RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 TRIM49P0CI25 452 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 TRIM49CP0CI26 452 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 CHMP24386 653 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 RPA1P27694 616 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 ZNF177Q13360 481 aaPredicted RBP9.04□□□□□ -0.96
CDH8-203ENST00000577390 TNNI3KQ59H18 835 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 RAP1GAP2Q684P5 730 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 ATG9AQ7Z3C6 839 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 DHDDSQ86SQ9 333 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 USP13Q92995 863 aaPredicted RBP9.04□□□□□ -0.96
CDH8-203ENST00000577390 C12orf4Q9NQ89 552 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 POTECB2RU33 542 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 ANXA5P08758 320 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 CYP2B6P20813 491 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 MSX1P28360 303 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 TGFBR2P37173 567 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 ZNF423Q2M1K9 1284 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 LYSMD3Q7Z3D4 306 aa9.04□□□□□ -0.96
CDH8-203ENST00000577390 IL1AP01583 271 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 TFPIP10646 304 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 PABPC1P11940 636 aaKnown RBP9.03□□□□□ -0.96
CDH8-203ENST00000577390 HOXA7P31268 230 aaPredicted RBP9.03□□□□□ -0.96
CDH8-203ENST00000577390 PSME3P61289 254 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 GALNT3Q14435 633 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 RNF43Q68DV7 783 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 HDDC3Q8N4P3 179 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 ZNF655Q8N720 491 aaPredicted RBP9.03□□□□□ -0.96
CDH8-203ENST00000577390 SERPINB12Q96P63 405 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 DCUN1D5Q9BTE7 237 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 MOCS1Q9NZB8 636 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 S100A6P06703 90 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 GSSP48637 474 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 KCNK10P57789 538 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 ASPRV1Q53RT3 343 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 BHLHB9Q6PI77 547 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 DGLUCYQ7Z3D6 616 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 CCNJLQ8IV13 435 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 TCAIMQ8N3R3 496 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 PCYOX1LQ8NBM8 494 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 HPS1Q92902 700 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 MRPL4Q9BYD3 311 aaKnown RBP9.03□□□□□ -0.96
CDH8-203ENST00000577390 RNF38Q9H0F5 515 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 LRRC4BQ9NT99 713 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 BNIP1Q12981 228 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 GOLM1Q8NBJ4 401 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 SLC20A1Q8WUM9 679 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 ZNF285Q96NJ3 590 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 SNX13Q9Y5W8 968 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 A0A088AWK7 358 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 FAM220BPB1ANY3 271 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 RARAP10276 462 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 ZNF10P21506 573 aaPredicted RBP9.03□□□□□ -0.96
CDH8-203ENST00000577390 PTSQ03393 145 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 MTAPQ13126 283 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 KCTD8Q6ZWB6 473 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 P4HA3Q7Z4N8 544 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 MINDY2Q8NBR6 621 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 RADILQ96JH8 1075 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 FOXP1Q9H334 677 aaPredicted RBP9.03□□□□□ -0.96
CDH8-203ENST00000577390 NAGPAQ9UK23 515 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 PDE4DIPQ5VU43 2346 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 ATF4P18848 351 aaPredicted RBP9.03□□□□□ -0.96
CDH8-203ENST00000577390 FXR1P51114 621 aaKnown RBP eCLIP9.03□□□□□ -0.96
CDH8-203ENST00000577390 BCAR1P56945 870 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 ADAM17P78536 824 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 GNASQ5JWF2 1037 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 MTDHQ86UE4 582 aaKnown RBP9.03□□□□□ -0.96
CDH8-203ENST00000577390 GRPEL2Q8TAA5 225 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 GLT1D1Q96MS3 346 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 CLEC4AQ9UMR7 237 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 CYB5AP00167 134 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 FAM153BP0C7A2 387 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 LRPAP1P30533 357 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 NFKB2Q00653 900 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 CENPCQ03188 943 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 NECTIN1Q15223 517 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 LRRC41Q15345 812 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 ZNHIT3Q15649 155 aaPredicted RBP9.03□□□□□ -0.96
CDH8-203ENST00000577390 PKN1Q16512 942 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 FAM153CQ494X1 144 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 USPL1Q5W0Q7 1092 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 ADGRG2Q8IZP9 1017 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 SNF8Q96H20 258 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 FAM213AQ9BRX8 229 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 ADAM7Q9H2U9 754 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 TRMT6Q9UJA5 497 aaKnown RBP9.03□□□□□ -0.96
CDH8-203ENST00000577390 OR10H1Q9Y4A9 318 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 KANSL1LA0AUZ9 987 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 FAM92AA1XBS5 289 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 PLEKHA8P1O95397 391 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 OXSR1O95747 527 aaPredicted RBP9.03□□□□□ -0.96
CDH8-203ENST00000577390 ZNF682O95780 498 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 DNASE1L1P49184 302 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 GFPT1Q06210 699 aaPredicted RBP9.03□□□□□ -0.96
CDH8-203ENST00000577390 EIF4A2Q14240 407 aaKnown RBP9.03□□□□□ -0.96
CDH8-203ENST00000577390 MAN2A1Q16706 1144 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 KRT24Q2M2I5 525 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 WDR45BQ5MNZ6 344 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 RSBN1Q5VWQ0 802 aaPredicted RBP9.03□□□□□ -0.96
CDH8-203ENST00000577390 GALNT4Q8N4A0 578 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms