RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 CHSY1Q86X52 802 aa13.13□□□□□ -0.31
MKS1-206ENST00000577824 VSIG1Q86XK7 387 aa13.13□□□□□ -0.31
MKS1-206ENST00000577824 MYEOVQ96EZ4 313 aa13.13□□□□□ -0.31
MKS1-206ENST00000577824 NECAB3Q96P71 396 aaPredicted RBP13.13□□□□□ -0.31
MKS1-206ENST00000577824 PPARGC1AQ9UBK2 798 aaKnown RBP13.13□□□□□ -0.31
MKS1-206ENST00000577824 FBXO10Q9UK96 956 aa13.13□□□□□ -0.31
MKS1-206ENST00000577824 ALG6Q9Y672 507 aa13.13□□□□□ -0.31
MKS1-206ENST00000577824 GOLGA6L7A0A1B0GV03 622 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 A0A1B0GVM2 712 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 TCAF2A6NFQ2 919 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 DRGXA6NNA5 263 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 ZNF487B1APH4 448 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 E9PAM4 449 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 F5H5T6 163 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 MOCS3O95396 460 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 KRT7P08729 469 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 RARAP10276 462 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 COMTP21964 271 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 HOXD9P28356 352 aaPredicted RBP13.12□□□□□ -0.31
MKS1-206ENST00000577824 SGSHP51688 502 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 ARSEP51690 589 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 VCPP55072 806 aaKnown RBP13.12□□□□□ -0.31
MKS1-206ENST00000577824 GAD2Q05329 585 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 RABGAP1LQ5R372 815 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 SCYL2Q6P3W7 929 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 RFWD3Q6PCD5 774 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 C1orf228Q6PIY5 440 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 TMEM25Q86YD3 366 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 RHOT1Q8IXI2 618 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 SYCE1Q8N0S2 351 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 HJURPQ8NCD3 748 aaPredicted RBP13.12□□□□□ -0.31
MKS1-206ENST00000577824 TTC16Q8NEE8 873 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 C8orf33Q9H7E9 229 aaPredicted RBP13.12□□□□□ -0.31
MKS1-206ENST00000577824 LZTFL1Q9NQ48 299 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 GTSE1Q9NYZ3 720 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 RCOR3Q9P2K3 495 aaPredicted RBP13.12□□□□□ -0.31
MKS1-206ENST00000577824 ZNF212Q9UDV6 495 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 OR12D3Q9UGF7 316 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 PCSK1NQ9UHG2 260 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 MUTYHQ9UIF7 546 aa13.12□□□□□ -0.31
MKS1-206ENST00000577824 GOLGA6L9A6NEM1 432 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 SHISA7A6NL88 538 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 FAM72CH0Y354 149 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 SPOPO43791 374 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 PALMO75781 387 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 LRIG2O94898 1065 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 CYBBP04839 570 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 CTHP32929 405 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 GJA4P35212 333 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 CTNNA1P35221 906 aaKnown RBP13.11□□□□□ -0.31
MKS1-206ENST00000577824 GGCXP38435 758 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 NR1H3Q13133 447 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 CA9Q16790 459 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 FAM72AQ5TYM5 149 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 FAM72DQ6L9T8 149 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 CHST9Q7L1S5 443 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 C14orf80Q86SX3 495 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 NT5DC3Q86UY8 548 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 NLRP14Q86W24 1093 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 RALGPS2Q86X27 583 aaPredicted RBP13.11□□□□□ -0.31
MKS1-206ENST00000577824 FAM72BQ86X60 149 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 LGI2Q8N0V4 545 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 CCAR2Q8N163 923 aaKnown RBP13.11□□□□□ -0.31
MKS1-206ENST00000577824 PYROXD2Q8N2H3 581 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 ZNF557Q8N988 423 aaPredicted RBP13.11□□□□□ -0.31
MKS1-206ENST00000577824 TRIM58Q8NG06 486 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 KIAA1524Q8TCG1 905 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 CSGALNACT1Q8TDX6 532 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 TSC1Q92574 1164 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 IGSF8Q969P0 613 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 FAF2Q96CS3 445 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 KCTD15Q96SI1 283 aaPredicted RBP13.11□□□□□ -0.31
MKS1-206ENST00000577824 EPAS1Q99814 870 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 SLC2A11Q9BYW1 496 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 GOLPH3Q9H4A6 298 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.11□□□□□ -0.31
MKS1-206ENST00000577824 WNT16Q9UBV4 365 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 VANGL2Q9ULK5 521 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 GUCA1BQ9UMX6 200 aa13.11□□□□□ -0.31
MKS1-206ENST00000577824 TTC28Q96AY4 2481 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 CCDC66A2RUB6 948 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 TYW5A2RUC4 315 aaKnown RBP13.1□□□□□ -0.31
MKS1-206ENST00000577824 TMEM110-MUSTN1A8MSY1 372 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 WASH4PA8MWX3 477 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 NEDD8-MDP1E9PL57 170 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 FGF10O15520 208 aaPredicted RBP13.1□□□□□ -0.31
MKS1-206ENST00000577824 CLDN11O75508 207 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 TYRP14679 529 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 CTNNA2P26232 953 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 OPRD1P41143 372 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 HCAR3P49019 387 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 CDH4P55283 916 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 PRKCQQ04759 706 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 PDK2Q15119 407 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 SMTNL2Q2TAL5 461 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 KCNT1Q5JUK3 1230 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 LRRC31Q6UY01 552 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 TPGS1Q6ZTW0 290 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 C12orf40Q86WS4 652 aa13.1□□□□□ -0.31
MKS1-206ENST00000577824 SUGP1Q8IWZ8 645 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms