RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.33□□□□□ -0.12
TSEN54-206ENST00000579449 AZIN2Q96A70 460 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 PABPC5Q96DU9 382 aaKnown RBP14.33□□□□□ -0.12
TSEN54-206ENST00000579449 PRMT1Q99873 361 aaKnown RBP14.33□□□□□ -0.12
TSEN54-206ENST00000579449 DCLK3Q9C098 648 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 CFAP97Q9P2B7 532 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 AGO1Q9UL18 857 aaKnown RBP14.33□□□□□ -0.12
TSEN54-206ENST00000579449 DOCK8Q8NF50 2099 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 APOL1O14791 398 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 DAPK3O43293 454 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 GREM1O60565 184 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 ABCB7O75027 752 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 SLU7O95391 586 aaKnown RBP14.32□□□□□ -0.12
TSEN54-206ENST00000579449 LATS1O95835 1130 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 TACR2P21452 398 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 HTR7P34969 479 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 LTBRP36941 435 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 ATAT1Q5SQI0 421 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 ACBD5Q5T8D3 534 aaPredicted RBP14.32□□□□□ -0.12
TSEN54-206ENST00000579449 SLC9A4Q6AI14 798 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 CES5AQ6NT32 575 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 Q6ZNB5 142 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 Q7L0L9 218 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 GET4Q7L5D6 327 aaPredicted RBP14.32□□□□□ -0.12
TSEN54-206ENST00000579449 CHSY1Q86X52 802 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 DDX42Q86XP3 938 aaKnown RBP eCLIP14.32□□□□□ -0.12
TSEN54-206ENST00000579449 TTC16Q8NEE8 873 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 SH3RF2Q8TEC5 729 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 USP13Q92995 863 aaPredicted RBP14.32□□□□□ -0.12
TSEN54-206ENST00000579449 TBC1D31Q96DN5 1066 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 MSLNLQ96KJ4 702 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 ARHGEF4Q9NR80 690 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 RBM12Q9NTZ6 932 aaKnown RBP14.32□□□□□ -0.12
TSEN54-206ENST00000579449 TDP1Q9NUW8 608 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 ETNK2Q9NVF9 386 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 LSM7Q9UK45 103 aaKnown RBP14.32□□□□□ -0.12
TSEN54-206ENST00000579449 VANGL2Q9ULK5 521 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 NEU3Q9UQ49 428 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 CCL26Q9Y258 94 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 R3HDM2Q9Y2K5 976 aaKnown RBP14.32□□□□□ -0.12
TSEN54-206ENST00000579449 SH3BP1Q9Y3L3 701 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 MFHAS1Q9Y4C4 1052 aa14.32□□□□□ -0.12
TSEN54-206ENST00000579449 BRWD1Q9NSI6 2320 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 GOLGA6L10A0A0M3HER8 536 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 SCAMP3O14828 347 aaKnown RBP14.31□□□□□ -0.12
TSEN54-206ENST00000579449 DCLK1O15075 740 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 PRAMEF12O95522 483 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 ZFXP17010 805 aaPredicted RBP14.31□□□□□ -0.12
TSEN54-206ENST00000579449 ERCC2P18074 760 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 EPHB2P29323 1055 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 HOXC13P31276 330 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 SLC6A4P31645 630 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 FAM133BQ5BKY9 247 aaKnown RBP14.31□□□□□ -0.12
TSEN54-206ENST00000579449 NCBP2-AS2Q69YL0 99 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 RWDD4Q6NW29 188 aaKnown RBP14.31□□□□□ -0.12
TSEN54-206ENST00000579449 FBXL22Q6P050 247 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 C1orf228Q6PIY5 440 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 NPNTQ6UXI9 565 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 LRRC31Q6UY01 552 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 HTR3DQ70Z44 454 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 ARID3BQ8IVW6 561 aaPredicted RBP14.31□□□□□ -0.12
TSEN54-206ENST00000579449 NPAS3Q8IXF0 933 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 LGI2Q8N0V4 545 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 PLD5Q8N7P1 536 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 PRELID2Q8N945 189 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 C1orf54Q8WWF1 131 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 MYLIPQ8WY64 445 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 HAUS1Q96CS2 278 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 MYEOVQ96EZ4 313 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 RPGRIP1Q96KN7 1286 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 PRDM16Q9HAZ2 1276 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 STIM2Q9P246 746 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 DENND4AQ7Z401 1863 aa14.31□□□□□ -0.12
TSEN54-206ENST00000579449 IGLV3-10A0A075B6K4 115 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 F5H5T6 163 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 CCDC188H7C350 402 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 APOC4-APOC2K7ER74 178 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 TRDMT1O14717 391 aaKnown RBP14.3□□□□□ -0.12
TSEN54-206ENST00000579449 APOC2P02655 101 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 PECAM1P16284 738 aaPredicted RBP14.3□□□□□ -0.12
TSEN54-206ENST00000579449 TGM2P21980 687 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 WEE1P30291 646 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 MTHFRP42898 656 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 IRAK1P51617 712 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 USP4Q13107 963 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 CYP1B1Q16678 543 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 ADGRF1Q5T601 910 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 GPR153Q6NV75 609 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 RFWD3Q6PCD5 774 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 TTC13Q8NBP0 860 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 RIN3Q8TB24 985 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 ZSCAN18Q8TBC5 510 aaPredicted RBP14.3□□□□□ -0.12
TSEN54-206ENST00000579449 ATG4AQ8WYN0 398 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 FGF13Q92913 245 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 IGSF8Q969P0 613 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 MAGOHBQ96A72 148 aaKnown RBP14.3□□□□□ -0.12
TSEN54-206ENST00000579449 RIPOR3Q96MK2 946 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 CDX2Q99626 313 aaPredicted RBP14.3□□□□□ -0.12
TSEN54-206ENST00000579449 FAM118BQ9BPY3 351 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 DDX50Q9BQ39 737 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms