RNA–Protein interactions for RNA: ENST00000585630.5

CIRBP-204, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-204ENST00000585630 MED19A0JLT2 244 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-204ENST00000585630 LNP1A1A4G5 178 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 DCDC2BA2VCK2 349 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 TPM2P07951 284 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 CD70P32970 193 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 PTGER3P43115 390 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 RPS24P62847 133 aaKnown RBP17.1■□□□□ 0.33
CIRBP-204ENST00000585630 CDK17Q00537 523 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 RPL6Q02878 288 aaKnown RBP17.1■□□□□ 0.33
CIRBP-204ENST00000585630 PEAR1Q5VY43 1037 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-204ENST00000585630 IL31Q6EBC2 164 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 ARMCX6Q7L4S7 300 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 METTL3Q86U44 580 aaKnown RBP17.1■□□□□ 0.33
CIRBP-204ENST00000585630 CHSY1Q86X52 802 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 ZDHHC17Q8IUH5 632 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 DEFB106AQ8N104 65 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 TMEM35BQ8NCS4 154 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 ZNF397Q8NF99 534 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-204ENST00000585630 EPS8L1Q8TE68 723 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 DDX1Q92499 740 aaKnown RBP17.1■□□□□ 0.33
CIRBP-204ENST00000585630 LMLNQ96KR4 655 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 EDEM2Q9BV94 578 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 STK33Q9BYT3 514 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 MKRN2Q9H000 416 aaKnown RBP17.1■□□□□ 0.33
CIRBP-204ENST00000585630 TMEM245Q9H330 911 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 SYNCQ9H7C4 482 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 FANCLQ9NW38 375 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 DDIT4Q9NX09 232 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 USP36Q9P275 1121 aaKnown RBP17.1■□□□□ 0.33
CIRBP-204ENST00000585630 CYP8B1Q9UNU6 501 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 DAAM1Q9Y4D1 1078 aa17.1■□□□□ 0.33
CIRBP-204ENST00000585630 DOCK4Q8N1I0 1966 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 SYNCRIPO60506 623 aaKnown RBP17.09■□□□□ 0.33
CIRBP-204ENST00000585630 GRAP2O75791 330 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 LUC7L3O95232 432 aaKnown RBP17.09■□□□□ 0.33
CIRBP-204ENST00000585630 LSM8O95777 96 aaKnown RBP17.09■□□□□ 0.33
CIRBP-204ENST00000585630 EPHX1P07099 455 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 SLC2A3P11169 496 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 HOXD12P35452 270 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 SCNN1AP37088 669 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 DPP6P42658 865 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 COPAP53621 1224 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 SLC6A3Q01959 620 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 CAMK2GQ13555 558 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-204ENST00000585630 CDH18Q13634 790 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 PTPRNQ16849 979 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 FNDC3BQ53EP0 1204 aaKnown RBP17.09■□□□□ 0.33
CIRBP-204ENST00000585630 FKBP15Q5T1M5 1219 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 RAP1GAP2Q684P5 730 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 MBLAC2Q68D91 279 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 OR6B2Q6IFH4 312 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 NOP9Q86U38 636 aaKnown RBP17.09■□□□□ 0.33
CIRBP-204ENST00000585630 SYT12Q8IV01 421 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 ATP6V0D2Q8N8Y2 350 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 FIBINQ8TAL6 211 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 CYB5D2Q8WUJ1 264 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 PIGKQ92643 395 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 PRDM16Q9HAZ2 1276 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.09■□□□□ 0.33
CIRBP-204ENST00000585630 STIM2Q9P246 746 aa17.09■□□□□ 0.33
CIRBP-204ENST00000585630 EVLQ9UI08 416 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-204ENST00000585630 ATXN2Q99700 1313 aaKnown RBP17.08■□□□□ 0.32
CIRBP-204ENST00000585630 LGALS16A8MUM7 142 aa17.08■□□□□ 0.32
CIRBP-204ENST00000585630 KCNU1A8MYU2 1149 aa17.08■□□□□ 0.32
CIRBP-204ENST00000585630 PATE3B3GLJ2 98 aa17.08■□□□□ 0.32
CIRBP-204ENST00000585630 ATP5BP06576 529 aaKnown RBP17.08■□□□□ 0.32
CIRBP-204ENST00000585630 DLDP09622 509 aaKnown RBP17.08■□□□□ 0.32
CIRBP-204ENST00000585630 C7P10643 843 aa17.08■□□□□ 0.32
CIRBP-204ENST00000585630 TACR2P21452 398 aa17.08■□□□□ 0.32
CIRBP-204ENST00000585630 CCR1P32246 355 aa17.08■□□□□ 0.32
CIRBP-204ENST00000585630 KLK7P49862 253 aa17.08■□□□□ 0.32
CIRBP-204ENST00000585630 COPB1P53618 953 aaKnown RBP17.08■□□□□ 0.32
CIRBP-204ENST00000585630 LMAN2Q12907 356 aa17.08■□□□□ 0.32
CIRBP-204ENST00000585630 STPG1Q5TH74 334 aa17.08■□□□□ 0.32
CIRBP-204ENST00000585630 OTUD1Q5VV17 481 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-204ENST00000585630 LGI2Q8N0V4 545 aa17.08■□□□□ 0.32
CIRBP-204ENST00000585630 PRMT1Q99873 361 aaKnown RBP17.08■□□□□ 0.32
CIRBP-204ENST00000585630 PDCL3Q9H2J4 239 aa17.08■□□□□ 0.32
CIRBP-204ENST00000585630 FAM207AQ9NSI2 230 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-204ENST00000585630 LIMA1Q9UHB6 759 aaKnown RBP17.08■□□□□ 0.32
CIRBP-204ENST00000585630 NOCTQ9UK39 431 aaKnown RBP17.08■□□□□ 0.32
CIRBP-204ENST00000585630 PLA2G4CQ9UP65 541 aa17.08■□□□□ 0.32
CIRBP-204ENST00000585630 SIK3Q9Y2K2 1263 aa17.08■□□□□ 0.32
CIRBP-204ENST00000585630 NUMA1Q14980 2115 aa17.08■□□□□ 0.32
CIRBP-204ENST00000585630 TP53BP1Q12888 1972 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-204ENST00000585630 F5H5T6 163 aa17.07■□□□□ 0.32
CIRBP-204ENST00000585630 KHNYNO15037 678 aaKnown RBP17.07■□□□□ 0.32
CIRBP-204ENST00000585630 EPHB6O15197 1021 aa17.07■□□□□ 0.32
CIRBP-204ENST00000585630 IGLV3-19P01714 112 aa17.07■□□□□ 0.32
CIRBP-204ENST00000585630 HLA-EP13747 358 aa17.07■□□□□ 0.32
CIRBP-204ENST00000585630 ZNF18P17022 549 aa17.07■□□□□ 0.32
CIRBP-204ENST00000585630 POLR2EP19388 210 aaKnown RBP17.07■□□□□ 0.32
CIRBP-204ENST00000585630 ITPKAP23677 461 aa17.07■□□□□ 0.32
CIRBP-204ENST00000585630 NOS2P35228 1153 aa17.07■□□□□ 0.32
CIRBP-204ENST00000585630 GABRB2P47870 512 aa17.07■□□□□ 0.32
CIRBP-204ENST00000585630 JAM2P57087 298 aa17.07■□□□□ 0.32
CIRBP-204ENST00000585630 NOMO3P69849 1222 aa17.07■□□□□ 0.32
CIRBP-204ENST00000585630 MTA1Q13330 715 aa17.07■□□□□ 0.32
CIRBP-204ENST00000585630 TTC39BQ5VTQ0 682 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-204ENST00000585630 TAF3Q5VWG9 929 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms