RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 IGLV3-27P01718 113 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 WNT1P04628 370 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 IGHV4-34P06331 123 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 VAV1P15498 845 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 BMP6P22004 513 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 MATKP42679 507 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 APBA1Q02410 837 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 ENPEPQ07075 957 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 ZNF423Q2M1K9 1284 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 PIK3R6Q5UE93 754 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 CCNI2Q6ZMN8 369 aaPredicted RBP12.52□□□□□ -0.41
PRPF8-215ENST00000576958 CIR1Q86X95 450 aaPredicted RBP12.52□□□□□ -0.41
PRPF8-215ENST00000576958 DHX40Q8IX18 779 aaKnown RBP12.52□□□□□ -0.41
PRPF8-215ENST00000576958 SIX6OS1Q8N1H7 587 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 ARHGAP18Q8N392 663 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 ENGASEQ8NFI3 743 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 CADM4Q8NFZ8 388 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 LMO3Q8TAP4 145 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 RNF139Q8WU17 664 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 SLC35F5Q8WV83 523 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 CCDC47Q96A33 483 aaKnown RBP12.52□□□□□ -0.41
PRPF8-215ENST00000576958 FCRL2Q96LA5 508 aaPredicted RBP12.52□□□□□ -0.41
PRPF8-215ENST00000576958 MRGPRX3Q96LB0 322 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 CDK5RAP1Q96SZ6 601 aaKnown RBP12.52□□□□□ -0.41
PRPF8-215ENST00000576958 NUP58Q9BVL2 599 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 NUCKS1Q9H1E3 243 aaKnown RBP12.52□□□□□ -0.41
PRPF8-215ENST00000576958 SUSD2Q9UGT4 822 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 CYTH4Q9UIA0 394 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 NAALADL1Q9UQQ1 740 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 GPSM3Q9Y4H4 160 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 PCDHB4Q9Y5E5 795 aa12.52□□□□□ -0.41
PRPF8-215ENST00000576958 NYNRINQ9P2P1 1898 aaKnown RBP12.52□□□□□ -0.41
PRPF8-215ENST00000576958 FASNP49327 2511 aaKnown RBP12.52□□□□□ -0.41
PRPF8-215ENST00000576958 TTC34A8MYJ7 566 aa12.51□□□□□ -0.41
PRPF8-215ENST00000576958 SIN3BO75182 1162 aa12.51□□□□□ -0.41
PRPF8-215ENST00000576958 SEMA4FO95754 770 aa12.51□□□□□ -0.41
PRPF8-215ENST00000576958 VDRP11473 427 aa12.51□□□□□ -0.41
PRPF8-215ENST00000576958 TRIM21P19474 475 aaKnown RBP12.51□□□□□ -0.41
PRPF8-215ENST00000576958 FMO5P49326 533 aa12.51□□□□□ -0.41
PRPF8-215ENST00000576958 HARS2P49590 506 aaKnown RBP12.51□□□□□ -0.41
PRPF8-215ENST00000576958 ARID5AQ03989 594 aa12.51□□□□□ -0.41
PRPF8-215ENST00000576958 SLC14A1Q13336 389 aa12.51□□□□□ -0.41
PRPF8-215ENST00000576958 EIF4HQ15056 248 aaKnown RBP12.51□□□□□ -0.41
PRPF8-215ENST00000576958 COL28A1Q2UY09 1125 aa12.51□□□□□ -0.41
PRPF8-215ENST00000576958 ADGRF1Q5T601 910 aa12.51□□□□□ -0.41
PRPF8-215ENST00000576958 ZNF658Q5TYW1 1059 aaPredicted RBP12.51□□□□□ -0.41
PRPF8-215ENST00000576958 SYPL2Q5VXT5 272 aa12.51□□□□□ -0.41
PRPF8-215ENST00000576958 DENND1BQ6P3S1 775 aa12.51□□□□□ -0.41
PRPF8-215ENST00000576958 LCLAT1Q6UWP7 414 aa12.51□□□□□ -0.41
PRPF8-215ENST00000576958 GATAD2AQ86YP4 633 aa12.51□□□□□ -0.41
PRPF8-215ENST00000576958 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.51□□□□□ -0.41
PRPF8-215ENST00000576958 HNRNPLLQ8WVV9 542 aaKnown RBP12.51□□□□□ -0.41
PRPF8-215ENST00000576958 KCTD13Q8WZ19 329 aa12.51□□□□□ -0.41
PRPF8-215ENST00000576958 KREMEN1Q96MU8 473 aa12.51□□□□□ -0.41
PRPF8-215ENST00000576958 SLC6A18Q96N87 628 aa12.51□□□□□ -0.41
PRPF8-215ENST00000576958 SLC2A11Q9BYW1 496 aa12.51□□□□□ -0.41
PRPF8-215ENST00000576958 HESX1Q9UBX0 185 aa12.51□□□□□ -0.41
PRPF8-215ENST00000576958 ANKRD6Q9Y2G4 727 aa12.51□□□□□ -0.41
PRPF8-215ENST00000576958 HBS1LQ9Y450 684 aaKnown RBP12.51□□□□□ -0.41
PRPF8-215ENST00000576958 DOCK9Q9BZ29 2069 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 GOLGA4Q13439 2230 aaKnown RBP12.5□□□□□ -0.41
PRPF8-215ENST00000576958 H0Y626 953 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 SLC16A3O15427 465 aaKnown RBP12.5□□□□□ -0.41
PRPF8-215ENST00000576958 ACSL4O60488 711 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 TRIM16O95361 564 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 MOCS2O96007 188 aaPredicted RBP12.5□□□□□ -0.41
PRPF8-215ENST00000576958 LTFP02788 710 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 CSKP41240 450 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 STK19P49842 368 aaPredicted RBP12.5□□□□□ -0.41
PRPF8-215ENST00000576958 IRAK1P51617 712 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 TBX4P57082 545 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 KCNJ12Q14500 433 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 SHBQ15464 509 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 TAF5Q15542 800 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 MSANTD2Q6P1R3 559 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 GJB7Q6PEY0 223 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 DBX2Q6ZNG2 339 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 TAC4Q86UU9 113 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 SCUBE3Q8IX30 993 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 APCDD1Q8J025 514 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 CARNMT1Q8N4J0 409 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 DQX1Q8TE96 717 aaKnown RBP12.5□□□□□ -0.41
PRPF8-215ENST00000576958 RHBDD1Q8TEB9 315 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 BBC3Q96PG8 261 aaPredicted RBP12.5□□□□□ -0.41
PRPF8-215ENST00000576958 ABCC13Q9NSE7 274 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 OLA1Q9NTK5 396 aaKnown RBP12.5□□□□□ -0.41
PRPF8-215ENST00000576958 SLCO3A1Q9UIG8 710 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 MAN1B1Q9UKM7 699 aa12.5□□□□□ -0.41
PRPF8-215ENST00000576958 A0A1W2PP55 124 aa12.49□□□□□ -0.41
PRPF8-215ENST00000576958 MID1O15344 667 aa12.49□□□□□ -0.41
PRPF8-215ENST00000576958 DKK1O94907 266 aa12.49□□□□□ -0.41
PRPF8-215ENST00000576958 CER1O95813 267 aa12.49□□□□□ -0.41
PRPF8-215ENST00000576958 DLDP09622 509 aaKnown RBP12.49□□□□□ -0.41
PRPF8-215ENST00000576958 SETSIPP0DME0 302 aa12.49□□□□□ -0.41
PRPF8-215ENST00000576958 OXTRP30559 389 aa12.49□□□□□ -0.41
PRPF8-215ENST00000576958 GGCXP38435 758 aa12.49□□□□□ -0.41
PRPF8-215ENST00000576958 STX17P56962 302 aa12.49□□□□□ -0.41
PRPF8-215ENST00000576958 KLHL10Q6JEL2 608 aa12.49□□□□□ -0.41
PRPF8-215ENST00000576958 GLRX5Q86SX6 157 aa12.49□□□□□ -0.41
PRPF8-215ENST00000576958 MMAAQ8IVH4 418 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms