RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 THRAP10827 490 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 AP3M2P53677 418 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 STX1BP61266 288 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 RALGDSQ12967 914 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 AGKQ53H12 422 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 CLVS1Q8IUQ0 354 aaPredicted RBP10.85□□□□□ -0.67
RNF43-207ENST00000583753 MYO1HQ8N1T3 1032 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 HTR3CQ8WXA8 447 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 FBXL18Q96ME1 805 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 MPHOSPH6Q99547 160 aaKnown RBP10.85□□□□□ -0.67
RNF43-207ENST00000583753 APBA2Q99767 749 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 UPF3AQ9H1J1 476 aaKnown RBP10.85□□□□□ -0.67
RNF43-207ENST00000583753 MMADHCQ9H3L0 296 aaPredicted RBP10.85□□□□□ -0.67
RNF43-207ENST00000583753 ST6GALNAC4Q9H4F1 302 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 ZNF408Q9H9D4 720 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 MYOZ2Q9NPC6 264 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 SYBUQ9NX95 663 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 THEGQ9P2T0 379 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 DOLKQ9UPQ8 538 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 KLHL33A6NCF5 533 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 SLC15A5A6NIM6 579 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 SPDYE16A6NNV3 312 aaPredicted RBP10.85□□□□□ -0.67
RNF43-207ENST00000583753 FOXD2O60548 495 aaPredicted RBP10.85□□□□□ -0.67
RNF43-207ENST00000583753 PMPCBO75439 489 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 LYPLA2O95372 231 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 CCDC130P13994 396 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 HNRNPLP14866 589 aaKnown RBP eCLIP10.85□□□□□ -0.67
RNF43-207ENST00000583753 ACAT1P24752 427 aaKnown RBP10.85□□□□□ -0.67
RNF43-207ENST00000583753 KLF10Q13118 480 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 POU6F1Q14863 301 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 POTEAQ6S8J7 498 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 MPZL3Q6UWV2 235 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 C16orf89Q6UX73 402 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 PACS1Q6VY07 963 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 CHSY1Q86X52 802 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 APLFQ8IW19 511 aaPredicted RBP10.85□□□□□ -0.67
RNF43-207ENST00000583753 PCDH19Q8TAB3 1148 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 SLC7A14Q8TBB6 771 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 CLEC4CQ8WTT0 213 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 DTNBP1Q96EV8 351 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 ELMO2Q96JJ3 720 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 EFHD1Q9BUP0 239 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 PCDH18Q9HCL0 1135 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 TMPRSS4Q9NRS4 437 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 RPL26L1Q9UNX3 145 aaKnown RBP10.85□□□□□ -0.67
RNF43-207ENST00000583753 GNEQ9Y223 722 aaKnown RBP10.85□□□□□ -0.67
RNF43-207ENST00000583753 SH3BP1Q9Y3L3 701 aa10.85□□□□□ -0.67
RNF43-207ENST00000583753 FARP1Q9Y4F1 1045 aaPredicted RBP10.85□□□□□ -0.67
RNF43-207ENST00000583753 SPATA31A6Q5VVP1 1343 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 NAV1Q8NEY1 1877 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 M0QYT0 321 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 ABLIM1O14639 778 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 TGDSO95455 350 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 CHRNGP07510 517 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 TXNP10599 105 aaKnown RBP10.84□□□□□ -0.67
RNF43-207ENST00000583753 FDFT1P37268 417 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 IDH3AP50213 366 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 ZNF143P52747 638 aaPredicted RBP10.84□□□□□ -0.67
RNF43-207ENST00000583753 SH3BGRP55822 239 aaPredicted RBP10.84□□□□□ -0.67
RNF43-207ENST00000583753 SP2Q02086 613 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 CACNB2Q08289 660 aaPredicted RBP10.84□□□□□ -0.67
RNF43-207ENST00000583753 CTC1Q2NKJ3 1217 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 SLC9B1Q4ZJI4 515 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 PITRM1Q5JRX3 1037 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 FBXO16Q8IX29 292 aaPredicted RBP10.84□□□□□ -0.67
RNF43-207ENST00000583753 DDIASQ8IXT1 998 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 AFAP1L2Q8N4X5 818 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 ZNF513Q8N8E2 541 aaPredicted RBP10.84□□□□□ -0.67
RNF43-207ENST00000583753 SIKE1Q9BRV8 207 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 GCOM2Q9BZD3 368 aaPredicted RBP10.84□□□□□ -0.67
RNF43-207ENST00000583753 DPP3Q9NY33 737 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 TEX264Q9Y6I9 313 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 JCHAINP01591 159 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 KCNA2P16389 499 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 SLC25A11Q02978 314 aaKnown RBP10.84□□□□□ -0.67
RNF43-207ENST00000583753 WASHC5Q12768 1159 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 KCTD2Q14681 263 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 FUT11Q495W5 492 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 FOXB2Q5VYV0 432 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 ITPRIPL1Q6GPH6 555 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 B3GNT6Q6ZMB0 384 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 NIPA1Q7RTP0 329 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 PQLC1Q8N2U9 271 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 C7orf26Q96N11 449 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 OR52B2Q96RD2 323 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 AGAP2Q99490 1192 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 SLC4A5Q9BY07 1137 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 CCDC90BQ9GZT6 254 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 OCEL1Q9H607 264 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 WDR41Q9HAD4 459 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 COMMD3-BMI1R4GMX3 469 aa10.84□□□□□ -0.67
RNF43-207ENST00000583753 F8W8V4 182 aa10.83□□□□□ -0.67
RNF43-207ENST00000583753 HCRTO43612 131 aa10.83□□□□□ -0.67
RNF43-207ENST00000583753 TRIM13O60858 407 aa10.83□□□□□ -0.67
RNF43-207ENST00000583753 VDRP11473 427 aa10.83□□□□□ -0.67
RNF43-207ENST00000583753 RBP5P82980 135 aa10.83□□□□□ -0.67
RNF43-207ENST00000583753 CXCL9Q07325 125 aa10.83□□□□□ -0.67
RNF43-207ENST00000583753 MPP3Q13368 585 aa10.83□□□□□ -0.67
RNF43-207ENST00000583753 ATP1A4Q13733 1029 aa10.83□□□□□ -0.67
RNF43-207ENST00000583753 TBCCQ15814 346 aa10.83□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms