RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 WDCPQ9H6R7 721 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 ELOVL2Q9NXB9 296 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 CACNA2D2Q9NY47 1150 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 GGA2Q9UJY4 613 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 SMG5Q9UPR3 1016 aaKnown RBP21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 RIF1Q5UIP0 2472 aaKnown RBP21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 VPS13AQ96RL7 3174 aa21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 HRO43593 1189 aa21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 GJB6O95452 261 aa21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 PABPC1P11940 636 aaKnown RBP21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 GSCP56915 257 aaPredicted RBP21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 KLHL30Q0D2K2 578 aa21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 CDH18Q13634 790 aa21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 EIF4HQ15056 248 aaKnown RBP21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 BRMS1LQ5PSV4 323 aa21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 RNF43Q68DV7 783 aa21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 CEP68Q76N32 757 aa21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 MON1BQ7L1V2 547 aa21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 WFIKKN2Q8TEU8 576 aa21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 SYT11Q9BT88 431 aa21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 SELENOOQ9BVL4 669 aa21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 TKTL2Q9H0I9 626 aa21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 EBF1Q9UH73 591 aa21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 RAB23Q9ULC3 237 aa21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 PAXBP1Q9Y5B6 917 aa21.43■■□□□ 1.02
HCFC1R1-208ENST00000575214 A0A1W2PQJ5 194 aa21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 TCRBV21S2A2A0A5A6 115 aa21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 ADCY5O95622 1261 aa21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 KRT3P12035 628 aa21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 PRKCIP41743 596 aa21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 CXCR3P49682 368 aa21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 ATXN1P54253 815 aaKnown RBP21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 ATP11AP98196 1134 aa21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 C1QBPQ07021 282 aaKnown RBP21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 SIM2Q14190 667 aaPredicted RBP21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 RABGAP1LQ5R372 815 aa21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 TMEM215Q68D42 235 aa21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 ACAD10Q6JQN1 1059 aa21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 CHST9Q7L1S5 443 aa21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 AHI1Q8N157 1196 aa21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 SUMF1Q8NBK3 374 aa21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 C3orf20Q8ND61 904 aa21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 MDGA1Q8NFP4 955 aa21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 CPLX3Q8WVH0 158 aa21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 IQCDQ96DY2 449 aa21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 PRMT1Q99873 361 aaKnown RBP21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 TPSD1Q9BZJ3 242 aa21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 TMEM51Q9NW97 253 aa21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 BCCIPQ9P287 314 aaKnown RBP eCLIP21.42■■□□□ 1.02
HCFC1R1-208ENST00000575214 TMCO5BA8MYB1 307 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 CBFA2T2O43439 604 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 TIMM44O43615 452 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 PAGE1O75459 146 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 RPP40O75818 363 aaKnown RBP21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 LUC7L3O95232 432 aaKnown RBP21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 SKILP12757 684 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 PDGFRAP16234 1089 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 SDC4P31431 198 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 CD70P32970 193 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 RDXP35241 583 aaKnown RBP21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 GGCXP38435 758 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 E2F5Q15329 346 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 LPAL2Q16609 132 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 CDO1Q16878 200 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 PPP1R2P3Q6NXS1 205 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 DNAJC24Q6P3W2 148 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 ZNF571Q7Z3V5 609 aaPredicted RBP21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 JOSD2Q8TAC2 188 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 FIBINQ8TAL6 211 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 HMGB4Q8WW32 186 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 GAB3Q8WWW8 586 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 RXFP2Q8WXD0 754 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 SORCS1Q8WY21 1168 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 ERLEC1Q96DZ1 483 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 RPRD1AQ96P16 312 aaPredicted RBP21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 GABRG3Q99928 467 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 HINFPQ9BQA5 517 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 SIK2Q9H0K1 926 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 ARHGEF38Q9NXL2 777 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 TAS2R14Q9NYV8 317 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 THAP10Q9P2Z0 257 aaPredicted RBP21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 HS3ST4Q9Y661 456 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 STON1Q9Y6Q2 735 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 DMDP11532 3685 aa21.41■■□□□ 1.02
HCFC1R1-208ENST00000575214 C2CD4BA6NLJ0 364 aa21.4■■□□□ 1.02
HCFC1R1-208ENST00000575214 WASH3PC4AMC7 463 aa21.4■■□□□ 1.02
HCFC1R1-208ENST00000575214 H0Y626 953 aa21.4■■□□□ 1.02
HCFC1R1-208ENST00000575214 NPC1O15118 1278 aa21.4■■□□□ 1.02
HCFC1R1-208ENST00000575214 LMAN2Q12907 356 aa21.4■■□□□ 1.02
HCFC1R1-208ENST00000575214 AUHQ13825 339 aaKnown RBP21.4■■□□□ 1.02
HCFC1R1-208ENST00000575214 TDRD12Q587J7 1177 aaKnown RBP21.4■■□□□ 1.02
HCFC1R1-208ENST00000575214 TTC39BQ5VTQ0 682 aaPredicted RBP21.4■■□□□ 1.02
HCFC1R1-208ENST00000575214 FBXL22Q6P050 247 aa21.4■■□□□ 1.02
HCFC1R1-208ENST00000575214 RASSF3Q86WH2 238 aa21.4■■□□□ 1.02
HCFC1R1-208ENST00000575214 CIR1Q86X95 450 aaPredicted RBP21.4■■□□□ 1.02
HCFC1R1-208ENST00000575214 MCOLN2Q8IZK6 566 aa21.4■■□□□ 1.02
HCFC1R1-208ENST00000575214 PGBD3Q8N328 593 aa21.4■■□□□ 1.02
HCFC1R1-208ENST00000575214 OLIG1Q8TAK6 271 aa21.4■■□□□ 1.02
HCFC1R1-208ENST00000575214 VANGL2Q9ULK5 521 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms