RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 ABCG4Q9H172 646 aa11.59□□□□□ -0.55
GGA3-206ENST00000578773 RSPH9Q9H1X1 276 aaPredicted RBP11.59□□□□□ -0.55
GGA3-206ENST00000578773 SNX25Q9H3E2 840 aa11.59□□□□□ -0.55
GGA3-206ENST00000578773 CYLDQ9NQC7 956 aa11.59□□□□□ -0.55
GGA3-206ENST00000578773 ZNF71Q9NQZ8 489 aaPredicted RBP11.59□□□□□ -0.55
GGA3-206ENST00000578773 RBAKQ9NYW8 714 aaPredicted RBP11.59□□□□□ -0.55
GGA3-206ENST00000578773 TNRC6AQ8NDV7 1962 aaKnown RBP11.59□□□□□ -0.55
GGA3-206ENST00000578773 VWA3AA6NCI4 1184 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 FAM13AO94988 1023 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 TMEM191BP0C7N4 346 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 SFTPCP11686 197 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 ELAVL4P26378 380 aaKnown RBP11.58□□□□□ -0.56
GGA3-206ENST00000578773 HOXD9P28356 352 aaPredicted RBP11.58□□□□□ -0.56
GGA3-206ENST00000578773 CORO1AP31146 461 aaKnown RBP11.58□□□□□ -0.56
GGA3-206ENST00000578773 ATP5C1P36542 298 aaKnown RBP11.58□□□□□ -0.56
GGA3-206ENST00000578773 CCR5P51681 352 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 SGSHP51688 502 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 ARID5AQ03989 594 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 ZBTB16Q05516 673 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 TMEM119Q4V9L6 283 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 ZNF542PQ5EBM4 170 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 HYIQ5T013 277 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 NAPEPLDQ6IQ20 393 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 USP30Q70CQ3 517 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 B3GNT8Q7Z7M8 397 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 JAMLQ86YT9 394 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 TICAM1Q8IUC6 712 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 ARL14Q8N4G2 192 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 MFSD2AQ8NA29 543 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 GTF3C6Q969F1 213 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 MED10Q9BTT4 135 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 KRT82Q9NSB4 513 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 AGO1Q9UL18 857 aaKnown RBP11.58□□□□□ -0.56
GGA3-206ENST00000578773 NCKAP1Q9Y2A7 1128 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 UNC13CQ8NB66 2214 aa11.58□□□□□ -0.56
GGA3-206ENST00000578773 PRRC2CQ9Y520 2896 aaKnown RBP11.57□□□□□ -0.56
GGA3-206ENST00000578773 ESPL1Q14674 2120 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 CPED1A4D0V7 1026 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 LRRC72A6NJI9 287 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 SEMA7AO75326 666 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 AP1G2O75843 785 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 PIAS2O75928 621 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 AGFG2O95081 481 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 GP1BAP07359 652 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 ITGA2BP08514 1039 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 CCDC130P13994 396 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 KCNAB2Q13303 367 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 CST6Q15828 149 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 C10orf120Q5SQS8 335 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 SLFN12LQ6IEE8 588 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 EFL1Q7Z2Z2 1120 aaKnown RBP11.57□□□□□ -0.56
GGA3-206ENST00000578773 ZFAND4Q86XD8 727 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 DENND1CQ8IV53 801 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 MMAAQ8IVH4 418 aaKnown RBP11.57□□□□□ -0.56
GGA3-206ENST00000578773 WDR36Q8NI36 951 aaKnown RBP11.57□□□□□ -0.56
GGA3-206ENST00000578773 CACTINQ8WUQ7 758 aaKnown RBP11.57□□□□□ -0.56
GGA3-206ENST00000578773 HPS3Q969F9 1004 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 CBWD1Q9BRT8 395 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 PCIF1Q9H4Z3 704 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 PARVGQ9HBI0 331 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 DMAP1Q9NPF5 467 aaPredicted RBP11.57□□□□□ -0.56
GGA3-206ENST00000578773 TMPRSS4Q9NRS4 437 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 ABCB8Q9NUT2 735 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.57□□□□□ -0.56
GGA3-206ENST00000578773 KCNG1Q9UIX4 513 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 ODF2LQ9ULJ1 636 aa11.57□□□□□ -0.56
GGA3-206ENST00000578773 RP1L1Q8IWN7 2480 aaPredicted RBP11.57□□□□□ -0.56
GGA3-206ENST00000578773 K7ESM1 405 aa11.56□□□□□ -0.56
GGA3-206ENST00000578773 LATO43561 262 aa11.56□□□□□ -0.56
GGA3-206ENST00000578773 CST3P01034 146 aaPredicted RBP11.56□□□□□ -0.56
GGA3-206ENST00000578773 CD70P32970 193 aa11.56□□□□□ -0.56
GGA3-206ENST00000578773 PSMD8P48556 350 aa11.56□□□□□ -0.56
GGA3-206ENST00000578773 POLE2P56282 527 aa11.56□□□□□ -0.56
GGA3-206ENST00000578773 IRX6P78412 446 aaPredicted RBP11.56□□□□□ -0.56
GGA3-206ENST00000578773 ORC2Q13416 577 aaPredicted RBP11.56□□□□□ -0.56
GGA3-206ENST00000578773 MCM6Q14566 821 aa11.56□□□□□ -0.56
GGA3-206ENST00000578773 ME3Q16798 604 aa11.56□□□□□ -0.56
GGA3-206ENST00000578773 RBM44Q6ZP01 1051 aaKnown RBP11.56□□□□□ -0.56
GGA3-206ENST00000578773 DYMQ7RTS9 669 aa11.56□□□□□ -0.56
GGA3-206ENST00000578773 SCD5Q86SK9 330 aa11.56□□□□□ -0.56
GGA3-206ENST00000578773 FUKQ8N0W3 1084 aa11.56□□□□□ -0.56
GGA3-206ENST00000578773 OR14C36Q8NHC7 312 aa11.56□□□□□ -0.56
GGA3-206ENST00000578773 DDI1Q8WTU0 396 aa11.56□□□□□ -0.56
GGA3-206ENST00000578773 NOX5Q96PH1 765 aa11.56□□□□□ -0.56
GGA3-206ENST00000578773 FGFBP2Q9BYJ0 223 aa11.56□□□□□ -0.56
GGA3-206ENST00000578773 SMYD3Q9H7B4 428 aa11.56□□□□□ -0.56
GGA3-206ENST00000578773 TLR8Q9NR97 1041 aaKnown RBP11.56□□□□□ -0.56
GGA3-206ENST00000578773 INTS13Q9NVM9 706 aa11.56□□□□□ -0.56
GGA3-206ENST00000578773 RASAL2Q9UJF2 1139 aa11.56□□□□□ -0.56
GGA3-206ENST00000578773 CCDC187A0A096LP49 1063 aa11.55□□□□□ -0.56
GGA3-206ENST00000578773 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.55□□□□□ -0.56
GGA3-206ENST00000578773 A8MXQ7 604 aa11.55□□□□□ -0.56
GGA3-206ENST00000578773 HHLA1C9JL84 531 aa11.55□□□□□ -0.56
GGA3-206ENST00000578773 PPP1R37O75864 691 aa11.55□□□□□ -0.56
GGA3-206ENST00000578773 CLDN1O95832 211 aa11.55□□□□□ -0.56
GGA3-206ENST00000578773 KRT7P08729 469 aa11.55□□□□□ -0.56
GGA3-206ENST00000578773 GNLYP22749 145 aa11.55□□□□□ -0.56
GGA3-206ENST00000578773 SLC8A1P32418 973 aa11.55□□□□□ -0.56
GGA3-206ENST00000578773 UGT1A5P35504 534 aa11.55□□□□□ -0.56
GGA3-206ENST00000578773 PLA2G4AP47712 749 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms