RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 HLA-EP13747 358 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 HLA-FP30511 346 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 SLC19A1P41440 591 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 RPS24P62847 133 aaKnown RBP10.37□□□□□ -0.75
RPA1-206ENST00000573994 RPL6Q02878 288 aaKnown RBP10.37□□□□□ -0.75
RPA1-206ENST00000573994 BYSLQ13895 437 aaKnown RBP10.37□□□□□ -0.75
RPA1-206ENST00000573994 ZNF234Q14588 700 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 STARD3Q14849 445 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 FUT11Q495W5 492 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 PTPN20Q4JDL3 420 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 FNDC3BQ53EP0 1204 aaKnown RBP10.37□□□□□ -0.75
RPA1-206ENST00000573994 TCP11X2Q5H9J9 407 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 PIK3R6Q5UE93 754 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 TAF3Q5VWG9 929 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 DPY19L2P1Q6NXN4 242 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 FAM183BPQ6ZVS7 135 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 TMEM110Q86TL2 294 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 UNC45BQ8IWX7 931 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 ZNF366Q8N895 744 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 HJURPQ8NCD3 748 aaPredicted RBP10.37□□□□□ -0.75
RPA1-206ENST00000573994 STK32AQ8WU08 396 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 UCMAQ8WVF2 138 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 TMA16Q96EY4 203 aaKnown RBP10.37□□□□□ -0.75
RPA1-206ENST00000573994 PPP1R13BQ96KQ4 1090 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 MRGPRX1Q96LB2 322 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 EDEM2Q9BV94 578 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 FAM204AQ9H8W3 233 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 ELOVL2Q9NXB9 296 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 COX16Q9P0S2 106 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 THAP10Q9P2Z0 257 aaPredicted RBP10.37□□□□□ -0.75
RPA1-206ENST00000573994 GGA2Q9UJY4 613 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 TLR6Q9Y2C9 796 aa10.37□□□□□ -0.75
RPA1-206ENST00000573994 IGHV1OR15-9A0A0B4J2B8 117 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 IRAK2O43187 625 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 SYNCRIPO60506 623 aaKnown RBP10.36□□□□□ -0.75
RPA1-206ENST00000573994 TRUB2O95900 331 aaKnown RBP10.36□□□□□ -0.75
RPA1-206ENST00000573994 APOEP02649 317 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 EPHX1P07099 455 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 PABPC1P11940 636 aaKnown RBP10.36□□□□□ -0.75
RPA1-206ENST00000573994 EEF1GP26641 437 aaKnown RBP10.36□□□□□ -0.75
RPA1-206ENST00000573994 CD70P32970 193 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 CLCN1P35523 988 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 KRT9P35527 623 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 NUMBP49757 651 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 KLK7P49862 253 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 ARID5AQ03989 594 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 PTK2Q05397 1052 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 RING1Q06587 406 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 KCNMA1Q12791 1236 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 NNTQ13423 1086 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 DRAP1Q14919 205 aaPredicted RBP10.36□□□□□ -0.75
RPA1-206ENST00000573994 EIF4HQ15056 248 aaKnown RBP10.36□□□□□ -0.75
RPA1-206ENST00000573994 KRT31Q15323 416 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 DCAF6Q58WW2 860 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 ZC3H12AQ5D1E8 599 aaKnown RBP10.36□□□□□ -0.75
RPA1-206ENST00000573994 STPG1Q5TH74 334 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 KLHDC7AQ5VTJ3 777 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 LYSMD4Q5XG99 296 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 RAP1GAP2Q684P5 730 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 OR6B2Q6IFH4 312 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 SERPINA13PQ6UXR4 307 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 CHST9Q7L1S5 443 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 CHSY1Q86X52 802 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 MFN1Q8IWA4 741 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 FAM71AQ8IYT1 594 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 CFAP52Q8N1V2 620 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 WDTC1Q8N5D0 677 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 SLC39A13Q96H72 371 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 RTKNQ9BST9 563 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 SLC2A11Q9BYW1 496 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 SLC6A16Q9GZN6 736 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 SYNCQ9H7C4 482 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 POPDC2Q9HBU9 364 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 PCDHGC3Q9UN70 934 aa10.36□□□□□ -0.75
RPA1-206ENST00000573994 LNP1A1A4G5 178 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 F8VZ95 297 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 GOLGA6L22H0YM25 854 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 TIMM44O43615 452 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 HSF2BPO75031 334 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 IGLV3-25P01717 112 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 TACR2P21452 398 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 ITPKAP23677 461 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 SNX16P57768 344 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 YWHAZP63104 245 aaKnown RBP10.35□□□□□ -0.75
RPA1-206ENST00000573994 SPDYCQ5MJ68 293 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 CDKAL1Q5VV42 579 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 MBLAC2Q68D91 279 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 RNF43Q68DV7 783 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 IL31Q6EBC2 164 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 OLFML1Q6UWY5 402 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 MMS22LQ6ZRQ5 1243 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 RBM43Q6ZSC3 357 aaKnown RBP10.35□□□□□ -0.75
RPA1-206ENST00000573994 BEND5Q7L4P6 421 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 ADIPOR2Q86V24 386 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 CIR1Q86X95 450 aaPredicted RBP10.35□□□□□ -0.75
RPA1-206ENST00000573994 LGI2Q8N0V4 545 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 DEFB106AQ8N104 65 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 AHI1Q8N157 1196 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 CARNMT1Q8N4J0 409 aa10.35□□□□□ -0.75
RPA1-206ENST00000573994 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms