RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 PEPDP12955 493 aa5.4□□□□□ -1.54
CDC27-216ENST00000574304 RPL15P61313 204 aaKnown RBP5.4□□□□□ -1.54
CDC27-216ENST00000574304 MTX1Q13505 466 aa5.4□□□□□ -1.54
CDC27-216ENST00000574304 PUM3Q15397 648 aaKnown RBP5.4□□□□□ -1.54
CDC27-216ENST00000574304 BTBD16Q32M84 506 aa5.4□□□□□ -1.54
CDC27-216ENST00000574304 ZACNQ401N2 412 aa5.4□□□□□ -1.54
CDC27-216ENST00000574304 ZNF569Q5MCW4 686 aa5.4□□□□□ -1.54
CDC27-216ENST00000574304 LIPMQ5VYY2 423 aa5.4□□□□□ -1.54
CDC27-216ENST00000574304 C1orf228Q6PIY5 440 aa5.4□□□□□ -1.54
CDC27-216ENST00000574304 ARFGAP1Q8N6T3 406 aa5.4□□□□□ -1.54
CDC27-216ENST00000574304 ARL14EPQ8N8R7 260 aaPredicted RBP5.4□□□□□ -1.54
CDC27-216ENST00000574304 Q8N9P0 234 aaPredicted RBP5.4□□□□□ -1.54
CDC27-216ENST00000574304 ADPRHL1Q8NDY3 354 aa5.4□□□□□ -1.54
CDC27-216ENST00000574304 RSC1A1Q92681 617 aa5.4□□□□□ -1.54
CDC27-216ENST00000574304 SLC39A13Q96H72 371 aa5.4□□□□□ -1.54
CDC27-216ENST00000574304 TUBB6Q9BUF5 446 aa5.4□□□□□ -1.54
CDC27-216ENST00000574304 MECRQ9BV79 373 aa5.4□□□□□ -1.54
CDC27-216ENST00000574304 FOXP1Q9H334 677 aaPredicted RBP5.4□□□□□ -1.54
CDC27-216ENST00000574304 PLCB1Q9NQ66 1216 aa5.4□□□□□ -1.54
CDC27-216ENST00000574304 PAPOLBQ9NRJ5 636 aaKnown RBP5.4□□□□□ -1.54
CDC27-216ENST00000574304 IPO11Q9UI26 975 aaKnown RBP5.4□□□□□ -1.54
CDC27-216ENST00000574304 RAB21Q9UL25 225 aa5.4□□□□□ -1.54
CDC27-216ENST00000574304 TRPC5Q9UL62 973 aaPredicted RBP5.4□□□□□ -1.54
CDC27-216ENST00000574304 SLC12A4Q9UP95 1085 aa5.4□□□□□ -1.54
CDC27-216ENST00000574304 DAAM1Q9Y4D1 1078 aa5.4□□□□□ -1.54
CDC27-216ENST00000574304 TTBK1Q5TCY1 1321 aaPredicted RBP5.4□□□□□ -1.55
CDC27-216ENST00000574304 C3orf70A6NLC5 250 aaPredicted RBP5.39□□□□□ -1.55
CDC27-216ENST00000574304 CNTN5O94779 1100 aa5.39□□□□□ -1.55
CDC27-216ENST00000574304 PDIA3P30101 505 aaKnown RBP5.39□□□□□ -1.55
CDC27-216ENST00000574304 GRK5P34947 590 aa5.39□□□□□ -1.55
CDC27-216ENST00000574304 ME1P48163 572 aa5.39□□□□□ -1.55
CDC27-216ENST00000574304 FOXL2P58012 376 aa5.39□□□□□ -1.55
CDC27-216ENST00000574304 FAM3BP58499 235 aaPredicted RBP5.39□□□□□ -1.55
CDC27-216ENST00000574304 SHC2P98077 582 aa5.39□□□□□ -1.55
CDC27-216ENST00000574304 B4GALNT1Q00973 533 aa5.39□□□□□ -1.55
CDC27-216ENST00000574304 ICA1Q05084 483 aa5.39□□□□□ -1.55
CDC27-216ENST00000574304 GALNT1Q10472 559 aaPredicted RBP5.39□□□□□ -1.55
CDC27-216ENST00000574304 SF3A3Q12874 501 aaKnown RBP eCLIP5.39□□□□□ -1.551e-6■■■■□ 20.6
CDC27-216ENST00000574304 ADGRF3Q8IZF5 1079 aa5.39□□□□□ -1.55
CDC27-216ENST00000574304 SAMD3Q8N6K7 520 aa5.39□□□□□ -1.55
CDC27-216ENST00000574304 FAM47BQ8NA70 645 aa5.39□□□□□ -1.55
CDC27-216ENST00000574304 OR1N1Q8NGS0 311 aa5.39□□□□□ -1.55
CDC27-216ENST00000574304 EID2BQ96D98 161 aa5.39□□□□□ -1.55
CDC27-216ENST00000574304 MPHOSPH6Q99547 160 aaKnown RBP5.39□□□□□ -1.55
CDC27-216ENST00000574304 KATNAL1Q9BW62 490 aa5.39□□□□□ -1.55
CDC27-216ENST00000574304 SFXN1Q9H9B4 322 aa5.39□□□□□ -1.55
CDC27-216ENST00000574304 CNTN6Q9UQ52 1028 aa5.39□□□□□ -1.55
CDC27-216ENST00000574304 HS3ST3B1Q9Y662 390 aa5.39□□□□□ -1.55
CDC27-216ENST00000574304 TBC1D3DA0A087WVF3 549 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 TBC1D3IA0A087WXS9 549 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 TBC1D3EA0A087X179 549 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 TBC1D3KA0A087X1G2 549 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 TBC1D3BA6NDS4 549 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 FAM90A18PA6NE21 464 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 TBC1D3FA6NER0 549 aaPredicted RBP5.38□□□□□ -1.55
CDC27-216ENST00000574304 FAM90A16PA6NEW6 464 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 FAM90A9PA6NNJ1 464 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 FAM90A5PA8MXJ8 464 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 TBC1D3LB9A6J9 549 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 SYT5O00445 386 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 LARGE1O95461 756 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 ITGA2BP08514 1039 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 CYP3A4P08684 503 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 FAM90A15PP0C7V4 464 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 FAM90A14PP0C7W9 464 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 TBC1D3HP0C7X1 549 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 GYS1P13807 737 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 IGFBP2P18065 325 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 TGM2P21980 687 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 RBM6P78332 1123 aaKnown RBP5.38□□□□□ -1.55
CDC27-216ENST00000574304 PGM5Q15124 567 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 TRIM60Q495X7 471 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 ATPAF1Q5TC12 328 aaPredicted RBP5.38□□□□□ -1.55
CDC27-216ENST00000574304 TBC1D3GQ6DHY5 549 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 TBC1D3CQ6IPX1 549 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 IRF2BP2Q7Z5L9 587 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 TBC1D3Q8IZP1 549 aaPredicted RBP5.38□□□□□ -1.55
CDC27-216ENST00000574304 SPICE1Q8N0Z3 855 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 ATG16L2Q8NAA4 619 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 ZNF548Q8NEK5 533 aaPredicted RBP5.38□□□□□ -1.55
CDC27-216ENST00000574304 OR52N4Q8NGI2 321 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 MPLKIPQ8TAP9 179 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 HMGB4Q8WW32 186 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 ZNF347Q96SE7 839 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 PIMREGQ9BSJ6 248 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 RTKNQ9BST9 563 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 POT1Q9NUX5 634 aa5.38□□□□□ -1.55
CDC27-216ENST00000574304 CYP3A7-CYP3A51PA0A087WV96 503 aa5.37□□□□□ -1.55
CDC27-216ENST00000574304 TRBV5-3A0A0A0MS03 114 aa5.37□□□□□ -1.55
CDC27-216ENST00000574304 SLC38A8A6NNN8 435 aa5.37□□□□□ -1.55
CDC27-216ENST00000574304 F5H423 210 aaPredicted RBP5.37□□□□□ -1.55
CDC27-216ENST00000574304 TRIM38O00635 465 aa5.37□□□□□ -1.55
CDC27-216ENST00000574304 ALDOCP09972 364 aaKnown RBP5.37□□□□□ -1.55
CDC27-216ENST00000574304 CYP3A7P24462 503 aa5.37□□□□□ -1.55
CDC27-216ENST00000574304 CCT4P50991 539 aaKnown RBP5.37□□□□□ -1.55
CDC27-216ENST00000574304 RNASELQ05823 741 aaKnown RBP5.37□□□□□ -1.55
CDC27-216ENST00000574304 TWIST1Q15672 202 aa5.37□□□□□ -1.55
CDC27-216ENST00000574304 MIDNQ504T8 468 aa5.37□□□□□ -1.55
CDC27-216ENST00000574304 TMEM88Q6PEY1 159 aa5.37□□□□□ -1.55
CDC27-216ENST00000574304 MYLK4Q86YV6 388 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms