RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 TCRBV7S2A1N4TA0A589 114 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 E2F8A0AVK6 867 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 DRGXA6NNA5 263 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 DCLK1O15075 740 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 PRAMEF12O95522 483 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 IRF1P10914 325 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 KRT10P13645 584 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 TPI1P60174 286 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 ADCY2Q08462 1091 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 AUHQ13825 339 aaKnown RBP16.67■□□□□ 0.26
SS18-226ENST00000585241 ZNF77Q15935 545 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 C14orf80Q86SX3 495 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 DENND1CQ8IV53 801 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 CEP112Q8N8E3 955 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 SH3RF2Q8TEC5 729 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 SUSD6Q92537 303 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 FGF13Q92913 245 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 TBC1D31Q96DN5 1066 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 NECTIN4Q96NY8 510 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 SLITRK6Q9H5Y7 841 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 TRPV4Q9HBA0 871 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 CFAP97Q9P2B7 532 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 CCL26Q9Y258 94 aa16.67■□□□□ 0.26
SS18-226ENST00000585241 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.66■□□□□ 0.26
SS18-226ENST00000585241 WASH4PA8MWX3 477 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 E9PAM4 449 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 FGF10O15520 208 aaPredicted RBP16.66■□□□□ 0.26
SS18-226ENST00000585241 CREB3O43889 395 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 CST8O60676 142 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 ZFXP17010 805 aaPredicted RBP16.66■□□□□ 0.26
SS18-226ENST00000585241 TACR2P21452 398 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 GGCXP38435 758 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 CYP1B1Q16678 543 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 ADGRF1Q5T601 910 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 RAP1GAP2Q684P5 730 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 FBXL22Q6P050 247 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 Q7L0L9 218 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 CHSY1Q86X52 802 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 RFX6Q8HWS3 928 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 ARID3BQ8IVW6 561 aaPredicted RBP16.66■□□□□ 0.26
SS18-226ENST00000585241 MICALL1Q8N3F8 863 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 CPXM2Q8N436 756 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 PLD5Q8N7P1 536 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 RIN3Q8TB24 985 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 ZSCAN18Q8TBC5 510 aaPredicted RBP16.66■□□□□ 0.26
SS18-226ENST00000585241 RPGRIP1Q96KN7 1286 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 ASB16Q96NS5 453 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 DDX50Q9BQ39 737 aaKnown RBP16.66■□□□□ 0.26
SS18-226ENST00000585241 HEMGNQ9BXL5 484 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 SIK2Q9H0K1 926 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 SMG9Q9H0W8 520 aaKnown RBP16.66■□□□□ 0.26
SS18-226ENST00000585241 RETREG1Q9H6L5 497 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 OBP2AQ9NY56 170 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 CD207Q9UJ71 328 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 CDH7Q9ULB5 785 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 SH3BP1Q9Y3L3 701 aa16.66■□□□□ 0.26
SS18-226ENST00000585241 APOC4-APOC2K7ER74 178 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 APOL1O14791 398 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 APOC2P02655 101 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 ERCC2P18074 760 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 TGM2P21980 687 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 AMPD1P23109 780 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 EPHB2P29323 1055 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 SLC6A4P31645 630 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 CBX2Q14781 532 aaPredicted RBP16.65■□□□□ 0.26
SS18-226ENST00000585241 PAFAH1B3Q15102 231 aaKnown RBP16.65■□□□□ 0.26
SS18-226ENST00000585241 LLGL1Q15334 1064 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 KAZNQ674X7 775 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 NCBP2-AS2Q69YL0 99 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 LRRC31Q6UY01 552 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 GET4Q7L5D6 327 aaPredicted RBP16.65■□□□□ 0.26
SS18-226ENST00000585241 CELF5Q8N6W0 485 aaKnown RBP16.65■□□□□ 0.26
SS18-226ENST00000585241 PRELID2Q8N945 189 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 C12orf50Q8NA57 414 aaPredicted RBP16.65■□□□□ 0.26
SS18-226ENST00000585241 TTC13Q8NBP0 860 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 MNS1Q8NEH6 495 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 SPATA4Q8NEY3 305 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 SMARCD2Q92925 531 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 MAK16Q9BXY0 300 aaKnown RBP16.65■□□□□ 0.26
SS18-226ENST00000585241 FRMD8P1Q9BZ68 369 aaPredicted RBP16.65■□□□□ 0.26
SS18-226ENST00000585241 VANGL2Q9ULK5 521 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 NR2E1Q9Y466 385 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 ZFP37Q9Y6Q3 630 aaPredicted RBP16.65■□□□□ 0.26
SS18-226ENST00000585241 DOCK4Q8N1I0 1966 aa16.65■□□□□ 0.26
SS18-226ENST00000585241 GOLGA6L7A0A1B0GV03 622 aa16.64■□□□□ 0.25
SS18-226ENST00000585241 F5H5T6 163 aa16.64■□□□□ 0.25
SS18-226ENST00000585241 CCDC188H7C350 402 aa16.64■□□□□ 0.25
SS18-226ENST00000585241 RHOQP17081 205 aa16.64■□□□□ 0.25
SS18-226ENST00000585241 FAM78AQ5JUQ0 283 aa16.64■□□□□ 0.25
SS18-226ENST00000585241 RNF43Q68DV7 783 aa16.64■□□□□ 0.25
SS18-226ENST00000585241 DRICH1Q6PGQ1 229 aaPredicted RBP16.64■□□□□ 0.25
SS18-226ENST00000585241 NLRP14Q86W24 1093 aa16.64■□□□□ 0.25
SS18-226ENST00000585241 RTL3Q8N8U3 475 aaKnown RBP16.64■□□□□ 0.25
SS18-226ENST00000585241 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.64■□□□□ 0.25
SS18-226ENST00000585241 IGSF8Q969P0 613 aa16.64■□□□□ 0.25
SS18-226ENST00000585241 MYEOVQ96EZ4 313 aa16.64■□□□□ 0.25
SS18-226ENST00000585241 PRICKLE1Q96MT3 831 aaPredicted RBP16.64■□□□□ 0.25
SS18-226ENST00000585241 CARD6Q9BX69 1037 aa16.64■□□□□ 0.25
SS18-226ENST00000585241 ZYG11BQ9C0D3 744 aa16.64■□□□□ 0.25
SS18-226ENST00000585241 POMKQ9H5K3 350 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms