RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 TRMT61AQ96FX7 289 aaKnown RBP5□□□□□ -1.61
NF1-220ENST00000581113 FAM118BQ9BPY3 351 aa5□□□□□ -1.61
NF1-220ENST00000581113 SENP7Q9BQF6 1050 aa5□□□□□ -1.61
NF1-220ENST00000581113 PAGR1Q9BTK6 254 aa5□□□□□ -1.61
NF1-220ENST00000581113 TRIM2Q9C040 744 aa5□□□□□ -1.61
NF1-220ENST00000581113 PABPC3Q9H361 631 aaKnown RBP5□□□□□ -1.61
NF1-220ENST00000581113 ELAC1Q9H777 363 aaKnown RBP5□□□□□ -1.61
NF1-220ENST00000581113 NRIP3Q9NQ35 241 aa5□□□□□ -1.61
NF1-220ENST00000581113 TRPC5Q9UL62 973 aaPredicted RBP5□□□□□ -1.61
NF1-220ENST00000581113 DAPP1Q9UN19 280 aa5□□□□□ -1.61
NF1-220ENST00000581113 B3GNT3Q9Y2A9 372 aa5□□□□□ -1.61
NF1-220ENST00000581113 ZBTB1Q9Y2K1 713 aa5□□□□□ -1.61
NF1-220ENST00000581113 ARHGEF17Q96PE2 2063 aaPredicted RBP4.99□□□□□ -1.61
NF1-220ENST00000581113 FAM90A18PA6NE21 464 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 FAM90A16PA6NEW6 464 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 FAM90A9PA6NNJ1 464 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 FAM90A5PA8MXJ8 464 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 LARGE1O95461 756 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 FAM90A15PP0C7V4 464 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 FAM90A14PP0C7W9 464 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 KELP23276 732 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 GRK5P34947 590 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 PNLIPRP1P54315 467 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 FAM3BP58499 235 aaPredicted RBP4.99□□□□□ -1.61
NF1-220ENST00000581113 TAS2R50P59544 299 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 RPL15P61313 204 aaKnown RBP4.99□□□□□ -1.61
NF1-220ENST00000581113 COLEC12Q5KU26 742 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 ERAP2Q6P179 960 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 RAB11FIP2Q7L804 512 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 LAS2Q8IYD9 372 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 SRFBP1Q8NEF9 429 aaKnown RBP4.99□□□□□ -1.61
NF1-220ENST00000581113 RUBCNQ92622 972 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 CELF1Q92879 486 aaKnown RBP4.99□□□□□ -1.61
NF1-220ENST00000581113 GPR78Q96P69 363 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 FCRL5Q96RD9 977 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 TM2D2Q9BX73 214 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 VPS16Q9H269 839 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 LIN7CQ9NUP9 197 aaKnown RBP4.99□□□□□ -1.61
NF1-220ENST00000581113 SLC12A4Q9UP95 1085 aa4.99□□□□□ -1.61
NF1-220ENST00000581113 KIF27Q86VH2 1401 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 PRG4Q92954 1404 aaPredicted RBP4.98□□□□□ -1.61
NF1-220ENST00000581113 TBC1D3DA0A087WVF3 549 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 TBC1D3IA0A087WXS9 549 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 TBC1D3EA0A087X179 549 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 TBC1D3KA0A087X1G2 549 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 TBC1D3BA6NDS4 549 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 TBC1D3FA6NER0 549 aaPredicted RBP4.98□□□□□ -1.61
NF1-220ENST00000581113 SLC38A8A6NNN8 435 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 EFCAB8A8MWE9 144 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 KCNU1A8MYU2 1149 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 TBC1D3LB9A6J9 549 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 INPPL1O15357 1258 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 ALDOAP04075 364 aaKnown RBP4.98□□□□□ -1.61
NF1-220ENST00000581113 TBC1D3HP0C7X1 549 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 SFPQP23246 707 aaKnown RBP eCLIP4.98□□□□□ -1.61
NF1-220ENST00000581113 IDUAP35475 653 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 FOXO1Q12778 655 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 MTA1Q13330 715 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 GLE1Q53GS7 698 aaKnown RBP4.98□□□□□ -1.61
NF1-220ENST00000581113 MEX3CQ5U5Q3 659 aaKnown RBP4.98□□□□□ -1.61
NF1-220ENST00000581113 ANO1Q5XXA6 986 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 TBC1D3GQ6DHY5 549 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 TBC1D3CQ6IPX1 549 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 SLC2A7Q6PXP3 512 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 RRAGAQ7L523 313 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 TBC1D3Q8IZP1 549 aaPredicted RBP4.98□□□□□ -1.61
NF1-220ENST00000581113 C3orf49Q96BT1 292 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 EVI5LQ96CN4 794 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 ZNF845Q96IR2 970 aaPredicted RBP4.98□□□□□ -1.61
NF1-220ENST00000581113 PPCSQ9HAB8 311 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 AGO4Q9HCK5 861 aaKnown RBP4.98□□□□□ -1.61
NF1-220ENST00000581113 SEPSECSQ9HD40 501 aaKnown RBP4.98□□□□□ -1.61
NF1-220ENST00000581113 SHROOM2Q13796 1616 aa4.98□□□□□ -1.61
NF1-220ENST00000581113 FNDC1Q4ZHG4 1894 aaPredicted RBP4.97□□□□□ -1.61
NF1-220ENST00000581113 IPO5O00410 1097 aaKnown RBP4.97□□□□□ -1.61
NF1-220ENST00000581113 IFRD1O00458 451 aaPredicted RBP4.97□□□□□ -1.61
NF1-220ENST00000581113 KAT7O95251 611 aa4.97□□□□□ -1.61
NF1-220ENST00000581113 PLAUP00749 431 aa4.97□□□□□ -1.61
NF1-220ENST00000581113 VEGFAP15692 232 aaPredicted RBP4.97□□□□□ -1.61
NF1-220ENST00000581113 ST6GAL1P15907 406 aa4.97□□□□□ -1.61
NF1-220ENST00000581113 ATP5F1P24539 256 aaPredicted RBP4.97□□□□□ -1.61
NF1-220ENST00000581113 GRK6P43250 576 aa4.97□□□□□ -1.61
NF1-220ENST00000581113 ZNF84P51523 738 aa4.97□□□□□ -1.61
NF1-220ENST00000581113 SLC37A1P57057 533 aa4.97□□□□□ -1.61
NF1-220ENST00000581113 RBM6P78332 1123 aaKnown RBP4.97□□□□□ -1.61
NF1-220ENST00000581113 GHRHRQ02643 423 aa4.97□□□□□ -1.61
NF1-220ENST00000581113 TLE3Q04726 772 aa4.97□□□□□ -1.61
NF1-220ENST00000581113 DMWDQ09019 674 aa4.97□□□□□ -1.61
NF1-220ENST00000581113 PRKG1Q13976 671 aa4.97□□□□□ -1.61
NF1-220ENST00000581113 MTX3Q5HYI7 312 aa4.97□□□□□ -1.61
NF1-220ENST00000581113 ZNF626Q68DY1 528 aa4.97□□□□□ -1.61
NF1-220ENST00000581113 TANGO2Q6ICL3 276 aa4.97□□□□□ -1.61
NF1-220ENST00000581113 ANO7Q6IWH7 933 aa4.97□□□□□ -1.61
NF1-220ENST00000581113 JMJD6Q6NYC1 403 aaPredicted RBP4.97□□□□□ -1.61
NF1-220ENST00000581113 DHRS13Q6UX07 377 aa4.97□□□□□ -1.61
NF1-220ENST00000581113 RFX6Q8HWS3 928 aa4.97□□□□□ -1.61
NF1-220ENST00000581113 UEVLDQ8IX04 471 aa4.97□□□□□ -1.61
NF1-220ENST00000581113 OTUD7AQ8TE49 926 aaPredicted RBP4.97□□□□□ -1.61
NF1-220ENST00000581113 CPT1BQ92523 772 aa4.97□□□□□ -1.61
NF1-220ENST00000581113 TRAPPC9Q96Q05 1148 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms