RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 YJEFN3A6XGL0 299 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 E7ENQ6 273 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 NEDD8-MDP1E9PL57 170 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 TRIM24O15164 1050 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 RPP40O75818 363 aaKnown RBP7.77□□□□□ -1.17
NUP88-205ENST00000572809 KLF8O95600 359 aaPredicted RBP7.77□□□□□ -1.17
NUP88-205ENST00000572809 APBB3O95704 486 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 CALCAP01258 141 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 KLKB1P03952 638 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 KRT5P13647 590 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 TYRP14679 529 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 SLC9A1P19634 815 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 KIR2DL1P43626 348 aaPredicted RBP7.77□□□□□ -1.17
NUP88-205ENST00000572809 CHRNA4P43681 627 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 MTIF2P46199 727 aaKnown RBP7.77□□□□□ -1.17
NUP88-205ENST00000572809 RGS7P49802 495 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 IDH3AP50213 366 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 DGKEP52429 567 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 MFAP3P55082 362 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 KDSRQ06136 332 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 SPEM2Q0P670 501 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 ADIGQ0VDE8 80 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 DOC2BQ14184 412 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 CRY1Q16526 586 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 HSF5Q4G112 596 aaPredicted RBP7.77□□□□□ -1.17
NUP88-205ENST00000572809 EOGTQ5NDL2 527 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 ALG1LQ6GMV1 187 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 PMF1Q6P1K2 205 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 GBP6Q6ZN66 633 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 ENOSF1Q7L5Y1 443 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.77□□□□□ -1.17
NUP88-205ENST00000572809 DENND1CQ8IV53 801 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 SFTPA1Q8IWL2 248 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 SCML4Q8N228 414 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 ALLCQ8N6M5 410 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 GOLGA6L1Q8N7Z2 621 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 IL17RCQ8NAC3 791 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 TXNDC5Q8NBS9 432 aaKnown RBP7.77□□□□□ -1.17
NUP88-205ENST00000572809 TSTD1Q8NFU3 115 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 GAB3Q8WWW8 586 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 HSFY1Q96LI6 401 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 FAM81BQ96LP2 452 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 ZSWIM1Q9BR11 485 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 CRACR2AQ9BSW2 395 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 NUP62CLQ9H1M0 184 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 GPAMQ9HCL2 828 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 CNGB3Q9NQW8 809 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 LMBRD1Q9NUN5 540 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 MARK1Q9P0L2 795 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 MARCH2Q9P0N8 246 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 MMP17Q9ULZ9 603 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.77□□□□□ -1.17
NUP88-205ENST00000572809 CNTN6Q9UQ52 1028 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 STARD13Q9Y3M8 1113 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 MYOFQ9NZM1 2061 aa7.77□□□□□ -1.17
NUP88-205ENST00000572809 EP300Q09472 2414 aaPredicted RBP7.76□□□□□ -1.17
NUP88-205ENST00000572809 GTPBP10A4D1E9 387 aaKnown RBP7.76□□□□□ -1.17
NUP88-205ENST00000572809 M0QYV0 167 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 SGK1O00141 431 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 PIK3R2O00459 728 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 MED7O43513 233 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 CACNG3O60359 315 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 ALDH1A2O94788 518 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 LETM1O95202 739 aaPredicted RBP7.76□□□□□ -1.17
NUP88-205ENST00000572809 CISD3P0C7P0 127 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 TGM1P22735 817 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 MSX1P28360 303 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 ERCC5P28715 1186 aaPredicted RBP7.76□□□□□ -1.17
NUP88-205ENST00000572809 CORO1AP31146 461 aaKnown RBP7.76□□□□□ -1.17
NUP88-205ENST00000572809 GPD2P43304 727 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 HARS2P49590 506 aaKnown RBP7.76□□□□□ -1.17
NUP88-205ENST00000572809 DGKGP49619 791 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 ARSDP51689 593 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 ZNF132P52740 706 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 DAOAP59103 153 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 TRIP4Q15650 581 aaPredicted RBP7.76□□□□□ -1.17
NUP88-205ENST00000572809 ARHGAP44Q17R89 818 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 EXOC3L4Q17RC7 722 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 USP39Q53GS9 565 aaKnown RBP7.76□□□□□ -1.17
NUP88-205ENST00000572809 CT47A1Q5JQC4 288 aaPredicted RBP7.76□□□□□ -1.17
NUP88-205ENST00000572809 C10orf76Q5T2E6 689 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 GRAMD4Q6IC98 578 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 SDE2Q6IQ49 451 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 GJB7Q6PEY0 223 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 TRIM65Q6PJ69 517 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 BHLHA9Q7RTU4 235 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 KBTBD6Q86V97 674 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 FMNL3Q8IVF7 1028 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 FAM114A1Q8IWE2 563 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 PGBD3Q8N328 593 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 ZNF513Q8N8E2 541 aaPredicted RBP7.76□□□□□ -1.17
NUP88-205ENST00000572809 TERB1Q8NA31 727 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 ZNF606Q8WXB4 792 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 IRGQQ8WZA9 623 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 GOLGA1Q92805 767 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 BHMTQ93088 406 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 PLD4Q96BZ4 506 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 LOXL4Q96JB6 756 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 ZC3H10Q96K80 434 aaKnown RBP7.76□□□□□ -1.17
NUP88-205ENST00000572809 THAP9Q9H5L6 903 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms