RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 ERBB2P04626 1255 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 SPIRE1Q08AE8 756 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 CCDC85BQ15834 202 aaPredicted RBP12.31□□□□□ -0.44
ERBB2-206ENST00000578373 PPM1JQ5JR12 505 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 PRAMEF19Q5SWL8 479 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 PPP1R26Q5T8A7 1209 aaPredicted RBP12.31□□□□□ -0.44
ERBB2-206ENST00000578373 GLB1LQ6UWU2 654 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.31□□□□□ -0.44
ERBB2-206ENST00000578373 CCNJLQ8IV13 435 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 MPP4Q96JB8 637 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 TBCBQ99426 244 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 ASPSCR1Q9BZE9 553 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 ASB7Q9H672 318 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 DDHD2O94830 711 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 ALBP02768 609 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 PAEPP09466 180 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 PIRTP0C851 137 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 PNPLA4P41247 253 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 CTBP1Q13363 440 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 SH3PXD2AQ5TCZ1 1133 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 GAD1Q99259 594 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 GOLGA2P5Q9HBQ8 144 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 NMRK1Q9NWW6 199 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 ACTL7BQ9Y614 415 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 BDNFP23560 247 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 AKT1P31749 480 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 SCNN1BP51168 640 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 NFYCQ13952 458 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 RNF220Q5VTB9 566 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 LPCAT4Q643R3 524 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 WSCD1Q658N2 575 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 NDNQ99608 321 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 TKTL2Q9H0I9 626 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 KCNK4Q9NYG8 393 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 CHKBQ9Y259 395 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 HNRNPLP14866 589 aaKnown RBP eCLIP12.3□□□□□ -0.44
ERBB2-206ENST00000578373 GAD2Q05329 585 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 KHDC1Q4VXA5 237 aaKnown RBP12.3□□□□□ -0.44
ERBB2-206ENST00000578373 LRRC38Q5VT99 294 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 PLEKHA7Q6IQ23 1121 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 MFSD5Q6N075 450 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 DLK2Q6UY11 383 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 C10orf107Q8IVU9 208 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 RIN3Q8TB24 985 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 XPNPEP1Q9NQW7 623 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 ITGA11Q9UKX5 1188 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 RNF112Q9ULX5 631 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 KATNA1O75449 491 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 THP07101 528 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 ABCE1P61221 599 aaKnown RBP12.3□□□□□ -0.44
ERBB2-206ENST00000578373 VSTM1Q6UX27 236 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 HS6ST3Q8IZP7 471 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 GANCQ8TET4 914 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 OPTNQ96CV9 577 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 SLC38A7Q9NVC3 462 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 GID8Q9NWU2 228 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 SLC8A2Q9UPR5 921 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 STXBP5LQ9Y2K9 1186 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 ANKRD12Q6UB98 2062 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 DISP2A7MBM2 1401 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 IGKV6D-41A0A0C4DH26 115 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 RRN3P2A6NIE6 340 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 F8W8V4 182 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 PSMD3O43242 534 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 GSSP48637 474 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 GEMP55040 296 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 BEX3Q00994 111 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 VGLL4Q14135 290 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 DMC1Q14565 340 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 KCTD21Q4G0X4 260 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 IRGCQ6NXR0 463 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 SCIMPQ6UWF3 145 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 MON1BQ7L1V2 547 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 RBM15BQ8NDT2 890 aaKnown RBP12.3□□□□□ -0.44
ERBB2-206ENST00000578373 PLEKHO2Q8TD55 490 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 FAM162AQ96A26 154 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 DSEQ9UL01 958 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 AAR2Q9Y312 384 aaKnown RBP12.3□□□□□ -0.44
ERBB2-206ENST00000578373 BAZ2AQ9UIF9 1905 aaKnown RBP12.3□□□□□ -0.44
ERBB2-206ENST00000578373 LINC00854A0A1B0GVQ3 168 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 GSC2O15499 205 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 PGAM1P18669 254 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 CDKN2BP42772 138 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 UBE3AQ05086 875 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 CDH17Q12864 832 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 LAMB3Q13751 1172 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 TBCELQ5QJ74 424 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 ZBED2Q9BTP6 218 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 RERGLQ9H628 205 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 ZNF395Q9H8N7 513 aaPredicted RBP12.3□□□□□ -0.44
ERBB2-206ENST00000578373 CDHR5Q9HBB8 845 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 NSMCE4AQ9NXX6 385 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 ZMYM2Q9UBW7 1377 aa12.3□□□□□ -0.44
ERBB2-206ENST00000578373 FAM208AQ9UK61 1670 aaKnown RBP12.29□□□□□ -0.44
ERBB2-206ENST00000578373 AP3B1O00203 1094 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 C4BPAP04003 597 aaKnown RBP12.29□□□□□ -0.44
ERBB2-206ENST00000578373 LGALS2P05162 132 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 APOA4P06727 396 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 ABHD2P08910 425 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 ME2P23368 584 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms