RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 PCMTD1Q96MG8 357 aaPredicted RBP16.32■□□□□ 0.2
SKA2-209ENST00000583976 DCLK3Q9C098 648 aa16.32■□□□□ 0.2
SKA2-209ENST00000583976 FAM124BQ9H5Z6 455 aaPredicted RBP16.32■□□□□ 0.2
SKA2-209ENST00000583976 SIX2Q9NPC8 291 aa16.32■□□□□ 0.2
SKA2-209ENST00000583976 ELOVL2Q9NXB9 296 aa16.32■□□□□ 0.2
SKA2-209ENST00000583976 SUSD2Q9UGT4 822 aa16.32■□□□□ 0.2
SKA2-209ENST00000583976 SFMBT1Q9UHJ3 866 aa16.32■□□□□ 0.2
SKA2-209ENST00000583976 STRIP2Q9ULQ0 834 aa16.32■□□□□ 0.2
SKA2-209ENST00000583976 FNDC3AQ9Y2H6 1198 aaKnown RBP16.32■□□□□ 0.2
SKA2-209ENST00000583976 ZNF510Q9Y2H8 683 aa16.32■□□□□ 0.2
SKA2-209ENST00000583976 ANKRD11Q6UB99 2663 aaPredicted RBP16.32■□□□□ 0.2
SKA2-209ENST00000583976 TP53BP1Q12888 1972 aaPredicted RBP16.31■□□□□ 0.2
SKA2-209ENST00000583976 TEX33O43247 280 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 SYNCRIPO60506 623 aaKnown RBP16.31■□□□□ 0.2
SKA2-209ENST00000583976 ZBED1O96006 694 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 CYBBP04839 570 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 EPHX1P07099 455 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 FTH1P19P0C7X4 201 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 GNSP15586 552 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 HLA-FP30511 346 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 CHKAP35790 457 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 SYCP1Q15431 976 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 FILIP1LQ4L180 1135 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 WDR45BQ5MNZ6 344 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 LAYNQ6UX15 382 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 ARHGAP18Q8N392 663 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 TTC39CQ8N584 583 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 UBR7Q8N806 425 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 ANKRD52Q8NB46 1076 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 WFDC5Q8TCV5 224 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 DNASE2BQ8WZ79 361 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 PRCCQ92733 491 aaPredicted RBP16.31■□□□□ 0.2
SKA2-209ENST00000583976 FOXJ1Q92949 421 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 PLD4Q96BZ4 506 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 SIPA1Q96FS4 1042 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 NAP1L5Q96NT1 182 aaPredicted RBP16.31■□□□□ 0.2
SKA2-209ENST00000583976 DNAJC12Q9UKB3 198 aa16.31■□□□□ 0.2
SKA2-209ENST00000583976 AJAP1Q9UKB5 411 aaPredicted RBP16.31■□□□□ 0.2
SKA2-209ENST00000583976 NYNRINQ9P2P1 1898 aaKnown RBP16.31■□□□□ 0.2
SKA2-209ENST00000583976 ATRXP46100 2492 aa16.3■□□□□ 0.2
SKA2-209ENST00000583976 PLXNB3Q9ULL4 1909 aa16.3■□□□□ 0.2
SKA2-209ENST00000583976 A0A1B0GTW7 788 aa16.3■□□□□ 0.2
SKA2-209ENST00000583976 YJEFN3A6XGL0 299 aa16.3■□□□□ 0.2
SKA2-209ENST00000583976 E7ENQ6 273 aa16.3■□□□□ 0.2
SKA2-209ENST00000583976 RNF225M0QZC1 329 aaPredicted RBP16.3■□□□□ 0.2
SKA2-209ENST00000583976 PIK3R2O00459 728 aa16.3■□□□□ 0.2
SKA2-209ENST00000583976 XPO1O14980 1071 aaKnown RBP16.3■□□□□ 0.2
SKA2-209ENST00000583976 CALCAP01258 141 aa16.3■□□□□ 0.2
SKA2-209ENST00000583976 KRT5P13647 590 aa16.3■□□□□ 0.2
SKA2-209ENST00000583976 USP8P40818 1118 aa16.3■□□□□ 0.2
SKA2-209ENST00000583976 BCAT1P54687 386 aa16.3■□□□□ 0.2
SKA2-209ENST00000583976 FANCCQ00597 558 aa16.3■□□□□ 0.2
SKA2-209ENST00000583976 EIF4HQ15056 248 aaKnown RBP16.3■□□□□ 0.2
SKA2-209ENST00000583976 TRIP4Q15650 581 aaPredicted RBP16.3■□□□□ 0.2
SKA2-209ENST00000583976 TRIP6Q15654 476 aaKnown RBP16.3■□□□□ 0.2
SKA2-209ENST00000583976 KLHDC7AQ5VTJ3 777 aa16.3■□□□□ 0.2
SKA2-209ENST00000583976 DPY19L2P1Q6NXN4 242 aa16.3■□□□□ 0.2
SKA2-209ENST00000583976 METTL3Q86U44 580 aaKnown RBP16.3■□□□□ 0.2
SKA2-209ENST00000583976 UBA3Q8TBC4 463 aa16.3■□□□□ 0.2
SKA2-209ENST00000583976 UCMAQ8WVF2 138 aa16.3■□□□□ 0.2
SKA2-209ENST00000583976 SNX19Q92543 992 aa16.3■□□□□ 0.2
SKA2-209ENST00000583976 DNAI2Q9GZS0 605 aa16.3■□□□□ 0.2
SKA2-209ENST00000583976 ITM2CQ9NQX7 267 aa16.3■□□□□ 0.2
SKA2-209ENST00000583976 FAM207AQ9NSI2 230 aaPredicted RBP16.3■□□□□ 0.2
SKA2-209ENST00000583976 EIF2B4Q9UI10 523 aaKnown RBP16.3■□□□□ 0.2
SKA2-209ENST00000583976 BAHCC1Q9P281 2608 aa16.3■□□□□ 0.2
SKA2-209ENST00000583976 TAF4O00268 1085 aa16.29■□□□□ 0.2
SKA2-209ENST00000583976 IGLV3-19P01714 112 aa16.29■□□□□ 0.2
SKA2-209ENST00000583976 CD19P15391 556 aa16.29■□□□□ 0.2
SKA2-209ENST00000583976 RING1Q06587 406 aa16.29■□□□□ 0.2
SKA2-209ENST00000583976 RAPGEF1Q13905 1077 aa16.29■□□□□ 0.2
SKA2-209ENST00000583976 ZNF423Q2M1K9 1284 aa16.29■□□□□ 0.2
SKA2-209ENST00000583976 FNDC3BQ53EP0 1204 aaKnown RBP16.29■□□□□ 0.2
SKA2-209ENST00000583976 PM20D1Q6GTS8 502 aa16.29■□□□□ 0.2
SKA2-209ENST00000583976 ENOSF1Q7L5Y1 443 aa16.29■□□□□ 0.2
SKA2-209ENST00000583976 C6orf106Q9H6K1 298 aaPredicted RBP16.29■□□□□ 0.2
SKA2-209ENST00000583976 RTN4Q9NQC3 1192 aaKnown RBP16.29■□□□□ 0.2
SKA2-209ENST00000583976 ABCB8Q9NUT2 735 aa16.29■□□□□ 0.2
SKA2-209ENST00000583976 FHOD1Q9Y613 1164 aa16.29■□□□□ 0.2
SKA2-209ENST00000583976 PTPRBP23467 1997 aa16.29■□□□□ 0.2
SKA2-209ENST00000583976 SMG1Q96Q15 3661 aaKnown RBP16.28■□□□□ 0.2
SKA2-209ENST00000583976 A0A1B0GVT2 93 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 H0Y626 953 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 O00370 1275 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 NPC1O15118 1278 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 BCAT2O15382 392 aaPredicted RBP16.28■□□□□ 0.2
SKA2-209ENST00000583976 CBFA2T3O75081 653 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 GABBR2O75899 941 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 TRIM16O95361 564 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 PNMA6AP0CW24 399 aaPredicted RBP16.28■□□□□ 0.2
SKA2-209ENST00000583976 ACSL1P33121 698 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 RGS7P49802 495 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 UBASH3AP57075 661 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 BST2Q10589 180 aaKnown RBP16.28■□□□□ 0.2
SKA2-209ENST00000583976 PTPRNQ16849 979 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 SGO2Q562F6 1265 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 BSPRYQ5W0U4 402 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 CHST9Q7L1S5 443 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 CADM4Q8NFZ8 388 aa16.28■□□□□ 0.2
SKA2-209ENST00000583976 OR2T3Q8NH03 318 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms