RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 PRR23BQ6ZRT6 265 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 SYT13Q7L8C5 426 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 CAMKK1Q8N5S9 505 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 USP33Q8TEY7 942 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 CENPIQ92674 756 aaPredicted RBP10.26□□□□□ -0.77
GGA3-209ENST00000580646 ZNF653Q96CK0 615 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 PNKPQ96T60 521 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 FAM204AQ9H8W3 233 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 POLR3BQ9NW08 1133 aaPredicted RBP10.26□□□□□ -0.77
GGA3-209ENST00000580646 MARK1Q9P0L2 795 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 CNOT8Q9UFF9 292 aaKnown RBP10.26□□□□□ -0.77
GGA3-209ENST00000580646 LCMT1Q9UIC8 334 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 GMEB2Q9UKD1 530 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 CHD5Q8TDI0 1954 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 A0A0A0MRY4 1105 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 TMEM191CA6NGB0 347 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 KCNU1A8MYU2 1149 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 EIF3CLB5ME19 914 aaKnown RBP10.25□□□□□ -0.77
GGA3-209ENST00000580646 M0QYT0 321 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 MSI1O43347 362 aaKnown RBP10.25□□□□□ -0.77
GGA3-209ENST00000580646 APOEP02649 317 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 KLKB1P03952 638 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 APODP05090 189 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 CYP1A2P05177 515 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 H2AFZP0C0S5 128 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 TMEM253P0C7T8 217 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 PDGFRAP16234 1089 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 GPD1P21695 349 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 CORO1AP31146 461 aaKnown RBP10.25□□□□□ -0.77
GGA3-209ENST00000580646 RDXP35241 583 aaKnown RBP10.25□□□□□ -0.77
GGA3-209ENST00000580646 SLC11A2P49281 568 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 CXCR3P49682 368 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 SULT1E1P49888 294 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 GALCP54803 685 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 AIF1P55008 147 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 RNASE9P60153 205 aaKnown RBP10.25□□□□□ -0.77
GGA3-209ENST00000580646 DMC1Q14565 340 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 TCEAL1Q15170 157 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 CCDC14Q49A88 953 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 C2orf27AQ580R0 203 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 ADGRF1Q5T601 910 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 LAIR1Q6GTX8 287 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 DCUN1D2Q6PH85 259 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 H2AFVQ71UI9 128 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 CEP68Q76N32 757 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 SND1Q7KZF4 910 aaKnown RBP eCLIP10.25□□□□□ -0.77
GGA3-209ENST00000580646 C12orf40Q86WS4 652 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 TMEM25Q86YD3 366 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 TMEM139Q8IV31 216 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 GPR161Q8N6U8 529 aaKnown RBP10.25□□□□□ -0.77
GGA3-209ENST00000580646 ATP6V0D2Q8N8Y2 350 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 SPC24Q8NBT2 197 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 JOSD2Q8TAC2 188 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 RXFP2Q8WXD0 754 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 ACDQ96AP0 544 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 BTN2A3PQ96KV6 586 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 MCEEQ96PE7 176 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 TBCBQ99426 244 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 EIF3CQ99613 913 aaKnown RBP10.25□□□□□ -0.77
GGA3-209ENST00000580646 BAG1Q99933 345 aaPredicted RBP10.25□□□□□ -0.77
GGA3-209ENST00000580646 NCAPGQ9BPX3 1015 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 DDX50Q9BQ39 737 aaKnown RBP10.25□□□□□ -0.77
GGA3-209ENST00000580646 THAP2Q9H0W7 228 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 LUC7LQ9NQ29 371 aaKnown RBP10.25□□□□□ -0.77
GGA3-209ENST00000580646 SPHK2Q9NRA0 654 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 DDIT4Q9NX09 232 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 ARHGEF38Q9NXL2 777 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 UVRAGQ9P2Y5 699 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 SLC12A6Q9UHW9 1150 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 AGO1Q9UL18 857 aaKnown RBP10.25□□□□□ -0.77
GGA3-209ENST00000580646 NCOR2Q9Y618 2525 aa10.25□□□□□ -0.77
GGA3-209ENST00000580646 ZNF292O60281 2723 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 ANTXRLA6NF34 631 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.24□□□□□ -0.77
GGA3-209ENST00000580646 GFRA2O00451 464 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 AXIN1O15169 862 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 HOXC11O43248 304 aaPredicted RBP10.24□□□□□ -0.77
GGA3-209ENST00000580646 ACSL4O60488 711 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 KAT7O95251 611 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 RETP07949 1114 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 GRIA2P42262 883 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 ID4P47928 161 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 SEC13P55735 322 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 RPL7AP62424 266 aaKnown RBP10.24□□□□□ -0.77
GGA3-209ENST00000580646 PITX1P78337 314 aaPredicted RBP10.24□□□□□ -0.77
GGA3-209ENST00000580646 MRPS21P82921 87 aaKnown RBP10.24□□□□□ -0.77
GGA3-209ENST00000580646 DEUP1Q05D60 604 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 MESP2Q0VG99 397 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 ANO4Q32M45 955 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 MPP7Q5T2T1 576 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 RNF43Q68DV7 783 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 ERMP1Q7Z2K6 904 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 DENND1CQ8IV53 801 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 SFTPA1Q8IWL2 248 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 ETFBKMTQ8IXQ9 262 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 EMC1Q8N766 993 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 NAT16Q8N8M0 369 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 CCDC112Q8NEF3 446 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 ADAM32Q8TC27 787 aa10.24□□□□□ -0.77
GGA3-209ENST00000580646 CTNNBL1Q8WYA6 563 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms