RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 GNSP15586 552 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 CLCN1P35523 988 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 DAOAP59103 153 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 TPM4P67936 248 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 EFEMP1Q12805 493 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 SLC14A1Q13336 389 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 STARD3Q14849 445 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 ZNF423Q2M1K9 1284 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 FUT11Q495W5 492 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 WDR45BQ5MNZ6 344 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 SLC47A2Q86VL8 602 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 P2RY11Q96G91 374 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 CAMK1GQ96NX5 476 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 MIS12Q9H081 205 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 HSD3B7Q9H2F3 369 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 PDCL3Q9H2J4 239 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 PRDM16Q9HAZ2 1276 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 FAM207AQ9NSI2 230 aaPredicted RBP16.68■□□□□ 0.26
VAPA-204ENST00000577901 MARCH2Q9P0N8 246 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 PCDHGC3Q9UN70 934 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 CEP83Q9Y592 693 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 MYO18AQ92614 2054 aaKnown RBP16.67■□□□□ 0.26
VAPA-204ENST00000577901 YJEFN3A6XGL0 299 aa16.67■□□□□ 0.26
VAPA-204ENST00000577901 E7ENQ6 273 aa16.67■□□□□ 0.26
VAPA-204ENST00000577901 SART1O43290 800 aaKnown RBP16.67■□□□□ 0.26
VAPA-204ENST00000577901 GJB3O75712 270 aa16.67■□□□□ 0.26
VAPA-204ENST00000577901 PENKP01210 267 aaPredicted RBP16.67■□□□□ 0.26
VAPA-204ENST00000577901 KLKB1P03952 638 aa16.67■□□□□ 0.26
VAPA-204ENST00000577901 MAOBP27338 520 aa16.67■□□□□ 0.26
VAPA-204ENST00000577901 CD6P30203 668 aa16.67■□□□□ 0.26
VAPA-204ENST00000577901 RPL34P49207 117 aaKnown RBP16.67■□□□□ 0.26
VAPA-204ENST00000577901 SNX16P57768 344 aa16.67■□□□□ 0.26
VAPA-204ENST00000577901 SYCP1Q15431 976 aa16.67■□□□□ 0.26
VAPA-204ENST00000577901 TRIP6Q15654 476 aaKnown RBP16.67■□□□□ 0.26
VAPA-204ENST00000577901 FILIP1LQ4L180 1135 aa16.67■□□□□ 0.26
VAPA-204ENST00000577901 BHLHA9Q7RTU4 235 aa16.67■□□□□ 0.26
VAPA-204ENST00000577901 RAB44Q7Z6P3 723 aaPredicted RBP16.67■□□□□ 0.26
VAPA-204ENST00000577901 METTL3Q86U44 580 aaKnown RBP16.67■□□□□ 0.26
VAPA-204ENST00000577901 SCUBE3Q8IX30 993 aa16.67■□□□□ 0.26
VAPA-204ENST00000577901 NEK11Q8NG66 645 aa16.67■□□□□ 0.26
VAPA-204ENST00000577901 TOE1Q96GM8 510 aaKnown RBP16.67■□□□□ 0.26
VAPA-204ENST00000577901 NOX5Q96PH1 765 aa16.67■□□□□ 0.26
VAPA-204ENST00000577901 LHX5Q9H2C1 402 aa16.67■□□□□ 0.26
VAPA-204ENST00000577901 ZNF510Q9Y2H8 683 aa16.67■□□□□ 0.26
VAPA-204ENST00000577901 SLC27A6Q9Y2P4 619 aa16.67■□□□□ 0.26
VAPA-204ENST00000577901 FAM208BQ5VWN6 2430 aa16.67■□□□□ 0.26
VAPA-204ENST00000577901 LAMA5O15230 3695 aa16.67■□□□□ 0.26
VAPA-204ENST00000577901 F8VZ95 297 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 NPC1O15118 1278 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 GABBR2O75899 941 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 HMBSP08397 361 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 PNMA6AP0CW24 399 aaPredicted RBP16.66■□□□□ 0.26
VAPA-204ENST00000577901 ATP1A3P13637 1013 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 CHKAP35790 457 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 KLK7P49862 253 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 POLR2FP61218 127 aaKnown RBP16.66■□□□□ 0.26
VAPA-204ENST00000577901 GRIK2Q13002 908 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 GEN1Q17RS7 908 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 ZSCAN23Q3MJ62 389 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 FYB2Q5VWT5 728 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 TMEM110Q86TL2 294 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 EDEM1Q92611 657 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 SPAG5Q96R06 1193 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 TRIM62Q9BVG3 475 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 SLC4A5Q9BY07 1137 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 DCLK3Q9C098 648 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 ZDHHC5Q9C0B5 715 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 GANQ9H2C0 597 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 ITM2CQ9NQX7 267 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 USP36Q9P275 1121 aaKnown RBP16.66■□□□□ 0.26
VAPA-204ENST00000577901 THAP10Q9P2Z0 257 aaPredicted RBP16.66■□□□□ 0.26
VAPA-204ENST00000577901 SIK3Q9Y2K2 1263 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 PCDHB9Q9Y5E1 797 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 PI4KAP42356 2102 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 NBEAQ8NFP9 2946 aa16.66■□□□□ 0.26
VAPA-204ENST00000577901 SLC12A8A0AV02 714 aa16.65■□□□□ 0.26
VAPA-204ENST00000577901 MEI4A8MW99 385 aa16.65■□□□□ 0.26
VAPA-204ENST00000577901 NCAM1P13591 858 aa16.65■□□□□ 0.26
VAPA-204ENST00000577901 HOXB3P14651 431 aaPredicted RBP16.65■□□□□ 0.26
VAPA-204ENST00000577901 CYP11B1P15538 503 aa16.65■□□□□ 0.26
VAPA-204ENST00000577901 CORO1AP31146 461 aaKnown RBP16.65■□□□□ 0.26
VAPA-204ENST00000577901 IL12RB1P42701 662 aa16.65■□□□□ 0.26
VAPA-204ENST00000577901 RING1Q06587 406 aa16.65■□□□□ 0.26
VAPA-204ENST00000577901 PDCLQ13371 301 aa16.65■□□□□ 0.26
VAPA-204ENST00000577901 ENPP2Q13822 863 aa16.65■□□□□ 0.26
VAPA-204ENST00000577901 IQCB1Q15051 598 aa16.65■□□□□ 0.26
VAPA-204ENST00000577901 APTXQ7Z2E3 356 aaKnown RBP16.65■□□□□ 0.26
VAPA-204ENST00000577901 PASD1Q8IV76 773 aa16.65■□□□□ 0.26
VAPA-204ENST00000577901 NAXDQ8IW45 347 aa16.65■□□□□ 0.26
VAPA-204ENST00000577901 CADM4Q8NFZ8 388 aa16.65■□□□□ 0.26
VAPA-204ENST00000577901 DNASE2BQ8WZ79 361 aa16.65■□□□□ 0.26
VAPA-204ENST00000577901 PPP1R13BQ96KQ4 1090 aa16.65■□□□□ 0.26
VAPA-204ENST00000577901 ERGIC2Q96RQ1 377 aa16.65■□□□□ 0.26
VAPA-204ENST00000577901 GPR174Q9BXC1 333 aa16.65■□□□□ 0.26
VAPA-204ENST00000577901 MKRN2Q9H000 416 aaKnown RBP16.65■□□□□ 0.26
VAPA-204ENST00000577901 WSB2Q9NYS7 404 aaPredicted RBP16.65■□□□□ 0.26
VAPA-204ENST00000577901 DSPP15924 2871 aaKnown RBP16.65■□□□□ 0.26
VAPA-204ENST00000577901 GON4LQ3T8J9 2241 aa16.64■□□□□ 0.25
VAPA-204ENST00000577901 A0A1B0GTW7 788 aa16.64■□□□□ 0.25
VAPA-204ENST00000577901 E5RJQ4 531 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms