RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 SPATA20Q8TB22 786 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 WFDC5Q8TCV5 224 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 IRGQQ8WZA9 623 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 TTC17Q96AE7 1141 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 BIRC7Q96CA5 298 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 MYO19Q96H55 970 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 CDC6Q99741 560 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 TM9SF3Q9HD45 589 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 HESX1Q9UBX0 185 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 BTBD3Q9Y2F9 522 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 ANKRD6Q9Y2G4 727 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 SNX11Q9Y5W9 270 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 FLRT2O43155 660 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 IRAK2O43187 625 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 SEMA4FO95754 770 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 FYNP06241 537 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 ATP5BP06576 529 aaKnown RBP11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 PAEPP09466 180 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 LCP1P13796 627 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 CD19P15391 556 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 TBXAS1P24557 533 aaPredicted RBP11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 CD27P26842 260 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 SLC6A4P31645 630 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 GRIA4P48058 902 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 YWHAEP62258 255 aaKnown RBP11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 PNOCQ13519 176 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 ARID5BQ14865 1188 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 SUZ12Q15022 739 aaKnown RBP11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 DCAF17Q5H9S7 520 aaPredicted RBP11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 ZNF658Q5TYW1 1059 aaPredicted RBP11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 TCERG1LQ5VWI1 586 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 NADSYN1Q6IA69 706 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 RFWD3Q6PCD5 774 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 UNC45BQ8IWX7 931 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 FMR1NBQ8N0W7 255 aaPredicted RBP11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 SIX6OS1Q8N1H7 587 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 FIBINQ8TAL6 211 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 LMO3Q8TAP4 145 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 RHBDD1Q8TEB9 315 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 MYEOVQ96EZ4 313 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 GSDMAQ96QA5 445 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 BTBD1Q9H0C5 482 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 RSPH9Q9H1X1 276 aaPredicted RBP11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 CCDC86Q9H6F5 360 aaKnown RBP11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 SGK2Q9HBY8 427 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 DKK4Q9UBT3 224 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 SUN2Q9UH99 717 aa11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 INTS6Q9UL03 887 aaKnown RBP11.08□□□□□ -0.64
CSNK1D-210ENST00000579308 CEP192Q8TEP8 1941 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 KCNK3O14649 394 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 PCDHGA12O60330 932 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 ACSL4O60488 711 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 TBL1XO60907 577 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 IGHV4-34P06331 123 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 CTSKP43235 329 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 RPL34P49207 117 aaKnown RBP11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 SLC11A2P49281 568 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 RGS7P49802 495 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 LRMPQ12912 555 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 TEAD4Q15561 434 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 NUGGCQ68CJ6 796 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 TMEM270Q6UE05 265 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 USP30Q70CQ3 517 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 ENGASEQ8NFI3 743 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 CLEC4CQ8WTT0 213 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 GOLGA1Q92805 767 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 IGSF8Q969P0 613 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 MRGPRX3Q96LB0 322 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 HSFY1Q96LI6 401 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 MTG2Q9H4K7 406 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 GDPD2Q9HCC8 539 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 RMND1Q9NWS8 449 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 ARMCX3Q9UH62 379 aaPredicted RBP11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 ATP6V1DQ9Y5K8 247 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 APC2O95996 2303 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 CABIN1Q9Y6J0 2220 aa11.07□□□□□ -0.64
CSNK1D-210ENST00000579308 TRIM49BA6NDI0 452 aa11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 H0Y8X5 98 aa11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 PAPSS1O43252 624 aaPredicted RBP11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 TNFSF14O43557 240 aa11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 LTFP02788 710 aa11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 DNTTP04053 509 aa11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 POLR2EP19388 210 aaKnown RBP11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 FMO5P49326 533 aa11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 GALCP54803 685 aa11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 TBX4P57082 545 aa11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 LRRC63Q05C16 580 aa11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 CAMK2BQ13554 666 aa11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 SMAD1Q15797 465 aaKnown RBP11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 HNRNPA1L2Q32P51 320 aaKnown RBP11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 C9orf64Q5T6V5 341 aa11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 ZNF776Q68DI1 518 aaPredicted RBP11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 KIAA0895LQ68EN5 471 aa11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 C19orf48Q6RUI8 117 aa11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 LAYNQ6UX15 382 aa11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 MARCH9Q86YJ5 346 aa11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 KDM1BQ8NB78 822 aa11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 MDM1Q8TC05 714 aa11.06□□□□□ -0.64
CSNK1D-210ENST00000579308 SNX19Q92543 992 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms