RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-208ENST00000580584 EPHX1P07099 455 aa16.08■□□□□ 0.16
PMP22-208ENST00000580584 GLI1P08151 1106 aa16.08■□□□□ 0.16
PMP22-208ENST00000580584 COPB1P53618 953 aaKnown RBP16.08■□□□□ 0.16
PMP22-208ENST00000580584 POLR2FP61218 127 aaKnown RBP16.08■□□□□ 0.16
PMP22-208ENST00000580584 CDK17Q00537 523 aa16.08■□□□□ 0.16
PMP22-208ENST00000580584 SLC6A3Q01959 620 aa16.08■□□□□ 0.16
PMP22-208ENST00000580584 EIF4EBP2Q13542 120 aaPredicted RBP16.08■□□□□ 0.16
PMP22-208ENST00000580584 FNDC3BQ53EP0 1204 aaKnown RBP16.08■□□□□ 0.16
PMP22-208ENST00000580584 C2CD6Q53TS8 623 aa16.08■□□□□ 0.16
PMP22-208ENST00000580584 FKBP15Q5T1M5 1219 aa16.08■□□□□ 0.16
PMP22-208ENST00000580584 MBLAC2Q68D91 279 aa16.08■□□□□ 0.16
PMP22-208ENST00000580584 MMS22LQ6ZRQ5 1243 aa16.08■□□□□ 0.16
PMP22-208ENST00000580584 KIAA0907Q7Z7F0 614 aaPredicted RBP16.08■□□□□ 0.16
PMP22-208ENST00000580584 LGI2Q8N0V4 545 aa16.08■□□□□ 0.16
PMP22-208ENST00000580584 EPS8L1Q8TE68 723 aa16.08■□□□□ 0.16
PMP22-208ENST00000580584 BTN2A3PQ96KV6 586 aa16.08■□□□□ 0.16
PMP22-208ENST00000580584 DDX50Q9BQ39 737 aaKnown RBP16.08■□□□□ 0.16
PMP22-208ENST00000580584 RTKNQ9BST9 563 aa16.08■□□□□ 0.16
PMP22-208ENST00000580584 SIK3Q9Y2K2 1263 aa16.08■□□□□ 0.16
PMP22-208ENST00000580584 MED19A0JLT2 244 aaPredicted RBP16.07■□□□□ 0.16
PMP22-208ENST00000580584 TYW5A2RUC4 315 aaKnown RBP16.07■□□□□ 0.16
PMP22-208ENST00000580584 LGALS16A8MUM7 142 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 SLC30A4O14863 429 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 ZNF217O75362 1048 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 GFPT2O94808 682 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 MMEP08473 750 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 TACR2P21452 398 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 CDH5P33151 784 aaPredicted RBP16.07■□□□□ 0.16
PMP22-208ENST00000580584 COPAP53621 1224 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 TYRO3Q06418 890 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 LMAN2Q12907 356 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 NME3Q13232 169 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 CDH18Q13634 790 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 NCAPHQ15003 741 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 SYCP1Q15431 976 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 PTPRNQ16849 979 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 FSCBQ5H9T9 825 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 OTUD1Q5VV17 481 aaPredicted RBP16.07■□□□□ 0.16
PMP22-208ENST00000580584 LYSMD4Q5XG99 296 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 SLC26A9Q7LBE3 791 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 CIR1Q86X95 450 aaPredicted RBP16.07■□□□□ 0.16
PMP22-208ENST00000580584 AOPEPQ8N6M6 819 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 SLC20A1Q8WUM9 679 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 RNF34Q969K3 372 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 LMLNQ96KR4 655 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 EDEM2Q9BV94 578 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 IRX2Q9BZI1 471 aaPredicted RBP16.07■□□□□ 0.16
PMP22-208ENST00000580584 HSD3B7Q9H2F3 369 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 PRDM16Q9HAZ2 1276 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 NLRC4Q9NPP4 1024 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 TMEM74BQ9NUR3 256 aa16.07■□□□□ 0.16
PMP22-208ENST00000580584 LIMA1Q9UHB6 759 aaKnown RBP16.07■□□□□ 0.16
PMP22-208ENST00000580584 MUC22E2RYF6 1773 aaPredicted RBP16.06■□□□□ 0.16
PMP22-208ENST00000580584 LNP1A1A4G5 178 aa16.06■□□□□ 0.16
PMP22-208ENST00000580584 KCNU1A8MYU2 1149 aa16.06■□□□□ 0.16
PMP22-208ENST00000580584 AP5Z1O43299 807 aa16.06■□□□□ 0.16
PMP22-208ENST00000580584 LUC7L3O95232 432 aaKnown RBP16.06■□□□□ 0.16
PMP22-208ENST00000580584 DLDP09622 509 aaKnown RBP16.06■□□□□ 0.16
PMP22-208ENST00000580584 ZNF18P17022 549 aa16.06■□□□□ 0.16
PMP22-208ENST00000580584 TFE3P19532 575 aaPredicted RBP16.06■□□□□ 0.16
PMP22-208ENST00000580584 ITPKAP23677 461 aa16.06■□□□□ 0.16
PMP22-208ENST00000580584 CCR1P32246 355 aa16.06■□□□□ 0.16
PMP22-208ENST00000580584 GGCXP38435 758 aa16.06■□□□□ 0.16
PMP22-208ENST00000580584 NUMBP49757 651 aa16.06■□□□□ 0.16
PMP22-208ENST00000580584 SNX16P57768 344 aa16.06■□□□□ 0.16
PMP22-208ENST00000580584 RNASE9P60153 205 aaKnown RBP16.06■□□□□ 0.16
PMP22-208ENST00000580584 NAA35Q5VZE5 725 aa16.06■□□□□ 0.16
PMP22-208ENST00000580584 SLC36A4Q6YBV0 504 aa16.06■□□□□ 0.16
PMP22-208ENST00000580584 TMPRSS6Q8IU80 811 aa16.06■□□□□ 0.16
PMP22-208ENST00000580584 ATP6V0D2Q8N8Y2 350 aa16.06■□□□□ 0.16
PMP22-208ENST00000580584 FIBINQ8TAL6 211 aa16.06■□□□□ 0.16
PMP22-208ENST00000580584 CPA5Q8WXQ8 436 aa16.06■□□□□ 0.16
PMP22-208ENST00000580584 ADAM33Q9BZ11 813 aa16.06■□□□□ 0.16
PMP22-208ENST00000580584 TMEM245Q9H330 911 aa16.06■□□□□ 0.16
PMP22-208ENST00000580584 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.06■□□□□ 0.16
PMP22-208ENST00000580584 NOCTQ9UK39 431 aaKnown RBP16.06■□□□□ 0.16
PMP22-208ENST00000580584 INTS6Q9UL03 887 aaKnown RBP16.06■□□□□ 0.16
PMP22-208ENST00000580584 PLA2G4CQ9UP65 541 aa16.06■□□□□ 0.16
PMP22-208ENST00000580584 F5H5T6 163 aa16.05■□□□□ 0.16
PMP22-208ENST00000580584 M0QYT0 321 aa16.05■□□□□ 0.16
PMP22-208ENST00000580584 KHNYNO15037 678 aaKnown RBP16.05■□□□□ 0.16
PMP22-208ENST00000580584 LSM8O95777 96 aaKnown RBP16.05■□□□□ 0.16
PMP22-208ENST00000580584 ATP5BP06576 529 aaKnown RBP16.05■□□□□ 0.16
PMP22-208ENST00000580584 ATP1A3P13637 1013 aa16.05■□□□□ 0.16
PMP22-208ENST00000580584 POLR2EP19388 210 aaKnown RBP16.05■□□□□ 0.16
PMP22-208ENST00000580584 ABCB4P21439 1286 aa16.05■□□□□ 0.16
PMP22-208ENST00000580584 CSKP41240 450 aa16.05■□□□□ 0.16
PMP22-208ENST00000580584 JAM2P57087 298 aa16.05■□□□□ 0.16
PMP22-208ENST00000580584 NOMO3P69849 1222 aa16.05■□□□□ 0.16
PMP22-208ENST00000580584 CENPCQ03188 943 aa16.05■□□□□ 0.16
PMP22-208ENST00000580584 E2F5Q15329 346 aa16.05■□□□□ 0.16
PMP22-208ENST00000580584 ANO6Q4KMQ2 910 aa16.05■□□□□ 0.16
PMP22-208ENST00000580584 FAM102AQ5T9C2 384 aaPredicted RBP16.05■□□□□ 0.16
PMP22-208ENST00000580584 STPG1Q5TH74 334 aa16.05■□□□□ 0.16
PMP22-208ENST00000580584 CAVIN1Q6NZI2 390 aaKnown RBP16.05■□□□□ 0.16
PMP22-208ENST00000580584 ERICH1Q86X53 443 aa16.05■□□□□ 0.16
PMP22-208ENST00000580584 XYLT1Q86Y38 959 aa16.05■□□□□ 0.16
PMP22-208ENST00000580584 ZDHHC17Q8IUH5 632 aa16.05■□□□□ 0.16
PMP22-208ENST00000580584 SLC41A1Q8IVJ1 513 aa16.05■□□□□ 0.16
PMP22-208ENST00000580584 ANKRD20A12PQ8NF67 263 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms