RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 LSM7Q9UK45 103 aaKnown RBP15.43■□□□□ 0.06
NFIX-208ENST00000587260 TJP3O95049 919 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 KLKB1P03952 638 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 FCARP24071 287 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 NRG1Q02297 640 aaPredicted RBP15.43■□□□□ 0.06
NFIX-208ENST00000587260 USP4Q13107 963 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 KRT81Q14533 505 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 ZNF77Q15935 545 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 DDX42Q86XP3 938 aaKnown RBP eCLIP15.43■□□□□ 0.06
NFIX-208ENST00000587260 UNC45BQ8IWX7 931 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 PYROXD2Q8N2H3 581 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 ATP6V0D2Q8N8Y2 350 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 C1orf74Q96LT6 269 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 KCTD15Q96SI1 283 aaPredicted RBP15.43■□□□□ 0.06
NFIX-208ENST00000587260 HERPUD2Q9BSE4 406 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 SIK2Q9H0K1 926 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 KIF9Q9HAQ2 790 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 SMARCAL1Q9NZC9 954 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 AGO1Q9UL18 857 aaKnown RBP15.43■□□□□ 0.06
NFIX-208ENST00000587260 GOLGA6L7A0A1B0GV03 622 aa15.42■□□□□ 0.06
NFIX-208ENST00000587260 CCDC188H7C350 402 aa15.42■□□□□ 0.06
NFIX-208ENST00000587260 GREM1O60565 184 aa15.42■□□□□ 0.06
NFIX-208ENST00000587260 LAMP2P13473 410 aa15.42■□□□□ 0.06
NFIX-208ENST00000587260 VCPP55072 806 aaKnown RBP15.42■□□□□ 0.06
NFIX-208ENST00000587260 TUBB4BP68371 445 aa15.42■□□□□ 0.06
NFIX-208ENST00000587260 SIX1Q15475 284 aaPredicted RBP15.42■□□□□ 0.06
NFIX-208ENST00000587260 PPP6R3Q5H9R7 873 aaPredicted RBP15.42■□□□□ 0.06
NFIX-208ENST00000587260 PIK3R6Q5UE93 754 aa15.42■□□□□ 0.06
NFIX-208ENST00000587260 RAP1GAP2Q684P5 730 aa15.42■□□□□ 0.06
NFIX-208ENST00000587260 NADSYN1Q6IA69 706 aa15.42■□□□□ 0.06
NFIX-208ENST00000587260 BBS12Q6ZW61 710 aa15.42■□□□□ 0.06
NFIX-208ENST00000587260 OTOP3Q7RTS5 596 aa15.42■□□□□ 0.06
NFIX-208ENST00000587260 CHSY1Q86X52 802 aa15.42■□□□□ 0.06
NFIX-208ENST00000587260 ZDHHC14Q8IZN3 488 aa15.42■□□□□ 0.06
NFIX-208ENST00000587260 CELF5Q8N6W0 485 aaKnown RBP15.42■□□□□ 0.06
NFIX-208ENST00000587260 TDRD5Q8NAT2 981 aaKnown RBP15.42■□□□□ 0.06
NFIX-208ENST00000587260 AZIN2Q96A70 460 aa15.42■□□□□ 0.06
NFIX-208ENST00000587260 BTN2A3PQ96KV6 586 aa15.42■□□□□ 0.06
NFIX-208ENST00000587260 RNF157Q96PX1 679 aa15.42■□□□□ 0.06
NFIX-208ENST00000587260 KXD1Q9BQD3 176 aa15.42■□□□□ 0.06
NFIX-208ENST00000587260 CALN1Q9BXU9 219 aa15.42■□□□□ 0.06
NFIX-208ENST00000587260 SLC12A6Q9UHW9 1150 aa15.42■□□□□ 0.06
NFIX-208ENST00000587260 HS3ST4Q9Y661 456 aa15.42■□□□□ 0.06
NFIX-208ENST00000587260 C2CD4DB7Z1M9 353 aa15.41■□□□□ 0.06
NFIX-208ENST00000587260 KRIT1O00522 736 aa15.41■□□□□ 0.06
NFIX-208ENST00000587260 KRT10P13645 584 aa15.41■□□□□ 0.06
NFIX-208ENST00000587260 IL9P15248 144 aa15.41■□□□□ 0.06
NFIX-208ENST00000587260 WEE1P30291 646 aa15.41■□□□□ 0.06
NFIX-208ENST00000587260 HTR7P34969 479 aa15.41■□□□□ 0.06
NFIX-208ENST00000587260 SLC11A2P49281 568 aa15.41■□□□□ 0.06
NFIX-208ENST00000587260 MLLT6P55198 1093 aaPredicted RBP15.41■□□□□ 0.06
NFIX-208ENST00000587260 TFDP2Q14188 446 aa15.41■□□□□ 0.06
NFIX-208ENST00000587260 SMAD2Q15796 467 aaKnown RBP15.41■□□□□ 0.06
NFIX-208ENST00000587260 CYP1B1Q16678 543 aa15.41■□□□□ 0.06
NFIX-208ENST00000587260 ANKRD20A8PQ5CZ79 823 aa15.41■□□□□ 0.06
NFIX-208ENST00000587260 MS4A13Q5J8X5 152 aa15.41■□□□□ 0.06
NFIX-208ENST00000587260 TANGO2Q6ICL3 276 aa15.41■□□□□ 0.06
NFIX-208ENST00000587260 PARM1Q6UWI2 310 aa15.41■□□□□ 0.06
NFIX-208ENST00000587260 BBS7Q8IWZ6 715 aa15.41■□□□□ 0.06
NFIX-208ENST00000587260 FGF14Q92915 247 aa15.41■□□□□ 0.06
NFIX-208ENST00000587260 LRRC3BQ96PB8 259 aa15.41■□□□□ 0.06
NFIX-208ENST00000587260 CWC15Q9P013 229 aaKnown RBP15.41■□□□□ 0.06
NFIX-208ENST00000587260 OR12D3Q9UGF7 316 aa15.41■□□□□ 0.06
NFIX-208ENST00000587260 TCRBV7S2A1N4TA0A589 114 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 HEPACAM2A8MVW5 462 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 EFCAB8A8MWE9 144 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 TRDMT1O14717 391 aaKnown RBP15.4■□□□□ 0.06
NFIX-208ENST00000587260 CREB3O43889 395 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 ACSL4O60488 711 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 SLC6A4P31645 630 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 ARL4AP40617 200 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 ADCY2Q08462 1091 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 MMRN1Q13201 1228 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 GRM2Q14416 872 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 ARTNQ5T4W7 220 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 SLC9A4Q6AI14 798 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 RFWD3Q6PCD5 774 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 Q6ZNB5 142 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 MMGT1Q8N4V1 131 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 PRELID2Q8N945 189 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 C12orf50Q8NA57 414 aaPredicted RBP15.4■□□□□ 0.06
NFIX-208ENST00000587260 PCDH19Q8TAB3 1148 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 BPIFB1Q8TDL5 484 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 CSPG4P5Q96PW8 444 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 PHF7Q9BWX1 381 aaPredicted RBP15.4■□□□□ 0.06
NFIX-208ENST00000587260 HEMGNQ9BXL5 484 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 MAK16Q9BXY0 300 aaKnown RBP15.4■□□□□ 0.06
NFIX-208ENST00000587260 DCLK3Q9C098 648 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 ZFP14Q9HCL3 533 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 HOMER3Q9NSC5 361 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 NR2E1Q9Y466 385 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 WNT6Q9Y6F9 365 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 ZFP37Q9Y6Q3 630 aaPredicted RBP15.4■□□□□ 0.06
NFIX-208ENST00000587260 UNC80Q8N2C7 3258 aa15.4■□□□□ 0.06
NFIX-208ENST00000587260 COL4A3Q01955 1670 aa15.39■□□□□ 0.05
NFIX-208ENST00000587260 GOLGA6L10A0A0M3HER8 536 aa15.39■□□□□ 0.05
NFIX-208ENST00000587260 E2F8A0AVK6 867 aa15.39■□□□□ 0.05
NFIX-208ENST00000587260 FAM72CH0Y354 149 aa15.39■□□□□ 0.05
NFIX-208ENST00000587260 H3BRJ5 948 aa15.39■□□□□ 0.05
NFIX-208ENST00000587260 TCF3P15923 654 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms