588410 XPO7Q9UIA9 1087 aaKnown RBP20.26■□□□□ 0.83
TPM4-208ENST00000588410 DAAM1Q9Y4D1 1078 aa20.26■□□□□ 0.83
TPM4-208ENST00000588410 MYOFQ9NZM1 2061 aa20.26■□□□□ 0.83
TPM4-208ENST00000588410 IGHV1OR15-9A0A0B4J2B8 117 aa20.25■□□□□ 0.83
TPM4-208ENST00000588410 DCDC2BA2VCK2 349 aa20.25■□□□□ 0.83
TPM4-208ENST00000588410 KCNU1A8MYU2 1149 aa20.25■□□□□ 0.83
TPM4-208ENST00000588410 F5H5T6 163 aa20.25■□□□□ 0.83
TPM4-208ENST00000588410 H0Y626 953 aa20.25■□□□□ 0.83
TPM4-208ENST00000588410 DAB1O75553 588 aa20.25■□□□□ 0.83
TPM4-208ENST00000588410 LSM8O95777 96 aaKnown RBP20.25■□□□□ 0.83
TPM4-208ENST00000588410 DLDP09622 509 aaKnown RBP20.25■□□□□ 0.83
TPM4-208ENST00000588410 ACADMP11310 421 aa20.25■□□□□ 0.83
TPM4-208ENST00000588410 CDH5P33151 784 aaPredicted RBP20.25■□□□□ 0.83
TPM4-208ENST00000588410 PTGER3P43115 390 aa20.25■□□□□ 0.83
TPM4-208ENST00000588410 KLK7P49862 253 aa20.25■□□□□ 0.83
TPM4-208ENST00000588410 NME3Q13232 169 aa20.25■□□□□ 0.83
TPM4-208ENST00000588410 MTA1Q13330 715 aa20.25■□□□□ 0.83
TPM4-208ENST00000588410 RNF43Q68DV7 783 aa20.25■□□□□ 0.83
TPM4-208ENST00000588410 KIAA0907Q7Z7F0 614 aaPredicted RBP20.25■□□□□ 0.83
TPM4-208ENST00000588410 NOP9Q86U38 636 aaKnown RBP20.25■□□□□ 0.83
TPM4-208ENST00000588410 TMPRSS6Q8IU80 811 aa20.25■□□□□ 0.83
TPM4-208ENST00000588410 DEFB119Q8N690 84 aa20.25■□□□□ 0.83
TPM4-208ENST00000588410 ZNF397Q8NF99 534 aaPredicted RBP20.25■□□□□ 0.83
TPM4-208ENST00000588410 WFDC5Q8TCV5 224 aa20.25■□□□□ 0.83
TPM4-208ENST00000588410 PRCCQ92733 491 aaPredicted RBP20.25■□□□□ 0.83
TPM4-208ENST00000588410 C18orf8Q96DM3 657 aa20.25■□□□□ 0.83
TPM4-208ENST00000588410 SIPA1Q96FS4 1042 aa20.25■□□□□ 0.83
TPM4-208ENST00000588410 SPAG5Q96R06 1193 aa20.25■□□□□ 0.83
TPM4-208ENST00000588410 GANQ9H2C0 597 aa20.25■□□□□ 0.83
TPM4-208ENST00000588410 LIMA1Q9UHB6 759 aaKnown RBP20.25■□□□□ 0.83
TPM4-208ENST00000588410 GFPT2O94808 682 aa20.24■□□□□ 0.83
TPM4-208ENST00000588410 MOCS3O95396 460 aa20.24■□□□□ 0.83
TPM4-208ENST00000588410 HLA-EP13747 358 aa20.24■□□□□ 0.83
TPM4-208ENST00000588410 NOS2P35228 1153 aa20.24■□□□□ 0.83
TPM4-208ENST00000588410 LIMK1P53667 647 aa20.24■□□□□ 0.83
TPM4-208ENST00000588410 RNASE9P60153 205 aaKnown RBP20.24■□□□□ 0.83
TPM4-208ENST00000588410 ST8SIA6P61647 398 aa20.24■□□□□ 0.83
TPM4-208ENST00000588410 TYRO3Q06418 890 aa20.24■□□□□ 0.83
TPM4-208ENST00000588410 LMAN2Q12907 356 aa20.24■□□□□ 0.83
TPM4-208ENST00000588410 METTL3Q86U44 580 aaKnown RBP20.24■□□□□ 0.83
TPM4-208ENST00000588410 SYT12Q8IV01 421 aa20.24■□□□□ 0.83
TPM4-208ENST00000588410 MYEOVQ96EZ4 313 aa20.24■□□□□ 0.83
TPM4-208ENST00000588410 EDEM2Q9BV94 578 aa20.24■□□□□ 0.83
TPM4-208ENST00000588410 MKRN2Q9H000 416 aaKnown RBP20.24■□□□□ 0.83
TPM4-208ENST00000588410 NLRC4Q9NPP4 1024 aa20.24■□□□□ 0.83
TPM4-208ENST00000588410 RRN3Q9NYV6 651 aa20.24■□□□□ 0.83
TPM4-208ENST00000588410 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.24■□□□□ 0.837e-11■■■■■ 26.8
TPM4-208ENST00000588410 STAP1Q9ULZ2 295 aa20.24■□□□□ 0.83
TPM4-208ENST00000588410 FRYLO94915 3013 aa20.24■□□□□ 0.83
TPM4-208ENST00000588410 LGALS16A8MUM7 142 aa20.23■□□□□ 0.83
TPM4-208ENST00000588410 M0QYT0 321 aa20.23■□□□□ 0.83
TPM4-208ENST00000588410 LUC7L3O95232 432 aaKnown RBP20.23■□□□□ 0.83
TPM4-208ENST00000588410 MMEP08473 750 aa20.23■□□□□ 0.83
TPM4-208ENST00000588410 CD6P30203 668 aa20.23■□□□□ 0.83
TPM4-208ENST00000588410 SOX5P35711 763 aa20.23■□□□□ 0.83
TPM4-208ENST00000588410 STAT1P42224 750 aa20.23■□□□□ 0.83
TPM4-208ENST00000588410 MATKP42679 507 aa20.23■□□□□ 0.83
TPM4-208ENST00000588410 UBXN1Q04323 297 aa20.23■□□□□ 0.83
TPM4-208ENST00000588410 EIF4EBP2Q13542 120 aaPredicted RBP20.23■□□□□ 0.83
TPM4-208ENST00000588410 SYCP1Q15431 976 aa20.23■□□□□ 0.83
TPM4-208ENST00000588410 RABGAP1LQ5R372 815 aa20.23■□□□□ 0.83
TPM4-208ENST00000588410 FAM102AQ5T9C2 384 aaPredicted RBP20.23■□□□□ 0.83
TPM4-208ENST00000588410 STPG1Q5TH74 334 aa20.23■□□□□ 0.83
TPM4-208ENST00000588410 SND1Q7KZF4 910 aaKnown RBP eCLIP20.23■□□□□ 0.83
TPM4-208ENST00000588410 ZNF677Q86XU0 584 aa20.23■□□□□ 0.83
TPM4-208ENST00000588410 NEK11Q8NG66 645 aa20.23■□□□□ 0.83
TPM4-208ENST00000588410 EPS8L1Q8TE68 723 aa20.23■□□□□ 0.83
TPM4-208ENST00000588410 DDX1Q92499 740 aaKnown RBP20.23■□□□□ 0.83
TPM4-208ENST00000588410 RXFP3Q9NSD7 469 aa20.23■□□□□ 0.83
TPM4-208ENST00000588410 TMEM63CQ9P1W3 806 aa20.23■□□□□ 0.83
TPM4-208ENST00000588410 KIAA1522Q9P206 1035 aaPredicted RBP20.23■□□□□ 0.83
TPM4-208ENST00000588410 SUN2Q9UH99 717 aa20.23■□□□□ 0.83
TPM4-208ENST00000588410 FAM170AA1A519 330 aa20.22■□□□□ 0.83
TPM4-208ENST00000588410 ASLP04424 464 aa20.22■□□□□ 0.83
TPM4-208ENST00000588410 OXTRP30559 389 aa20.22■□□□□ 0.83
TPM4-208ENST00000588410 SCNN1AP37088 669 aa20.22■□□□□ 0.83
TPM4-208ENST00000588410 CSKP41240 450 aa20.22■□□□□ 0.83
TPM4-208ENST00000588410 GABRB2P47870 512 aa20.22■□□□□ 0.83
TPM4-208ENST00000588410 ZNF33AQ06730 810 aa20.22■□□□□ 0.83
TPM4-208ENST00000588410 PTPRNQ16849 979 aa20.22■□□□□ 0.83
TPM4-208ENST00000588410 TTC39BQ5VTQ0 682 aaPredicted RBP20.22■□□□□ 0.83
TPM4-208ENST00000588410 NAA35Q5VZE5 725 aa20.22■□□□□ 0.83
TPM4-208ENST00000588410 CACUL1Q86Y37 369 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms