RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 TRMT10BQ6PF06 316 aaKnown RBP11.77□□□□□ -0.52
GGA3-205ENST00000578348 UNC5AQ6ZN44 842 aa11.77□□□□□ -0.52
GGA3-205ENST00000578348 ZCCHC23Q6ZST2 131 aa11.77□□□□□ -0.52
GGA3-205ENST00000578348 ARCQ7LC44 396 aa11.77□□□□□ -0.52
GGA3-205ENST00000578348 TMPRSS6Q8IU80 811 aa11.77□□□□□ -0.52
GGA3-205ENST00000578348 ADGRF2Q8IZF7 708 aa11.77□□□□□ -0.52
GGA3-205ENST00000578348 NDUFAF2Q8N183 169 aa11.77□□□□□ -0.52
GGA3-205ENST00000578348 CCDC33Q8N5R6 958 aa11.77□□□□□ -0.52
GGA3-205ENST00000578348 PQLC3Q8N755 202 aa11.77□□□□□ -0.52
GGA3-205ENST00000578348 ARRDC4Q8NCT1 418 aa11.77□□□□□ -0.52
GGA3-205ENST00000578348 PPFIBP2Q8ND30 876 aa11.77□□□□□ -0.52
GGA3-205ENST00000578348 KHSRPQ92945 711 aaKnown RBP eCLIP11.77□□□□□ -0.52
GGA3-205ENST00000578348 RILPQ96NA2 401 aa11.77□□□□□ -0.52
GGA3-205ENST00000578348 C20orf27Q9GZN8 174 aa11.77□□□□□ -0.52
GGA3-205ENST00000578348 WWP1Q9H0M0 922 aa11.77□□□□□ -0.52
GGA3-205ENST00000578348 ETAA1Q9NY74 926 aa11.77□□□□□ -0.52
GGA3-205ENST00000578348 SCN10AQ9Y5Y9 1956 aa11.77□□□□□ -0.52
GGA3-205ENST00000578348 TRDMT1O14717 391 aaKnown RBP11.77□□□□□ -0.53
GGA3-205ENST00000578348 RPLP2P05387 115 aaKnown RBP11.77□□□□□ -0.53
GGA3-205ENST00000578348 PDGFRBP09619 1106 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 ADORA2BP29275 332 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 PTPN9P43378 593 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 NKX3-2P78367 333 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 IRX4P78413 519 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 RBBP5Q15291 538 aaKnown RBP11.77□□□□□ -0.53
GGA3-205ENST00000578348 CA9Q16790 459 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 TEX44Q53QW1 395 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 GNASQ5JWF2 1037 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 FAM91A1Q658Y4 838 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 IRGCQ6NXR0 463 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 SLC26A9Q7LBE3 791 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 CRLF3Q8IUI8 442 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 HACE1Q8IYU2 909 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 MPP5Q8N3R9 675 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 PCDH19Q8TAB3 1148 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 FAM172AQ8WUF8 416 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 RTP4Q96DX8 246 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 CLPTM1LQ96KA5 538 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 HSFY1Q96LI6 401 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 PPP1R10Q96QC0 940 aaKnown RBP11.77□□□□□ -0.53
GGA3-205ENST00000578348 FRMD8Q9BZ67 464 aaPredicted RBP11.77□□□□□ -0.53
GGA3-205ENST00000578348 SPC25Q9HBM1 224 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 GOLGA2P5Q9HBQ8 144 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 PCDH18Q9HCL0 1135 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 SIRPGQ9P1W8 387 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.77□□□□□ -0.53
GGA3-205ENST00000578348 TLL2Q9Y6L7 1015 aa11.77□□□□□ -0.53
GGA3-205ENST00000578348 ZNF487B1APH4 448 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 PTGESO14684 152 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 MAP3K13O43283 966 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 MAP3K7O43318 606 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 CA12O43570 354 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 HCRTO43612 131 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 TGM2P21980 687 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 SP100P23497 879 aaPredicted RBP11.76□□□□□ -0.53
GGA3-205ENST00000578348 CCNFP41002 786 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 LILRA4P59901 499 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 AP1B1Q10567 949 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 LBRQ14739 615 aaKnown RBP11.76□□□□□ -0.53
GGA3-205ENST00000578348 ZRSR2Q15696 482 aaKnown RBP11.76□□□□□ -0.53
GGA3-205ENST00000578348 SCUBE3Q8IX30 993 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 CFAP61Q8NHU2 1237 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 LPIN3Q9BQK8 851 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 SNRNP25Q9BV90 132 aaKnown RBP11.76□□□□□ -0.53
GGA3-205ENST00000578348 SLC38A7Q9NVC3 462 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 BCLAF3A2AJT9 711 aaKnown RBP11.76□□□□□ -0.53
GGA3-205ENST00000578348 HMX2A2RU54 273 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 SPECC1L-ADORA2AF8WAN1 911 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 MDM4O15151 490 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 MAGEC1O60732 1142 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 SMIM24O75264 130 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 METTL18O95568 372 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 LMO2P25791 158 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 TM4SF4P48230 202 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 RAP1GDS1P52306 607 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 UBAP2LQ14157 1087 aaKnown RBP11.76□□□□□ -0.53
GGA3-205ENST00000578348 SCUBE1Q8IWY4 988 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 GSDMBQ8TAX9 411 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 DEPDC1BQ8WUY9 529 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 TRIB2Q92519 343 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 EBF4Q9BQW3 602 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 THTPAQ9BU02 230 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 PPP1R12CQ9BZL4 782 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 VCXQ9H320 206 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 CHST12Q9NRB3 414 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 ZNF212Q9UDV6 495 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 TAGLN3Q9UI15 199 aa11.76□□□□□ -0.53
GGA3-205ENST00000578348 HBS1LQ9Y450 684 aaKnown RBP11.76□□□□□ -0.53
GGA3-205ENST00000578348 EME2A4GXA9 379 aaPredicted RBP11.75□□□□□ -0.53
GGA3-205ENST00000578348 PRR5-ARHGAP8B1AHC4 643 aa11.75□□□□□ -0.53
GGA3-205ENST00000578348 F5H423 210 aaPredicted RBP11.75□□□□□ -0.53
GGA3-205ENST00000578348 XPO1O14980 1071 aaKnown RBP11.75□□□□□ -0.53
GGA3-205ENST00000578348 GRIA1P42261 906 aa11.75□□□□□ -0.53
GGA3-205ENST00000578348 ARHGAP8P85298 464 aa11.75□□□□□ -0.53
GGA3-205ENST00000578348 ZNF618Q5T7W0 954 aa11.75□□□□□ -0.53
GGA3-205ENST00000578348 SLC9A4Q6AI14 798 aa11.75□□□□□ -0.53
GGA3-205ENST00000578348 GDF6Q6KF10 455 aaPredicted RBP11.75□□□□□ -0.53
GGA3-205ENST00000578348 CXCL17Q6UXB2 119 aa11.75□□□□□ -0.53
GGA3-205ENST00000578348 RIPOR1Q6ZS17 1223 aa11.75□□□□□ -0.53
GGA3-205ENST00000578348 ZNF534Q76KX8 674 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms