RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 WDTC1Q8N5D0 677 aa16.48■□□□□ 0.23
CRLF3-203ENST00000578692 ZNF366Q8N895 744 aa16.48■□□□□ 0.23
CRLF3-203ENST00000578692 HJURPQ8NCD3 748 aaPredicted RBP16.48■□□□□ 0.23
CRLF3-203ENST00000578692 CADM4Q8NFZ8 388 aa16.48■□□□□ 0.23
CRLF3-203ENST00000578692 SHC3Q92529 594 aa16.48■□□□□ 0.23
CRLF3-203ENST00000578692 NUP58Q9BVL2 599 aa16.48■□□□□ 0.23
CRLF3-203ENST00000578692 SUSD2Q9UGT4 822 aa16.48■□□□□ 0.23
CRLF3-203ENST00000578692 SUN2Q9UH99 717 aa16.48■□□□□ 0.23
CRLF3-203ENST00000578692 CKAP5Q14008 2032 aa16.48■□□□□ 0.23
CRLF3-203ENST00000578692 TRUB2O95900 331 aaKnown RBP16.47■□□□□ 0.23
CRLF3-203ENST00000578692 MOCS2O96007 188 aaPredicted RBP16.47■□□□□ 0.23
CRLF3-203ENST00000578692 IGLV3-19P01714 112 aa16.47■□□□□ 0.23
CRLF3-203ENST00000578692 SYPP08247 313 aa16.47■□□□□ 0.23
CRLF3-203ENST00000578692 GNSP15586 552 aa16.47■□□□□ 0.23
CRLF3-203ENST00000578692 RPS24P62847 133 aaKnown RBP16.47■□□□□ 0.23
CRLF3-203ENST00000578692 PTK2Q05397 1052 aa16.47■□□□□ 0.23
CRLF3-203ENST00000578692 PDCLQ13371 301 aa16.47■□□□□ 0.23
CRLF3-203ENST00000578692 MAN2A1Q16706 1144 aa16.47■□□□□ 0.23
CRLF3-203ENST00000578692 PLEKHG6Q3KR16 790 aa16.47■□□□□ 0.23
CRLF3-203ENST00000578692 MS4A13Q5J8X5 152 aa16.47■□□□□ 0.23
CRLF3-203ENST00000578692 SMYD5Q6GMV2 418 aa16.47■□□□□ 0.23
CRLF3-203ENST00000578692 CACUL1Q86Y37 369 aa16.47■□□□□ 0.23
CRLF3-203ENST00000578692 CCDC117Q8IWD4 279 aaPredicted RBP16.47■□□□□ 0.23
CRLF3-203ENST00000578692 DNASE2BQ8WZ79 361 aa16.47■□□□□ 0.23
CRLF3-203ENST00000578692 MYEOVQ96EZ4 313 aa16.47■□□□□ 0.23
CRLF3-203ENST00000578692 LMLNQ96KR4 655 aa16.47■□□□□ 0.23
CRLF3-203ENST00000578692 PRICKLE1Q96MT3 831 aaPredicted RBP16.47■□□□□ 0.23
CRLF3-203ENST00000578692 NUCKS1Q9H1E3 243 aaKnown RBP16.47■□□□□ 0.23
CRLF3-203ENST00000578692 DNAJC12Q9UKB3 198 aa16.47■□□□□ 0.23
CRLF3-203ENST00000578692 PCDHGC3Q9UN70 934 aa16.47■□□□□ 0.23
CRLF3-203ENST00000578692 METTL12A8MUP2 240 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 MEI4A8MW99 385 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 APOEP02649 317 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 SHC2P98077 582 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 TAF5Q15542 800 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 DCAF6Q58WW2 860 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 ZC3H12AQ5D1E8 599 aaKnown RBP16.46■□□□□ 0.23
CRLF3-203ENST00000578692 DCAF12L1Q5VU92 463 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 FAM114A1Q8IWE2 563 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 CFAP52Q8N1V2 620 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 CARNMT1Q8N4J0 409 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 HDDC3Q8N4P3 179 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 MINDY1Q8N5J2 469 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 DEFB124Q8NES8 71 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 TTC17Q96AE7 1141 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 PPP1R13BQ96KQ4 1090 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 LHX5Q9H2C1 402 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 SLC32A1Q9H598 525 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 SIX2Q9NPC8 291 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 PRSS16Q9NQE7 514 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.46■□□□□ 0.23
CRLF3-203ENST00000578692 TJP2Q9UDY2 1190 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 XPO7Q9UIA9 1087 aaKnown RBP16.46■□□□□ 0.23
CRLF3-203ENST00000578692 NFE2L3Q9Y4A8 694 aa16.46■□□□□ 0.23
CRLF3-203ENST00000578692 FOXN3O00409 490 aaPredicted RBP16.45■□□□□ 0.22
CRLF3-203ENST00000578692 OPHN1O60890 802 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 IGLV3-25P01717 112 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 GLI1P08151 1106 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 PRKCSHP14314 528 aaPredicted RBP16.45■□□□□ 0.22
CRLF3-203ENST00000578692 ERCC5P28715 1186 aaPredicted RBP16.45■□□□□ 0.22
CRLF3-203ENST00000578692 KRT9P35527 623 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 ST8SIA6P61647 398 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 ZNF252P-AS1Q0IIN9 211 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 SEMA3BQ13214 749 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 EIF4EBP2Q13542 120 aaPredicted RBP16.45■□□□□ 0.22
CRLF3-203ENST00000578692 DPCR1Q3MIW9 517 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 VWA3BQ502W6 1294 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 FSCBQ5H9T9 825 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 EFHC1Q5JVL4 640 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 RAP1GAP2Q684P5 730 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 FAM124AQ86V42 546 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 PASD1Q8IV76 773 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 LGI2Q8N0V4 545 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 DEFB106AQ8N104 65 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 ATP6V0D2Q8N8Y2 350 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 BTN2A3PQ96KV6 586 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 CPXM1Q96SM3 734 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 TUBGCP2Q9BSJ2 902 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 NDST4Q9H3R1 872 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 FBRSQ9HAH7 460 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 SLC12A6Q9UHW9 1150 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 DACH1Q9UI36 760 aa16.45■□□□□ 0.22
CRLF3-203ENST00000578692 AJAP1Q9UKB5 411 aaPredicted RBP16.45■□□□□ 0.22
CRLF3-203ENST00000578692 INTS6Q9UL03 887 aaKnown RBP16.45■□□□□ 0.22
CRLF3-203ENST00000578692 CNOT1A5YKK6 2376 aaKnown RBP16.44■□□□□ 0.22
CRLF3-203ENST00000578692 A0A1B0GTW7 788 aa16.44■□□□□ 0.22
CRLF3-203ENST00000578692 UPK3BL1B0FP48 263 aa16.44■□□□□ 0.22
CRLF3-203ENST00000578692 UPK3BL2E5RIL1 263 aa16.44■□□□□ 0.22
CRLF3-203ENST00000578692 H0Y626 953 aa16.44■□□□□ 0.22
CRLF3-203ENST00000578692 LUC7L3O95232 432 aaKnown RBP16.44■□□□□ 0.22
CRLF3-203ENST00000578692 ASLP04424 464 aa16.44■□□□□ 0.22
CRLF3-203ENST00000578692 C7P10643 843 aa16.44■□□□□ 0.22
CRLF3-203ENST00000578692 TACR2P21452 398 aa16.44■□□□□ 0.22
CRLF3-203ENST00000578692 CLCN1P35523 988 aa16.44■□□□□ 0.22
CRLF3-203ENST00000578692 RPS14P62263 151 aaKnown RBP16.44■□□□□ 0.22
CRLF3-203ENST00000578692 PITX1P78337 314 aaPredicted RBP16.44■□□□□ 0.22
CRLF3-203ENST00000578692 CDK17Q00537 523 aa16.44■□□□□ 0.22
CRLF3-203ENST00000578692 ZBTB16Q05516 673 aa16.44■□□□□ 0.22
CRLF3-203ENST00000578692 CDH18Q13634 790 aa16.44■□□□□ 0.22
CRLF3-203ENST00000578692 OR2I1PQ8NGU4 316 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms