RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 FBXO21O94952 628 aa15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 USP17L7P0C7H9 530 aa15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 RPL17P18621 184 aaKnown RBP15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 ATP11AP98196 1134 aa15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 OTUD4Q01804 1114 aaKnown RBP15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 GPR17Q13304 367 aa15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 CDO1Q16878 200 aa15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 CCDC14Q49A88 953 aa15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 SH3PXD2AQ5TCZ1 1133 aa15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 RNF19BQ6ZMZ0 732 aa15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 VSIG1Q86XK7 387 aa15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 ABHD8Q96I13 439 aa15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 RMDN2Q96LZ7 410 aa15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 SLC9A7Q96T83 725 aa15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 CNPY3Q9BT09 278 aa15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 OXCT2Q9BYC2 517 aaPredicted RBP15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 LRMDAQ9H2I8 198 aa15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 CNGB3Q9NQW8 809 aa15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 SAR1AQ9NR31 198 aa15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 NOP53Q9NZM5 478 aaKnown RBP15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 MTRRQ9UBK8 725 aa15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 PCDHB12Q9Y5F1 795 aa15.46■□□□□ 0.07
CDK5RAP3-236ENST00000584991 MTMR11A4FU01 709 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 CARNS1A5YM72 827 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 DPYSL4O14531 572 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 TRAFD1O14545 582 aaPredicted RBP15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 ADAM12O43184 909 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 CST8O60676 142 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 ENDOD1O94919 500 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 ZSCAN5DPP0CG00 497 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SDC4P31431 198 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 GPR15P49685 360 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 CCNG1P51959 295 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 DAOAP59103 153 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 KCNJ2P63252 427 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 MGAT5Q09328 741 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 ZKSCAN8Q15776 578 aaPredicted RBP15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SLC45A4Q5BKX6 768 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 ARCQ7LC44 396 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 DDX53Q86TM3 631 aaKnown RBP15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 TTC9BQ8N6N2 239 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 CPT1BQ92523 772 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 RAD9AQ99638 391 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 HERC2P3Q9BVR0 1158 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 PNPLA8Q9NP80 782 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 KLHL11Q9NVR0 708 aa15.46■□□□□ 0.06
CDK5RAP3-236ENST00000584991 CCDC85CA6NKD9 419 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 TLL1O43897 1013 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 VNN2O95498 520 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 ZBED1O96006 694 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 IL1BP01584 269 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 LINC00271P0C7V0 271 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 ETS1P14921 441 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 OR1D2P34982 312 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 RPA3P35244 121 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 PPM1AP35813 382 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 GLUD2P49448 558 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 GPX6P59796 221 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 DSG1Q02413 1049 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 DDR2Q16832 855 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 RAB6CQ53S08 254 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 COL13A1Q5TAT6 717 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SDHAF4Q5VUM1 108 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 FYB2Q5VWT5 728 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 TXNRD3NBQ6F5E7 133 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 HFE2Q6ZVN8 426 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 DEFB106AQ8N104 65 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SCAMP5Q8TAC9 235 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 PHOSPHO2Q8TCD6 241 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 RSRC1Q96IZ7 334 aaKnown RBP15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 CYTH2Q99418 400 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 RAB6CQ9H0N0 254 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.45■□□□□ 0.064e-8■□□□□ 8
CDK5RAP3-236ENST00000584991 SLC27A5Q9Y2P5 690 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 BACE2Q9Y5Z0 518 aa15.45■□□□□ 0.06
CDK5RAP3-236ENST00000584991 WDR27A2RRH5 827 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 YJEFN3A6XGL0 299 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 E7ENQ6 273 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 TNFRSF10BO14763 440 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 MCF2LO15068 1137 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 IFNB1P01574 187 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 MIPP30301 263 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 MAGEA11P43364 429 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SLC5A3P53794 718 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 YWHAZP63104 245 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 ROR1Q01973 937 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SMARCB1Q12824 385 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 IFRD2Q12894 506 aaPredicted RBP15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 TFDP2Q14188 446 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 FASTKD3Q14CZ7 662 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SLC8B1Q6J4K2 584 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 C4orf22Q6V702 233 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 C3orf62Q6ZUJ4 267 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 PRUNE1Q86TP1 453 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 PALM2Q8IXS6 379 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 VPS52Q8N1B4 723 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SPPL2BQ8TCT7 592 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 PAIP2Q9BPZ3 127 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 MTIF3Q9H2K0 278 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 CRISPLD1Q9H336 500 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms