RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 PMS1P54277 932 aaKnown RBP15.61■□□□□ 0.09
VAPA-209ENST00000585042 NNTQ13423 1086 aa15.61■□□□□ 0.09
VAPA-209ENST00000585042 ARID5BQ14865 1188 aa15.61■□□□□ 0.09
VAPA-209ENST00000585042 PTPRNQ16849 979 aa15.61■□□□□ 0.09
VAPA-209ENST00000585042 MBLAC2Q68D91 279 aa15.61■□□□□ 0.09
VAPA-209ENST00000585042 PMF1Q6P1K2 205 aa15.61■□□□□ 0.09
VAPA-209ENST00000585042 TMEM270Q6UE05 265 aa15.61■□□□□ 0.09
VAPA-209ENST00000585042 CCNI2Q6ZMN8 369 aaPredicted RBP15.61■□□□□ 0.09
VAPA-209ENST00000585042 BEND5Q7L4P6 421 aa15.61■□□□□ 0.09
VAPA-209ENST00000585042 FIBINQ8TAL6 211 aa15.61■□□□□ 0.09
VAPA-209ENST00000585042 TFAP2BQ92481 460 aa15.61■□□□□ 0.09
VAPA-209ENST00000585042 TTC17Q96AE7 1141 aa15.61■□□□□ 0.09
VAPA-209ENST00000585042 NT5C1BQ96P26 610 aa15.61■□□□□ 0.09
VAPA-209ENST00000585042 GDPD2Q9HCC8 539 aa15.61■□□□□ 0.09
VAPA-209ENST00000585042 PRSS16Q9NQE7 514 aa15.61■□□□□ 0.09
VAPA-209ENST00000585042 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.61■□□□□ 0.09
VAPA-209ENST00000585042 SART1O43290 800 aaKnown RBP15.6■□□□□ 0.09
VAPA-209ENST00000585042 DFNA5O60443 496 aa15.6■□□□□ 0.09
VAPA-209ENST00000585042 GABBR2O75899 941 aa15.6■□□□□ 0.09
VAPA-209ENST00000585042 SEMA4FO95754 770 aa15.6■□□□□ 0.09
VAPA-209ENST00000585042 ASLP04424 464 aa15.6■□□□□ 0.09
VAPA-209ENST00000585042 HLA-EP13747 358 aa15.6■□□□□ 0.09
VAPA-209ENST00000585042 ACSL1P33121 698 aa15.6■□□□□ 0.09
VAPA-209ENST00000585042 ANP32AP39687 249 aaKnown RBP15.6■□□□□ 0.09
VAPA-209ENST00000585042 GRIA4P48058 902 aa15.6■□□□□ 0.09
VAPA-209ENST00000585042 RPL34P49207 117 aaKnown RBP15.6■□□□□ 0.09
VAPA-209ENST00000585042 TBX4P57082 545 aa15.6■□□□□ 0.09
VAPA-209ENST00000585042 RPS14P62263 151 aaKnown RBP15.6■□□□□ 0.09
VAPA-209ENST00000585042 BNC1Q01954 994 aa15.6■□□□□ 0.09
VAPA-209ENST00000585042 LRMPQ12912 555 aa15.6■□□□□ 0.09
VAPA-209ENST00000585042 TTC31Q49AM3 519 aaPredicted RBP15.6■□□□□ 0.09
VAPA-209ENST00000585042 USP30Q70CQ3 517 aa15.6■□□□□ 0.09
VAPA-209ENST00000585042 BAHD1Q8TBE0 780 aaPredicted RBP15.6■□□□□ 0.09
VAPA-209ENST00000585042 SETD7Q8WTS6 366 aaKnown RBP15.6■□□□□ 0.09
VAPA-209ENST00000585042 CYB5D2Q8WUJ1 264 aa15.6■□□□□ 0.09
VAPA-209ENST00000585042 TRIM62Q9BVG3 475 aa15.6■□□□□ 0.09
VAPA-209ENST00000585042 NCKAP1Q9Y2A7 1128 aa15.6■□□□□ 0.09
VAPA-209ENST00000585042 PCDHB4Q9Y5E5 795 aa15.6■□□□□ 0.09
VAPA-209ENST00000585042 TYW5A2RUC4 315 aaKnown RBP15.59■□□□□ 0.09
VAPA-209ENST00000585042 RNF225M0QZC1 329 aaPredicted RBP15.59■□□□□ 0.09
VAPA-209ENST00000585042 MSI1O43347 362 aaKnown RBP15.59■□□□□ 0.09
VAPA-209ENST00000585042 TBL1XO60907 577 aa15.59■□□□□ 0.09
VAPA-209ENST00000585042 DKK1O94907 266 aa15.59■□□□□ 0.09
VAPA-209ENST00000585042 CD27P26842 260 aa15.59■□□□□ 0.09
VAPA-209ENST00000585042 CSNK1EP49674 416 aaKnown RBP15.59■□□□□ 0.09
VAPA-209ENST00000585042 ST8SIA6P61647 398 aa15.59■□□□□ 0.09
VAPA-209ENST00000585042 GCNT1Q02742 428 aa15.59■□□□□ 0.09
VAPA-209ENST00000585042 MEA1Q16626 185 aa15.59■□□□□ 0.09
VAPA-209ENST00000585042 FAM133BQ5BKY9 247 aaKnown RBP15.59■□□□□ 0.09
VAPA-209ENST00000585042 ZNF776Q68DI1 518 aaPredicted RBP15.59■□□□□ 0.09
VAPA-209ENST00000585042 LRSAM1Q6UWE0 723 aa15.59■□□□□ 0.09
VAPA-209ENST00000585042 FAM124AQ86V42 546 aa15.59■□□□□ 0.09
VAPA-209ENST00000585042 PROSER1Q86XN7 944 aa15.59■□□□□ 0.09
VAPA-209ENST00000585042 CCDC117Q8IWD4 279 aaPredicted RBP15.59■□□□□ 0.09
VAPA-209ENST00000585042 PPM1KQ8N3J5 372 aa15.59■□□□□ 0.09
VAPA-209ENST00000585042 HJURPQ8NCD3 748 aaPredicted RBP15.59■□□□□ 0.09
VAPA-209ENST00000585042 LMO3Q8TAP4 145 aa15.59■□□□□ 0.09
VAPA-209ENST00000585042 LMLNQ96KR4 655 aa15.59■□□□□ 0.09
VAPA-209ENST00000585042 RSPH9Q9H1X1 276 aaPredicted RBP15.59■□□□□ 0.09
VAPA-209ENST00000585042 C6orf106Q9H6K1 298 aaPredicted RBP15.59■□□□□ 0.09
VAPA-209ENST00000585042 IL21RQ9HBE5 538 aa15.59■□□□□ 0.09
VAPA-209ENST00000585042 TLR6Q9Y2C9 796 aa15.59■□□□□ 0.09
VAPA-209ENST00000585042 SPEGQ15772 3267 aa15.59■□□□□ 0.09
VAPA-209ENST00000585042 A0A1B0GVT2 93 aa15.58■□□□□ 0.08
VAPA-209ENST00000585042 TARSL2A2RTX5 802 aaKnown RBP15.58■□□□□ 0.08
VAPA-209ENST00000585042 TRIM49BA6NDI0 452 aa15.58■□□□□ 0.08
VAPA-209ENST00000585042 PCDHGA12O60330 932 aa15.58■□□□□ 0.08
VAPA-209ENST00000585042 RNASEH1O60930 286 aaKnown RBP15.58■□□□□ 0.08
VAPA-209ENST00000585042 CD70P32970 193 aa15.58■□□□□ 0.08
VAPA-209ENST00000585042 ACADSBP45954 432 aa15.58■□□□□ 0.08
VAPA-209ENST00000585042 RGS7P49802 495 aa15.58■□□□□ 0.08
VAPA-209ENST00000585042 RFWD3Q6PCD5 774 aa15.58■□□□□ 0.08
VAPA-209ENST00000585042 SLCO6A1Q86UG4 719 aa15.58■□□□□ 0.08
VAPA-209ENST00000585042 MFN1Q8IWA4 741 aa15.58■□□□□ 0.08
VAPA-209ENST00000585042 EHBP1Q8NDI1 1231 aa15.58■□□□□ 0.08
VAPA-209ENST00000585042 RHBDD1Q8TEB9 315 aa15.58■□□□□ 0.08
VAPA-209ENST00000585042 STK32AQ8WU08 396 aa15.58■□□□□ 0.08
VAPA-209ENST00000585042 IGSF8Q969P0 613 aa15.58■□□□□ 0.08
VAPA-209ENST00000585042 BIRC7Q96CA5 298 aa15.58■□□□□ 0.08
VAPA-209ENST00000585042 SERPINB11Q96P15 392 aa15.58■□□□□ 0.08
VAPA-209ENST00000585042 ZSWIM1Q9BR11 485 aa15.58■□□□□ 0.08
VAPA-209ENST00000585042 TM9SF3Q9HD45 589 aa15.58■□□□□ 0.08
VAPA-209ENST00000585042 TPX2Q9ULW0 747 aaKnown RBP15.58■□□□□ 0.08
VAPA-209ENST00000585042 CNTN6Q9UQ52 1028 aa15.58■□□□□ 0.08
VAPA-209ENST00000585042 ANKRD6Q9Y2G4 727 aa15.58■□□□□ 0.08
VAPA-209ENST00000585042 FNDC3AQ9Y2H6 1198 aaKnown RBP15.58■□□□□ 0.08
VAPA-209ENST00000585042 PKD1L2Q7Z442 2459 aa15.57■□□□□ 0.08
VAPA-209ENST00000585042 GOLGA6L7A0A1B0GV03 622 aa15.57■□□□□ 0.08
VAPA-209ENST00000585042 M0QYV0 167 aa15.57■□□□□ 0.08
VAPA-209ENST00000585042 TAF4O00268 1085 aa15.57■□□□□ 0.08
VAPA-209ENST00000585042 PAPSS1O43252 624 aaPredicted RBP15.57■□□□□ 0.08
VAPA-209ENST00000585042 GNA14O95837 355 aa15.57■□□□□ 0.08
VAPA-209ENST00000585042 SRPRAP08240 638 aaKnown RBP15.57■□□□□ 0.08
VAPA-209ENST00000585042 SLC6A4P31645 630 aa15.57■□□□□ 0.08
VAPA-209ENST00000585042 SGSHP51688 502 aa15.57■□□□□ 0.08
VAPA-209ENST00000585042 SCAPQ12770 1279 aa15.57■□□□□ 0.08
VAPA-209ENST00000585042 KIF19Q2TAC6 998 aa15.57■□□□□ 0.08
VAPA-209ENST00000585042 HNRNPA1L2Q32P51 320 aaKnown RBP15.57■□□□□ 0.08
VAPA-209ENST00000585042 CCDC40Q4G0X9 1142 aa15.57■□□□□ 0.08
VAPA-209ENST00000585042 SMYD5Q6GMV2 418 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms