RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 FYTTD1Q96QD9 318 aaKnown RBP4.72□□□□□ -1.65
NUP88-202ENST00000570937 THUMPD2Q9BTF0 503 aaKnown RBP4.72□□□□□ -1.65
NUP88-202ENST00000570937 SNX15Q9NRS6 342 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 TBC1D23Q9NUY8 699 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 MGAT4CQ9UBM8 478 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 HPSEQ9Y251 543 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 ZBTB1Q9Y2K1 713 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 USP16Q9Y5T5 823 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 ADAMTS7Q9UKP4 1686 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 CASZ1Q86V15 1759 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 QSER1Q2KHR3 1735 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 USP42Q9H9J4 1324 aaKnown RBP4.72□□□□□ -1.65
NUP88-202ENST00000570937 A0A1W2PPC4 97 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 H3BNC9 293 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 SNX2O60749 519 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 USP1O94782 785 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 MT-CO3P00414 261 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 HOXB7P09629 217 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 APEHP13798 732 aaKnown RBP4.71□□□□□ -1.66
NUP88-202ENST00000570937 FGFR2P21802 821 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 MCM5P33992 734 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 GNALP38405 381 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 ABCG1P45844 678 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 ALDH5A1P51649 535 aaPredicted RBP4.71□□□□□ -1.66
NUP88-202ENST00000570937 FAM187BQ17R55 369 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 CERKLQ49MI3 558 aaPredicted RBP4.71□□□□□ -1.66
NUP88-202ENST00000570937 KIF6Q6ZMV9 814 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 SMIM5Q71RC9 77 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 C1QL2Q7Z5L3 287 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 NEK8Q86SG6 692 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 WDR63Q8IWG1 891 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 FAM9BQ8IZU0 186 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 METTL25Q8N6Q8 603 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 MBD3L2Q8NHZ7 208 aaPredicted RBP4.71□□□□□ -1.66
NUP88-202ENST00000570937 ZNF398Q8TD17 642 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 C1QTNF7Q9BXJ2 289 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 HEYLQ9NQ87 328 aaPredicted RBP4.71□□□□□ -1.66
NUP88-202ENST00000570937 MYO1AQ9UBC5 1043 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 DBF4Q9UBU7 674 aaPredicted RBP4.71□□□□□ -1.66
NUP88-202ENST00000570937 LPAR3Q9UBY5 353 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 FAM50BQ9Y247 325 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 SLC27A6Q9Y2P4 619 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 TAF1LQ8IZX4 1826 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 KCPQ6ZWJ8 1503 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 ZNF804BA4D1E1 1349 aa4.71□□□□□ -1.66
NUP88-202ENST00000570937 ANO9A1A5B4 782 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 POM121BA6NF01 834 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 ERVV-1B6SEH8 477 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 CCER2I3L3R5 266 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 KPNA5O15131 536 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 PMM2O15305 246 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 SERPINB2P05120 415 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 PRR35P0CG20 571 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 CYP2A6P11509 494 aaPredicted RBP4.7□□□□□ -1.66
NUP88-202ENST00000570937 EIF2S2P20042 333 aaKnown RBP4.7□□□□□ -1.66
NUP88-202ENST00000570937 RBL1P28749 1068 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 EPHB2P29323 1055 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 TM4SF1P30408 202 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 NTSR1P30989 418 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 HTR7P34969 479 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 PRIM2P49643 509 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 CFHR3Q02985 330 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 IFIT5Q13325 482 aaKnown RBP4.7□□□□□ -1.66
NUP88-202ENST00000570937 FHL3Q13643 280 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 LARS2Q15031 903 aaKnown RBP4.7□□□□□ -1.66
NUP88-202ENST00000570937 SRSF7Q16629 238 aaKnown RBP eCLIP4.7□□□□□ -1.66
NUP88-202ENST00000570937 CCDC184Q52MB2 194 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 CEP78Q5JTW2 689 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 USP17L6PQ6QN14 398 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 SERPINA13PQ6UXR4 307 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 GALNT16Q8N428 558 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 PNPLA1Q8N8W4 532 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 SUN3Q8TAQ9 357 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 KAZALD1Q96I82 304 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 CCDC17Q96LX7 622 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 NAA15Q9BXJ9 866 aaKnown RBP4.7□□□□□ -1.66
NUP88-202ENST00000570937 ZBTB26Q9HCK0 441 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 STARD7Q9NQZ5 370 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 HYPKQ9NX55 129 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 SRP68Q9UHB9 627 aaKnown RBP4.7□□□□□ -1.66
NUP88-202ENST00000570937 IL16Q14005 1332 aa4.7□□□□□ -1.66
NUP88-202ENST00000570937 UBR3Q6ZT12 1888 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 CARMIL3Q8ND23 1372 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 CICQ96RK0 1608 aaPredicted RBP4.69□□□□□ -1.66
NUP88-202ENST00000570937 H0YIN7 160 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 CAMTA2O94983 1202 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 CYP2D6P10635 497 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 MYL4P12829 197 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 MYL6BP14649 208 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 ATF7P17544 494 aaPredicted RBP4.69□□□□□ -1.66
NUP88-202ENST00000570937 ADRA1DP25100 572 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 STT3AP46977 705 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 TM4SF4P48230 202 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 ACOX1Q15067 660 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 HSP90AB3PQ58FF7 597 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 KLHDC7AQ5VTJ3 777 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 CLEC9AQ6UXN8 241 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 ZNF813Q6ZN06 617 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 BEND5Q7L4P6 421 aa4.69□□□□□ -1.66
NUP88-202ENST00000570937 NBPF5PQ86XG9 351 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms