RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 PNKPQ96T60 521 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 P2RY13Q9BPV8 354 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 COL25A1Q9BXS0 654 aaPredicted RBP9.37□□□□□ -0.91
CIRBP-218ENST00000588344 ADAM33Q9BZ11 813 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 SIK2Q9H0K1 926 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 MFSD1Q9H3U5 465 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 OSGEPQ9NPF4 335 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 FBXO10Q9UK96 956 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 FZD10Q9ULW2 581 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 SLC27A6Q9Y2P4 619 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.37□□□□□ -0.91
CIRBP-218ENST00000588344 PATJQ8NI35 1801 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 GREB1Q4ZG55 1949 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 IGLV3-10A0A075B6K4 115 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.36□□□□□ -0.91
CIRBP-218ENST00000588344 GOLGA6L7A0A1B0GV03 622 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 A0A1B0GVM2 712 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 KRBA1A5PL33 1030 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 TCAF2A6NFQ2 919 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 TMEM221A6NGB7 291 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 OTOL1A6NHN0 477 aaPredicted RBP9.36□□□□□ -0.91
CIRBP-218ENST00000588344 E9PAM4 449 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 H0Y626 953 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 M0R296 226 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 STK25O00506 426 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 SCAMP3O14828 347 aaKnown RBP9.36□□□□□ -0.91
CIRBP-218ENST00000588344 NPC1O15118 1278 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 ZSCAN12O43309 604 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 TSPAN3O60637 253 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 TBL1XO60907 577 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 APODP05090 189 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 SLC6A4P31645 630 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 SSR1P43307 286 aaKnown RBP9.36□□□□□ -0.91
CIRBP-218ENST00000588344 TNFRSF4P43489 277 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 DGKGP49619 791 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 GALK1P51570 392 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 ATXN1P54253 815 aaKnown RBP9.36□□□□□ -0.91
CIRBP-218ENST00000588344 CDH4P55283 916 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 ZNF252P-AS1Q0IIN9 211 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 ZNF177Q13360 481 aaPredicted RBP9.36□□□□□ -0.91
CIRBP-218ENST00000588344 LRRC32Q14392 662 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 DMC1Q14565 340 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 ODF2Q5BJF6 829 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 RNF43Q68DV7 783 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 FBXL22Q6P050 247 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 CHST9Q7L1S5 443 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 ETFBKMTQ8IXQ9 262 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 ACRBPQ8NEB7 543 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 FIBINQ8TAL6 211 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 KIAA1524Q8TCG1 905 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 EPAS1Q99814 870 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 IER2Q9BTL4 223 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 C1QTNF1Q9BXJ1 281 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 TRIM7Q9C029 511 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 ZYG11BQ9C0D3 744 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 CATSPERBQ9H7T0 1116 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 ZWILCHQ9H900 591 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 PRDM16Q9HAZ2 1276 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 DNAJC17Q9NVM6 304 aaKnown RBP9.36□□□□□ -0.91
CIRBP-218ENST00000588344 KIAA1522Q9P206 1035 aaPredicted RBP9.36□□□□□ -0.91
CIRBP-218ENST00000588344 RCOR3Q9P2K3 495 aaPredicted RBP9.36□□□□□ -0.91
CIRBP-218ENST00000588344 PCSK1NQ9UHG2 260 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 XPO7Q9UIA9 1087 aaKnown RBP9.36□□□□□ -0.91
CIRBP-218ENST00000588344 VANGL2Q9ULK5 521 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 CA14Q9ULX7 337 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 REXO2Q9Y3B8 237 aaKnown RBP9.36□□□□□ -0.91
CIRBP-218ENST00000588344 SIT1Q9Y3P8 196 aa9.36□□□□□ -0.91
CIRBP-218ENST00000588344 TBC1D3BA6NDS4 549 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 FAM170BA6NMN3 283 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 FGF10O15520 208 aaPredicted RBP9.35□□□□□ -0.91
CIRBP-218ENST00000588344 SRGAP2O75044 1071 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 TULP3O75386 442 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 MOCS3O95396 460 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 RHOQP17081 205 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 HOXD9P28356 352 aaPredicted RBP9.35□□□□□ -0.91
CIRBP-218ENST00000588344 ETFBP38117 255 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 OPRD1P41143 372 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 CDH18Q13634 790 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 EIF4HQ15056 248 aaKnown RBP9.35□□□□□ -0.91
CIRBP-218ENST00000588344 PDK2Q15119 407 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 DPYSL2Q16555 572 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 HSF5Q4G112 596 aaPredicted RBP9.35□□□□□ -0.91
CIRBP-218ENST00000588344 TMEM196Q5HYL7 178 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 C6orf118Q5T5N4 469 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 GRAMD4Q6IC98 578 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 C11orf63Q6NUN7 778 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 RFWD3Q6PCD5 774 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 ZNF783Q6ZMS7 281 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 DAAM2Q86T65 1068 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 SETD3Q86TU7 594 aaPredicted RBP9.35□□□□□ -0.91
CIRBP-218ENST00000588344 VSIG1Q86XK7 387 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 MFN1Q8IWA4 741 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 RHOT1Q8IXI2 618 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 ZNF683Q8IZ20 524 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 ARFGAP1Q8N6T3 406 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 CCDC185Q8N715 623 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.35□□□□□ -0.91
CIRBP-218ENST00000588344 TTC8Q8TAM2 541 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 WFIKKN2Q8TEU8 576 aa9.35□□□□□ -0.91
CIRBP-218ENST00000588344 TBC1D31Q96DN5 1066 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms