RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 NHLH1Q02575 133 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 MCL1Q07820 350 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 TCF15Q12870 199 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 NFATC3Q12968 1075 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 STRN3Q13033 797 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 BMS1Q14692 1282 aaKnown RBP4.3□□□□□ -1.72
DDX42-211ENST00000580108 STK38Q15208 465 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 XKR4Q5GH76 650 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 PPM1LQ5SGD2 360 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 JADE1Q6IE81 842 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 TRMT10BQ6PF06 316 aaKnown RBP4.3□□□□□ -1.72
DDX42-211ENST00000580108 DCLRE1AQ6PJP8 1040 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 PARM1Q6UWI2 310 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 CRELD2Q6UXH1 353 aaPredicted RBP4.3□□□□□ -1.72
DDX42-211ENST00000580108 ARHGEF18Q6ZSZ5 1173 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 FAM43BQ6ZT52 329 aaPredicted RBP4.3□□□□□ -1.72
DDX42-211ENST00000580108 CMASQ8NFW8 434 aaPredicted RBP4.3□□□□□ -1.72
DDX42-211ENST00000580108 NOC3LQ8WTT2 800 aaKnown RBP4.3□□□□□ -1.72
DDX42-211ENST00000580108 RSPH1Q8WYR4 309 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 LARP4BQ92615 738 aaKnown RBP4.3□□□□□ -1.72
DDX42-211ENST00000580108 FGF14Q92915 247 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 SAAL1Q96ER3 474 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 MCRS1Q96EZ8 462 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 CCDC140Q96MF4 163 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 NECTIN4Q96NY8 510 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 PGLYRP2Q96PD5 576 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 MSTO1Q9BUK6 570 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 CCSER1Q9C0I3 900 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 VPS11Q9H270 941 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 PCIF1Q9H4Z3 704 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 WDR6Q9NNW5 1121 aaKnown RBP4.3□□□□□ -1.72
DDX42-211ENST00000580108 HSPBP1Q9NZL4 362 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 FNIP2Q9P278 1114 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 DNMT3BQ9UBC3 853 aaKnown RBP4.3□□□□□ -1.72
DDX42-211ENST00000580108 MTRRQ9UBK8 725 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 FBXL5Q9UKA1 691 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 TBX20Q9UMR3 447 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 ZDHHC9Q9Y397 364 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 NR2E1Q9Y466 385 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 SRPRBQ9Y5M8 271 aaKnown RBP4.3□□□□□ -1.72
DDX42-211ENST00000580108 NUMBLQ9Y6R0 609 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 CACNA1IQ9P0X4 2223 aa4.3□□□□□ -1.72
DDX42-211ENST00000580108 PIEZO1Q92508 2521 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 PTPRDP23468 1912 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 GREB1Q4ZG55 1949 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 ANAPC1Q9H1A4 1944 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 PTPRJQ12913 1337 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 NUP210Q8TEM1 1887 aaPredicted RBP4.29□□□□□ -1.72
DDX42-211ENST00000580108 A0A0B4J269 797 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 FSD2A1L4K1 749 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 TMEM189-UBE2V1I3L0A0 370 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 OGTO15294 1046 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 CLDN3O15551 220 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 MOSPD3O75425 235 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 KLHL18O94889 574 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 CNOT4O95628 575 aaKnown RBP4.29□□□□□ -1.72
DDX42-211ENST00000580108 PIGRP01833 764 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 KCNE1P15382 129 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 CD72P21854 359 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 AVPR2P30518 371 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 ADSSP30520 456 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 HOXC13P31276 330 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 HOXD13P35453 343 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 ETFBP38117 255 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 STAT6P42226 847 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 GDF5P43026 501 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 SELENOPP49908 381 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 MRE11P49959 708 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 HMGA2P52926 109 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 GTF2BQ00403 316 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 HTR4Q13639 388 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 RAB33AQ14088 237 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 SLC39A14Q15043 492 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 ZBTB6Q15916 424 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 CTXN3Q4LDR2 81 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 STXBP5Q5T5C0 1151 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 LIN9Q5TKA1 542 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 SDHAF4Q5VUM1 108 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 RRAGBQ5VZM2 374 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 SHC4Q6S5L8 630 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 C15orf39Q6ZRI6 1047 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 OTOP3Q7RTS5 596 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 SUGP1Q8IWZ8 645 aaKnown RBP4.29□□□□□ -1.72
DDX42-211ENST00000580108 NELFCDQ8IXH7 590 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 RBM12BQ8IXT5 1001 aaKnown RBP4.29□□□□□ -1.72
DDX42-211ENST00000580108 SLC44A3Q8N4M1 653 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 DTX3Q8N9I9 347 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 ATAD1Q8NBU5 361 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 LINC00301Q8NCQ3 95 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 OR10T2Q8NGX3 314 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 PIP4K2CQ8TBX8 421 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 PHOSPHO1Q8TCT1 267 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 FGF13Q92913 245 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 DHX58Q96C10 678 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 RSPRY1Q96DX4 576 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 AK8Q96MA6 479 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 RTP3Q9BQQ7 232 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 CBWD1Q9BRT8 395 aa4.29□□□□□ -1.72
DDX42-211ENST00000580108 NTPCRQ9BSD7 190 aaKnown RBP4.29□□□□□ -1.72
DDX42-211ENST00000580108 JAM3Q9BX67 310 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms